You are here

Home

ATCC10864_008402-T1, ATCC10864_008402-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008402-T1
Unique NameATCC10864_008402-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:573392..575596+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008402-T1 ID=ATCC10864_008402-T1|Name=ATCC10864_008402-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2205bp|location=Sequence derived from alignment at MCQH01000199:573392..575596+ (Aspergillus niger ATCC 10864)
ATGCGACCTTCACTAGCCTTGGCGAATCTCAGCCTAGTCCCTTATCTTTT
CTCCAACACTGGCGAAGCTAGGATATCCCCCAAGTCTCCACCCTCCATTG
ACCGGGCAGGAGTAGTATCCCGGTTCAATCCTTGCCGCAATGCCAGCTCG
AAGAGCACCCCGATGCAGGTGGGAAATGGGGACTTTGCATTCGGAGCAGA
TATTACGGGGCTACAGACCTTTCTCCCATACGGTATCCTTTCTTCCTGGG
GATGGCATAATTCGTCACTGCCTGCGAACTCCACACCATCGGATTTCACG
GGATTGGACTGGTGGACGCATGATCGGCTAGTGAATTATGATATGCCCAA
TCCTGCAGAGCCAGACATTTCTCAGTGGTTGATTGCAAATCCGCATCGTA
TCAACCTAGGTCGCATCGGATTGGTTTTCGGGGGAGATTACAGCAATTAC
ACTGAAGAAGACCTGCAGAATAAGACGCAAAAACTGGATATTTACCGGGG
TTTTCTGCAGTCAAATTTCACTATTGATGGCCATCTGATCACCATCACCA
CCAGTGTTGATCCAGAATCGGACACGATAGCATTACGCTTGAATTCCGAA
CTGTTGGCGCTAGGCCGTCTAGGGGTCTTCCTTGACTACCCGTATGCTAC
GGACGAGAATAAGTTCGAGGCCCCATTTGTTGGCGATTGGACCGCTGTCT
CAAATCACACGACGGTCTTGCACCATGCAGGAAATGAAAATCAAGCCCAG
GTGCAGCACACTCTCGACAACACCACCTACTACACCACATTACAGTGGCG
TGGTAGTAATGTGTCTATTTCCAGAGTCCCCGATTCTCATCGATACGTCT
TGCAGCCAAACGGGGACCACACAAGAGAATTTGAACTCACAGCAACCTTC
TCTCCTAGAGAGGGCTTTCAATCTTCTTCGCTATCTTTCGATGCAATCAT
TGCACGATCTCAGCAATGGTGGACGGGCTATTGGGAGACCGGAGCCTTCG
TAGATCTGATGGGAGCCGGGAATGCAACGGCAGATGAAATACAACGACGC
GTGATACTGTCCCAATACTTGCTGGCAGTCAATGAGGCCGGACACGATCC
GCCACAAGAATCAGGGTTAGTAAATAACGGATGGTATGGCAAGTTTCACA
TGGAGATGTATCTATGGCATTCTGCTCATTGGACTCCGTGGGGCAAACTC
CCTTTGCTGGAGCGGAGCATCGGTGTCTACAATCGGTTCCTTCCCTCATC
GACGCAAAGGGCAGCCGACCAGGGATACAGCGGCTTGAGATGGGGCAAGA
TGAGCGACCCAAGCGGGAGATCTGCCCCAGGCGAAATCAACGCCCTGCTC
ATATGGCAGCAACCCCATGTCTTTTACTTCGCAGAGACGGAGTATCAGTC
TGCACGGCATGCAGGAAGAAACATGGAAGATGTCCTAGCGAAATGGGACT
ACGTACTGACCGAGTCGGCAGACTTCATGGCATCTTATGCCTTCTGGAAT
ACCTCCACAAACGTATATGATCTCGGTCCTCCGATGTACCCAGTCTCGGA
GAATACACCACCGAACAGCACCCGAAATCCCACCTTCGAGTTGGCATACT
GGCACTTCGGTCTCGACGTAGCCATATCCTGGAAAGCCCGACGTGGCCAG
CAAGCTCCCCAGGCATGGACACACGTCAAAGACAACCTCGCACCATTACC
GATAGTATATGCTGTAAACGAAACAACGGGCGAGAAAGTTCTCACATATA
CACTGTACGAGGGCATCCCAAGCATGTGGACAGACCCTGACACAGTCACC
GATCACCCAGCACTCACTGGCATCTACGGTCTCCTACCCCCCACGGCAGC
GGTGAACCAAACACTCGTATCGGCGACCGCGGCCCAAGTCGCCAGTGATT
GGAACTTTACAACCTGCTGGGGCTGGGACTTTCCCATGCTGGCGATGAAT
GCAGCAAGGCTGGGAGACGTAGACGCCGCAGTGCGGTATCTGGTGCACCC
GAATTTTGAATTTGACGACGTGGGTATGCCAGTGGGGACCAAGGCACCGA
CCCCTTATTTTCCTGGAAGTTCGGCCCTCTTGTTGGCTGTTGCGATGATG
GCTGGGGGTTGGGATGCTGCAACTAACAGCAGTCAGCAGGACTTTGCGCC
CGGGTTTCCGGCCAAATGGAATGTTCGTGCTGAGGGGTTTGGGCAGATGC
TGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000199:573392..575596+

>ATCC10864_008402-T1 ID=ATCC10864_008402-T1|Name=ATCC10864_008402-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2205bp|location=Sequence derived from alignment at MCQH01000199:573392..575596+ (Aspergillus niger ATCC 10864)
ATGCGACCTTCACTAGCCTTGGCGAATCTCAGCCTAGTCCCTTATCTTTT
CTCCAACACTGGCGAAGCTAGGATATCCCCCAAGTCTCCACCCTCCATTG
ACCGGGCAGGAGTAGTATCCCGGTTCAATCCTTGCCGCAATGCCAGCTCG
AAGAGCACCCCGATGCAGGTGGGAAATGGGGACTTTGCATTCGGAGCAGA
TATTACGGGGCTACAGACCTTTCTCCCATACGGTATCCTTTCTTCCTGGG
GATGGCATAATTCGTCACTGCCTGCGAACTCCACACCATCGGATTTCACG
GGATTGGACTGGTGGACGCATGATCGGCTAGTGAATTATGATATGCCCAA
TCCTGCAGAGCCAGACATTTCTCAGTGGTTGATTGCAAATCCGCATCGTA
TCAACCTAGGTCGCATCGGATTGGTTTTCGGGGGAGATTACAGCAATTAC
ACTGAAGAAGACCTGCAGAATAAGACGCAAAAACTGGATATTTACCGGGG
TTTTCTGCAGTCAAATTTCACTATTGATGGCCATCTGATCACCATCACCA
CCAGTGTTGATCCAGAATCGGACACGATAGCATTACGCTTGAATTCCGAA
CTGTTGGCGCTAGGCCGTCTAGGGGTCTTCCTTGACTACCCGTATGCTAC
GGACGAGAATAAGTTCGAGGCCCCATTTGTTGGCGATTGGACCGCTGTCT
CAAATCACACGACGGTCTTGCACCATGCAGGAAATGAAAATCAAGCCCAG
GTGCAGCACACTCTCGACAACACCACCTACTACACCACATTACAGTGGCG
TGGTAGTAATGTGTCTATTTCCAGAGTCCCCGATTCTCATCGATACGTCT
TGCAGCCAAACGGGGACCACACAAGAGAATTTGAACTCACAGCAACCTTC
TCTCCTAGAGAGGGCTTTCAATCTTCTTCGCTATCTTTCGATGCAATCAT
TGCACGATCTCAGCAATGGTGGACGGGCTATTGGGAGACCGGAGCCTTCG
TAGATCTGATGGGAGCCGGGAATGCAACGGCAGATGAAATACAACGACGC
GTGATACTGTCCCAATACTTGCTGGCAGTCAATGAGGCCGGACACGATCC
GCCACAAGAATCAGGGTTAGTAAATAACGGATGGTATGGCAAGTTTCACA
TGGAGATGTATCTATGGCATTCTGCTCATTGGACTCCGTGGGGCAAACTC
CCTTTGCTGGAGCGGAGCATCGGTGTCTACAATCGGTTCCTTCCCTCATC
GACGCAAAGGGCAGCCGACCAGGGATACAGCGGCTTGAGATGGGGCAAGA
TGAGCGACCCAAGCGGGAGATCTGCCCCAGGCGAAATCAACGCCCTGCTC
ATATGGCAGCAACCCCATGTCTTTTACTTCGCAGAGACGGAGTATCAGTC
TGCACGGCATGCAGGAAGAAACATGGAAGATGTCCTAGCGAAATGGGACT
ACGTACTGACCGAGTCGGCAGACTTCATGGCATCTTATGCCTTCTGGAAT
ACCTCCACAAACGTATATGATCTCGGTCCTCCGATGTACCCAGTCTCGGA
GAATACACCACCGAACAGCACCCGAAATCCCACCTTCGAGTTGGCATACT
GGCACTTCGGTCTCGACGTAGCCATATCCTGGAAAGCCCGACGTGGCCAG
CAAGCTCCCCAGGCATGGACACACGTCAAAGACAACCTCGCACCATTACC
GATAGTATATGCTGTAAACGAAACAACGGGCGAGAAAGTTCTCACATATA
CACTGTACGAGGGCATCCCAAGCATGTGGACAGACCCTGACACAGTCACC
GATCACCCAGCACTCACTGGCATCTACGGTCTCCTACCCCCCACGGCAGC
GGTGAACCAAACACTCGTATCGGCGACCGCGGCCCAAGTCGCCAGTGATT
GGAACTTTACAACCTGCTGGGGCTGGGACTTTCCCATGCTGGCGATGAAT
GCAGCAAGGCTGGGAGACGTAGACGCCGCAGTGCGGTATCTGGTGCACCC
GAATTTTGAATTTGACGACGTGGGTATGCCAGTGGGGACCAAGGCACCGA
CCCCTTATTTTCCTGGAAGTTCGGCCCTCTTGTTGGCTGTTGCGATGATG
GCTGGGGGTTGGGATGCTGCAACTAACAGCAGTCAGCAGGACTTTGCGCC
CGGGTTTCCGGCCAAATGGAATGTTCGTGCTGAGGGGTTTGGGCAGATGC
TGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008402ATCC10864_008402Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008402-T1.exon1ATCC10864_008402-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008402-T1.cdsATCC10864_008402-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008402-T1ATCC10864_008402-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012341
InterProIPR008928
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:573392..575596 +
Powered by Drupal