You are here

ATCC10864_008376-T1, ATCC10864_008376-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008376-T1
Unique NameATCC10864_008376-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:477633..478348-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008376-T1 ID=ATCC10864_008376-T1|Name=ATCC10864_008376-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=716bp|location=Sequence derived from alignment at MCQH01000199:477633..478348- (Aspergillus niger ATCC 10864)
ATGCAATTTCGCTACTCGACCGGCACCTCCAACCCATTTACCTTCCCCTG GGAAGCTGGCATTCCCAACACCCCATTCTGGGACACGTTCTCCTTCAGCC AAGCGGCCTGTATCTTAAAGGCCCTCCCTCCCATTGAGCTAGGAATACGA CCTCGACGCGCGCTACGGCTCCTCAGCAAGCCAACCAGAGAAAATGGCCG TTATCCTCGACATCCCTCCAAGAAAAGATCAAACACGAGGAAGCCAGATA CACTCTCCCAGACAACTTCCATAACGCTGATCATACCCTCTACAGACGTT TCTGGCTTGCTGTCGCCAGCGTCAGCGTAGCCTTAGGACAAACGGACAAG GCGGAGGCCGCGTATCGAACGCTCGTTACTAATAGAGAGGACAAGAATGA TCTGGTGCCTGTTTTCAGCCTCTCAGGCTTTTTGATTCATTATGGTACTA CGAGCAAAGTTCAAGAGGGTTTGGGATTGACTGGATCTTGTTTGGAGTGG TTGGATAAGAAGCTGGGCAGGGCATCGCCGCAGGGTATTGAGGTGATGGG GAATATTGCGGAGGCAGAGTGGAAGATGGGAAGAAGGGAAGAGGCGGAGG GGATGATCAAGGAGGCACATGAGTGTATTGATGAATTGGAGGGGACGAAG TTTGCTGTGTATGAGGATGATGAGAGGGAGTTTACGCAGGAGTGGGAGAA GGGGCTGAGGGAATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000199:477633..478348-

>ATCC10864_008376-T1 ID=ATCC10864_008376-T1|Name=ATCC10864_008376-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1320bp|location=Sequence derived from alignment at MCQH01000199:477633..478348- (Aspergillus niger ATCC 10864)
GAATACGACCTCGACGCGCGCTACGGCTCCTCAGCAAGCCAACCAGAGAA
AATGGCCGTTATCCTCGACATCCCTCCAAGAAAAGATCAAACACGAGGAA
GCCAGATACACTCTCCCAGACAACTTCCATAACGCTGATCATACCCTCTA
CAGACGTTTCTGGCTTGCTGTCGCCAGCGTCAGCGTAGCCTTAGGACAAA
CGGACAAGGCGGAGGCCGCGTATCGAACGCTCGTTACTAATAGAGAGGAC
AAGAATGATCTGGTGCCTGTTTTCAGCCTCTCAGGCTTTTTGATTCATTA
TGGTACTACGAGCAAAGTTCAAGAGGGTTTGGGATTGACTGGATCTTGTT
TGGAGTGGTTGGATAAGAAGCTGGGCAGGGCATCGCCGCAGGGTATTGAG
GTGATGGGGAATATTGCGGAGGCAGAGTGGAAGATGGGAAGAAGGGAAGA
GGCGGAGGGGATGATCAAGGAGGCACATGAGTGTATTGATGAATTGGAGG
GGACGAAGTTTGCTGTGTATGAGGATGATGAGAGGGAGTTTACGCAGGAG
TGGGAGAAGGGGCTGAGGGAATAGATGCAATTTCGCTACTCGACCGGCAC
CTCCAACCCATTTACCTTCCCCTGGGAAGCTGGCATTCCCAACACCCCAT
TCTGGGACACGAATACGACCTCGACGCGCGCTACGGCTCCTCAGCAAGCC
AACCAGAGAAAATGGCCGTTATCCTCGACATCCCTCCAAGAAAAGATCAA
ACACGAGGAAGCCAGATACACTCTCCCAGACAACTTCCATAACGCTGATC
ATACCCTCTACAGACGTTTCTGGCTTGCTGTCGCCAGCGTCAGCGTAGCC
TTAGGACAAACGGACAAGGCGGAGGCCGCGTATCGAACGCTCGTTACTAA
TAGAGAGGACAAGAATGATCTGGTGCCTGTTTTCAGCCTCTCAGGCTTTT
TGATTCATTATGGTACTACGAGCAAAGTTCAAGAGGGTTTGGGATTGACT
GGATCTTGTTTGGAGTGGTTGGATAAGAAGCTGGGCAGGGCATCGCCGCA
GGGTATTGAGGTGATGGGGAATATTGCGGAGGCAGAGTGGAAGATGGGAA
GAAGGGAAGAGGCGGAGGGGATGATCAAGGAGGCACATGAGTGTATTGAT
GAATTGGAGGGGACGAAGTTTGCTGTGTATGAGGATGATGAGAGGGAGTT
TACGCAGGAGTGGGAGAAGGGGCTGAGGGAATAGATGCAATTTCGCTACT
CGACCGGCACCTCCAACCCATTTACCTTCCCCTGGGAAGCTGGCATTCCC
AACACCCCATTCTGGGACAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008376ATCC10864_008376Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008376-T1ATCC10864_008376-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008376-T1.cdsATCC10864_008376-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008376-T1.exon2ATCC10864_008376-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008376-T1.exon1ATCC10864_008376-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR011990
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:477633..478348 -