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ATCC10864_008386-T1, ATCC10864_008386-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008386-T1
Unique NameATCC10864_008386-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:516988..518856+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008386-T1 ID=ATCC10864_008386-T1|Name=ATCC10864_008386-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1869bp|location=Sequence derived from alignment at MCQH01000199:516988..518856+ (Aspergillus niger ATCC 10864)
ATGTATCGACCCTCAGAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCA
GAACTCTGAACGTCTCGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTAC
AGTTTCAGGCCAATTCAGATACGATTTACTATCCGATCCCTTTCAAGGTC
ACCGAAACCCTGGCAGCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCT
AATAGCGGATCTGCAGTCAGCATCTAAGCCACATGAACGGAAGACTACAA
TCAACCTGGAAAGGGCAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAG
ATCAATGGGTACTCCCGATCCGACCCTAAGGTCAAACGATACATGAAAGG
TAAGCCGCTCTCTTTTTCCTAGTGCAGGGAGCAGGAATTGACGAGACGAA
GATACCGATATCCATGCTGCACAATCAAATCCGTATCGGCGAATGGCAGC
CAGTATGTACCGGACCAAGCATGATAACGAGTTCTTTCATCTGCATGGCT
CTTTGAACCCAACTTCCACTCTGAAAATGCTCGGTTTAGACAGCCACCGC
GCGGATCTCACTGACTACGATGAGATCATAAACACTATTCAGAGCCAGGT
TCAAAAGTTCTCAGCAGCTGAGCTAGAGAGACTCAACGAGACGAATCGGC
AAGCAGGGGTGACGGTGTACGAGTATGAAGAATTCAAAAACACTCCCCAT
GTAAGGTGACCCTCGCAGCTCACACGGACAGAAAACCAAGATATACTCAT
ATTGTGAACAGGGTAGAACGAATATAGAGGAACCTTGGTGGAAGGTTATG
CGCCTGCCAGGGAAGACACCGCCAGCCGCTTTCAACCCTAGTGGAAGTCA
TAGGATACTCGAAGGTGTCAAGGTCTTGGAGCTCTGTTGTGTCATTGCAG
GGCCCATGATCGGTCGTACATTAGCTGAATACGGAGCGGATGTTTTGAAG
GTTACATCTCCAACGGTGCCTGACGTACCATTCTTTCAGGTCGACAATAA
CATGGGCAAGCGTGCTGTGGAATTAGATCTCAAGGCTGATGAGGATCGCC
GCCATTTCGAAGCCCTTCTCGCTGATGTCGATGTGATCATTGATGGGTAC
CGCCCTGGCGCCCTTCGAAAACTTGGATACAGCCCAGAAACTATGGCTGC
CATGGCAGAGAAGCGTGGGAAAGGGATCGTCTACATAGACGAAACCTGCT
TTGGGCACGAAGGTGAGTGGTGCCATCGCCCAGGATGGCAACAGATAGCC
GATTGCGTATGTAACACACCCAAATGAGCTTTGCAGGGACACTCTCCTAT
TAAAACTGACTTGCAAATAGCTCACCGGATTTGCAAGGTGTCATGGGCGA
TTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCGTTGCCTATAGCTGA
CTCTGGTGCCGGTTGCATGGGTGCCATCGCTGCCTTGACGGGCCTTTACA
ATCGTATACGATACGGCGGATCGTATATTGGTCAGGTTTCCTTGATGCAG
TTCAACTTACTGCTCTTTGCTGTCGGCCAATATCCGAACTCTACAGAGTC
ACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAAGTTACGCTTCTGCG
ACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGGTCATGAGGGAACGG
TTTCCACACCTCTTTGTGGAACCATCCCCAGGGGATCGCCAGAATAGTCT
GACAGAGATATGGTACTCTCATCACTACGGAGCGGACGTGGAAGTTGTAC
GACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCTTTGCTCGTGCAACT
CGACCAAACGGTGCAGATGCATCTCCATCCTGGGATTTCCCGCAGGAACA
GGGTTCCCGGAAGCTTTAG
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Coding sequence (CDS) from alignment at MCQH01000199:516988..518856+

>ATCC10864_008386-T1 ID=ATCC10864_008386-T1|Name=ATCC10864_008386-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6768bp|location=Sequence derived from alignment at MCQH01000199:516988..518856+ (Aspergillus niger ATCC 10864)
ATGTATCGACCCTCAGAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCA
GAACTCTGAACGTCTCGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTAC
AGTTTCAGGCCAATTCAGATACGATTTACTATCCGATCCCTTTCAAGGTC
ACCGAAACCCTGGCAGCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCT
AATAGCGGATCTGCAGTCAGCATCTAAGCCACATGAACGGAAGACTACAA
TCAACCTGGAAAGGGCAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAG
ATCAATGGGTACTCCCGATCCGACCCTAAGGTCAAACGATACATGAAAGA
TACCGATATCCATGCTGCACAATCAAATCCGTATCGGCGAATGGCAGCCA
GTATGTACCGGACCAAGCATGATAACGAGTTCTTTCATCTGCATGGCTCT
TTGAACCCAACTTCCACTCTGAAAATGCTCGGTTTAGACAGCCACCGCGC
GGATCTCACTGACTACGATGAGATCATAAACACTATTCAGAGCCAGGTTC
AAAAGTTCTCAGCAGCTGAGCTAGAGAGACTCAACGAGACGAATCGGCAA
GCAGGGGTGACGGTGTACGAGTATGAAGAATTCAAAAACACTCCCCATGG
TAGAACGAATATAGAGGAACCTTGGTGGAAGGTTATGCGCCTGCCAGGGA
AGACACCGCCAGCCGCTTTCAACCCTAGTGGAAGTCATAGGATACTCGAA
GGTGTCAAGGTCTTGGAGCTCTGTTGTGTCATTGCAGGGCCCATGATCGG
TCGTACATTAGCTGAATACGGAGCGGATGTTTTGAAGGTTACATCTCCAA
CGGTGCCTGACGTACCATTCTTTCAGGTCGACAATAACATGGGCAAGCGT
GCTGTGGAATTAGATCTCAAGGCTGATGAGGATCGCCGCCATTTCGAAGC
CCTTCTCGCTGATGTCGATGTGATCATTGATGGGTACCGCCCTGGCGCCC
TTCGAAAACTTGGATACAGCCCAGAAACTATGGCTGCCATGGCAGAGAAG
CGTGGGAAAGGGATCGTCTACATAGACGAAACCTGCTTTGGGCACGAAGG
TGAGTGGTGCCATCGCCCAGGATGGCAACAGATAGCCGATTGCCTCACCG
GATTTGCAAGGTGTCATGGGCGATTCCTTGGCCGTGCGGCGGAACCGATG
GTATCCCCGTTGCCTATAGCTGACTCTGGTGCCGGTTGCATGGGTGCCAT
CGCTGCCTTGACGGGCCTTTACAATCGTATACGATACGGCGGATCGTATA
TTGGTCAGGTTTCCTTGATGCAGTTCAACTTACTGCTCTTTGCTGTCGGC
CAATATCCGAACTCTACAGAGTCACAGCTGCAGCATGCCTTTGCTCCTGC
ATTTTCCAAGTTACGCTTCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGG
CATTAGAGGTCATGAGGGAACGGTTTCCACACCTCTTTGTGGAACCATCC
CCAGGGGATCGCCAGAATAGTCTGACAGAGATATGGTACTCTCATCACTA
CGGAGCGGACGTGGAAGTTGTACGACCTGTAGCTGAGATCGAGGGAGTCG
AGAACGGCTTTGCTCGTGCAACTCGACCAAACGGTGCAGATGCATCTCCA
TCCTGGGATTTCCCGCAGGAACAGGGTTCCCGGAAGCTTTAGATGTATCG
ACCCTCAGAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCAGAACTCTG
AACGTCTCGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTACAGTTTCAG
GCCAATTCAGATACGATTTACTATCCGATCCCTTTCAAGGTCACCGAAAC
CCTGGCAGCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCTAATAGCGG
ATCTGCAGTCAGCATCTAAGCCACATGAACGGAAGACTACAATCAACCTG
GAAAGGGCAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAGATCAATGG
GTACTCCCGATCCGACCCTAAGGTCAAACGATACATGAAAGATACCGATA
TCCATGCTGCACAATCAAATCCGTATCGGCGAATGGCAGCCAGTATGTAC
CGGACCAAGCATGATAACGAGTTCTTTCATCTGCATGGCTCTTTGAACCC
AACTTCCACTCTGAAAATGCTCGGTTTAGACAGCCACCGCGCGGATCTCA
CTGACTACGATGAGATCATAAACACTATTCAGAGCCAGGTTCAAAAGTTC
TCAGCAGCTGAGCTAGAGAGACTCAACGAGACGAATCGGCAAGCAGGGGT
GACGGTGTACGAGTATGAAGAATTCAAAAACACTCCCCATGGTAGAACGA
ATATAGAGGAACCTTGGTGGAAGGTTATGCGCCTGCCAGGGAAGACACCG
CCAGCCGCTTTCAACCCTAGTGGAAGTCATAGGATACTCGAAGGTGTCAA
GGTCTTGGAGCTCTGTTGTGTCATTGCAGGGCCCATGATCGGTCGTACAT
TAGCTGAATACGGAGCGGATGTTTTGAAGGTTACATCTCCAACGGTGCCT
GACGTACCATTCTTTCAGGTCGACAATAACATGGGCAAGCGTGCTGTGGA
ATTAGATCTCAAGGCTGATGAGGATCGCCGCCATTTCGAAGCCCTTCTCG
CTGATGTCGATGTGATCATTGATGGGTACCGCCCTGGCGCCCTTCGAAAA
CTTGGATACAGCCCAGAAACTATGGCTGCCATGGCAGAGAAGCGTGGGAA
AGGGATCGTCTACATAGACGAAACCTGCTTTGGGCACGAAGGTGAGTGGT
GCCATCGCCCAGGATGGCAACAGATAGCCGATTGCCTCACCGGATTTGCA
AGGTGTCATGGGCGATTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCC
GTTGCCTATAGCTGACTCTGGTGCCGGTTGCATGGGTGCCATCGCTGCCT
TGACGGGCCTTTACAATCGTATACGATACGGCGGATCGTATATTGGTCAG
GTTTCCTTGATGCAGTTCAACTTACTGCTCTTTGCTGTCGGCCAATATCC
GAACTCTACAGAGTCACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCA
AGTTACGCTTCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAG
GTCATGAGGGAACGGTTTCCACACCTCTTTGTGGAACCATCCCCAGGGGA
TCGCCAGAATAGTCTGACAGAGATATGGTACTCTCATCACTACGGAGCGG
ACGTGGAAGTTGTACGACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGC
TTTGCTCGTGCAACTCGACCAAACGGTGCAGATGCATCTCCATCCTGGGA
TTTCCCGCAGGAACAGGGTTCCCGGAAGCTTTAGATGTATCGACCCTCAG
AAGAGGCAAGAAGAATTTACGATCTTCTTTGCCAGAACTCTGAACGTCTC
GGTCTCCCAAGCGAGATCTATAGTAGCCGAGTACAGTTTCAGGCCAATTC
AGATACGATTTACTATCCGATCCCTTTCAAGGTCACCGAAACCCTGGCAG
CTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCTAATAGCGGATCTGCAG
TCAGCATCTAAGCCACATGAACGGAAGACTACAATCAACCTGGAAAGGGC
AACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAGATCAATGGGTACTCCC
GATCCGACCCTAAGGTCAAACGATACATGAAAGATACCGATATCCATGCT
GCACAATCAAATCCGTATCGGCGAATGGCAGCCAGTATGTACCGGACCAA
GCATGATAACGAGTTCTTTCATCTGCATGGCTCTTTGAACCCAACTTCCA
CTCTGAAAATGCTCGGTTTAGACAGCCACCGCGCGGATCTCACTGACTAC
GATGAGATCATAAACACTATTCAGAGCCAGGTTCAAAAGTTCTCAGCAGC
TGAGCTAGAGAGACTCAACGAGACGAATCGGCAAGCAGGGGTGACGGTGT
ACGAGTATGAAGAATTCAAAAACACTCCCCATGGTAGAACGAATATAGAG
GAACCTTGGTGGAAGGTTATGCGCCTGCCAGGGAAGACACCGCCAGCCGC
TTTCAACCCTAGTGGAAGTCATAGGATACTCGAAGGTGTCAAGGTCTTGG
AGCTCTGTTGTGTCATTGCAGGGCCCATGATCGGTCGTACATTAGCTGAA
TACGGAGCGGATGTTTTGAAGGTTACATCTCCAACGGTGCCTGACGTACC
ATTCTTTCAGGTCGACAATAACATGGGCAAGCGTGCTGTGGAATTAGATC
TCAAGGCTGATGAGGATCGCCGCCATTTCGAAGCCCTTCTCGCTGATGTC
GATGTGATCATTGATGGGTACCGCCCTGGCGCCCTTCGAAAACTTGGATA
CAGCCCAGAAACTATGGCTGCCATGGCAGAGAAGCGTGGGAAAGGGATCG
TCTACATAGACGAAACCTGCTTTGGGCACGAAGGTGAGTGGTGCCATCGC
CCAGGATGGCAACAGATAGCCGATTGCCTCACCGGATTTGCAAGGTGTCA
TGGGCGATTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCGTTGCCTA
TAGCTGACTCTGGTGCCGGTTGCATGGGTGCCATCGCTGCCTTGACGGGC
CTTTACAATCGTATACGATACGGCGGATCGTATATTGGTCAGGTTTCCTT
GATGCAGTTCAACTTACTGCTCTTTGCTGTCGGCCAATATCCGAACTCTA
CAGAGTCACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAAGTTACGC
TTCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGGTCATGAG
GGAACGGTTTCCACACCTCTTTGTGGAACCATCCCCAGGGGATCGCCAGA
ATAGTCTGACAGAGATATGGTACTCTCATCACTACGGAGCGGACGTGGAA
GTTGTACGACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCTTTGCTCG
TGCAACTCGACCAAACGGTGCAGATGCATCTCCATCCTGGGATTTCCCGC
AGGAACAGGGTTCCCGGAAGCTTTAGATGTATCGACCCTCAGAAGAGGCA
AGAAGAATTTACGATCTTCTTTGCCAGAACTCTGAACGTCTCGGTCTCCC
AAGCGAGATCTATAGTAGCCGAGTACAGTTTCAGGCCAATTCAGATACGA
TTTACTATCCGATCCCTTTCAAGGTCACCGAAACCCTGGCAGCTCTCAAG
GGAATAGAAGGAGCCCTGGCAGCTCTAATAGCGGATCTGCAGTCAGCATC
TAAGCCACATGAACGGAAGACTACAATCAACCTGGAAAGGGCAACGCTTT
TCGGCTTTCAGGCACTGGCCGCCAAGATCAATGGGTACTCCCGATCCGAC
CCTAAGGTCAAACGATACATGAAAGATACCGATATCCATGCTGCACAATC
AAATCCGTATCGGCGAATGGCAGCCAGTATGTACCGGACCAAGCATGATA
ACGAGTTCTTTCATCTGCATGGCTCTTTGAACCCAACTTCCACTCTGAAA
ATGCTCGGTTTAGACAGCCACCGCGCGGATCTCACTGACTACGATGAGAT
CATAAACACTATTCAGAGCCAGGTTCAAAAGTTCTCAGCAGCTGAGCTAG
AGAGACTCAACGAGACGAATCGGCAAGCAGGGGTGACGGTGTACGAGTAT
GAAGAATTCAAAAACACTCCCCATGGTAGAACGAATATAGAGGAACCTTG
GTGGAAGGTTATGCGCCTGCCAGGGAAGACACCGCCAGCCGCTTTCAACC
CTAGTGGAAGTCATAGGATACTCGAAGGTGTCAAGGTCTTGGAGCTCTGT
TGTGTCATTGCAGGGCCCATGATCGGTCGTACATTAGCTGAATACGGAGC
GGATGTTTTGAAGGTTACATCTCCAACGGTGCCTGACGTACCATTCTTTC
AGGTCGACAATAACATGGGCAAGCGTGCTGTGGAATTAGATCTCAAGGCT
GATGAGGATCGCCGCCATTTCGAAGCCCTTCTCGCTGATGTCGATGTGAT
CATTGATGGGTACCGCCCTGGCGCCCTTCGAAAACTTGGATACAGCCCAG
AAACTATGGCTGCCATGGCAGAGAAGCGTGGGAAAGGGATCGTCTACATA
GACGAAACCTGCTTTGGGCACGAAGGTGAGTGGTGCCATCGCCCAGGATG
GCAACAGATAGCCGATTGCCTCACCGGATTTGCAAGGTGTCATGGGCGAT
TCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCGTTGCCTATAGCTGAC
TCTGGTGCCGGTTGCATGGGTGCCATCGCTGCCTTGACGGGCCTTTACAA
TCGTATACGATACGGCGGATCGTATATTGGTCAGGTTTCCTTGATGCAGT
TCAACTTACTGCTCTTTGCTGTCGGCCAATATCCGAACTCTACAGAGTCA
CAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAAGTTACGCTTCTGCGA
CAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGGTCATGAGGGAACGGT
TTCCACACCTCTTTGTGGAACCATCCCCAGGGGATCGCCAGAATAGTCTG
ACAGAGATATGGTACTCTCATCACTACGGAGCGGACGTGGAAGTTGTACG
ACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCTTTGCTCGTGCAACTC
GACCAAACGGTGCAGATGCATCTCCATCCTGGGATTTCCCGCAGGAACAG
GGTTCCCGGAAGCTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008410CoA-transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008386ATCC10864_008386Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008386-T1.exon1ATCC10864_008386-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008386-T1.exon2ATCC10864_008386-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008386-T1.exon3ATCC10864_008386-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008386-T1.exon4ATCC10864_008386-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008386-T1.cdsATCC10864_008386-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008386-T1ATCC10864_008386-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023606
PFAMPF02515
InterProIPR003673
Properties
Property NameValue
NoteSMCOG1189:L-carnitine dehydratase/bile acid-inducible
NoteantiSMASH:Cluster_1000199.4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:516988..518856 +
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