You are here

Home

ATCC10864_008403-T1, ATCC10864_008403-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008403-T1
Unique NameATCC10864_008403-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:575810..576917-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008403-T1 ID=ATCC10864_008403-T1|Name=ATCC10864_008403-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1108bp|location=Sequence derived from alignment at MCQH01000199:575810..576917- (Aspergillus niger ATCC 10864)
ATGTCCACCACTGCCCGTGCCGATTTCGAGGCCGTCTTCCCCTCTTTGCG
GGAAGACCTTCTGAACTATGCGAAGCAGTACAAGCTGCCCCAGAACGCTC
TCGAGTGGTTCGAGAAGGTATGTGCCGACCTCCCTAAGTTTTCGCCCCCA
AAGTCAATCTCTAATCCTTATTTCTCTTCAATAGGCCCTCAATGTCAACG
TCCCCGGTGGAAAGCTCAACCGTGGTCTCTCCGTCCCCGACACCGGTCTC
GCTCTCCTGAAGAAGCCCCTGACCGATGAGCAATTCAAGCACCTCAGTCT
GCTGGGCTGGCTCACCGAGCTGCTCCAGGCCTTCTTCCTGGTTAGCGACG
ACATCATGGACGGCTCCATCACCCGTCGCGGCCAGCCCTGCTGGTACAAG
CACGAAGGAGTCGGACTGATCGCTATCAACGACGCCTTCCTGCTCGAGTC
TGGCATCTACATTATCCTGAAGAAGTACTTCCGCTCTCACCCCGCCTACA
TCGACCTCGTCGAGCTCTTCCACGAGACCACCTACCAGACCGAGCTGGGC
CAGCTGTGTGACCTGATCACCGCCCCCGAGGACAACGTCAACCTCGACAA
CTTCTCCATGGAGAAGTACATGTTCATCGTCACCTACAAGACCGCCTACT
ACAGCTTCTACCTCCCCGTTGCTCTGGCCCTGCACTACCTCCAGCTCGCT
ACCCCCGAGAACCTGCGTCAGGCCCACGACATCCTCATCCCCCTGGGTCA
GTACTTCCAGGTCCAGGATGACTACCTTGATGCCTACGGTGACCCCGCCT
TCATTGGCAAGATTGGTACCGATATCCAGGATAACAAGTGCTCGTGGTTG
GTCAACCAGGCTCTGCAGCGTTGCAACGCTGAGCAGCGCAAGGTCCTTGA
CACTGCTTACGGTCGTAAGGACGCTGAGCTGGAGGCCAAGGTCAAGGCCC
TGTACAAGGAGCTCGACTTGGAGAAGATCTACAAGGAATACGAGGAGAGC
GTTGTTGGTGAAATCCGCACCAAGATCAACAGCATCAACGAGTCGGAGGG
TCTGAAGAAGGAGGTCTTCGAGGCCTTCCTCGCGAAGATCTACAAGCGCA
CTAAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:575810..576917-

>ATCC10864_008403-T1 ID=ATCC10864_008403-T1|Name=ATCC10864_008403-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2082bp|location=Sequence derived from alignment at MCQH01000199:575810..576917- (Aspergillus niger ATCC 10864)
GCCCTCAATGTCAACGTCCCCGGTGGAAAGCTCAACCGTGGTCTCTCCGT
CCCCGACACCGGTCTCGCTCTCCTGAAGAAGCCCCTGACCGATGAGCAAT
TCAAGCACCTCAGTCTGCTGGGCTGGCTCACCGAGCTGCTCCAGGCCTTC
TTCCTGGTTAGCGACGACATCATGGACGGCTCCATCACCCGTCGCGGCCA
GCCCTGCTGGTACAAGCACGAAGGAGTCGGACTGATCGCTATCAACGACG
CCTTCCTGCTCGAGTCTGGCATCTACATTATCCTGAAGAAGTACTTCCGC
TCTCACCCCGCCTACATCGACCTCGTCGAGCTCTTCCACGAGACCACCTA
CCAGACCGAGCTGGGCCAGCTGTGTGACCTGATCACCGCCCCCGAGGACA
ACGTCAACCTCGACAACTTCTCCATGGAGAAGTACATGTTCATCGTCACC
TACAAGACCGCCTACTACAGCTTCTACCTCCCCGTTGCTCTGGCCCTGCA
CTACCTCCAGCTCGCTACCCCCGAGAACCTGCGTCAGGCCCACGACATCC
TCATCCCCCTGGGTCAGTACTTCCAGGTCCAGGATGACTACCTTGATGCC
TACGGTGACCCCGCCTTCATTGGCAAGATTGGTACCGATATCCAGGATAA
CAAGTGCTCGTGGTTGGTCAACCAGGCTCTGCAGCGTTGCAACGCTGAGC
AGCGCAAGGTCCTTGACACTGCTTACGGTCGTAAGGACGCTGAGCTGGAG
GCCAAGGTCAAGGCCCTGTACAAGGAGCTCGACTTGGAGAAGATCTACAA
GGAATACGAGGAGAGCGTTGTTGGTGAAATCCGCACCAAGATCAACAGCA
TCAACGAGTCGGAGGGTCTGAAGAAGGAGGTCTTCGAGGCCTTCCTCGCG
AAGATCTACAAGCGCACTAAATAAATGTCCACCACTGCCCGTGCCGATTT
CGAGGCCGTCTTCCCCTCTTTGCGGGAAGACCTTCTGAACTATGCGAAGC
AGTACAAGCTGCCCCAGAACGCTCTCGAGTGGTTCGAGAAGGCCCTCAAT
GTCAACGTCCCCGGTGGAAAGCTCAACCGTGGTCTCTCCGTCCCCGACAC
CGGTCTCGCTCTCCTGAAGAAGCCCCTGACCGATGAGCAATTCAAGCACC
TCAGTCTGCTGGGCTGGCTCACCGAGCTGCTCCAGGCCTTCTTCCTGGTT
AGCGACGACATCATGGACGGCTCCATCACCCGTCGCGGCCAGCCCTGCTG
GTACAAGCACGAAGGAGTCGGACTGATCGCTATCAACGACGCCTTCCTGC
TCGAGTCTGGCATCTACATTATCCTGAAGAAGTACTTCCGCTCTCACCCC
GCCTACATCGACCTCGTCGAGCTCTTCCACGAGACCACCTACCAGACCGA
GCTGGGCCAGCTGTGTGACCTGATCACCGCCCCCGAGGACAACGTCAACC
TCGACAACTTCTCCATGGAGAAGTACATGTTCATCGTCACCTACAAGACC
GCCTACTACAGCTTCTACCTCCCCGTTGCTCTGGCCCTGCACTACCTCCA
GCTCGCTACCCCCGAGAACCTGCGTCAGGCCCACGACATCCTCATCCCCC
TGGGTCAGTACTTCCAGGTCCAGGATGACTACCTTGATGCCTACGGTGAC
CCCGCCTTCATTGGCAAGATTGGTACCGATATCCAGGATAACAAGTGCTC
GTGGTTGGTCAACCAGGCTCTGCAGCGTTGCAACGCTGAGCAGCGCAAGG
TCCTTGACACTGCTTACGGTCGTAAGGACGCTGAGCTGGAGGCCAAGGTC
AAGGCCCTGTACAAGGAGCTCGACTTGGAGAAGATCTACAAGGAATACGA
GGAGAGCGTTGTTGGTGAAATCCGCACCAAGATCAACAGCATCAACGAGT
CGGAGGGTCTGAAGAAGGAGGTCTTCGAGGCCTTCCTCGCGAAGATCTAC
AAGCGCACTAAATAAATGTCCACCACTGCCCGTGCCGATTTCGAGGCCGT
CTTCCCCTCTTTGCGGGAAGACCTTCTGAACTATGCGAAGCAGTACAAGC
TGCCCCAGAACGCTCTCGAGTGGTTCGAGAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008403ATCC10864_008403Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008403-T1ATCC10864_008403-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008403-T1.cdsATCC10864_008403-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008403-T1.exon2ATCC10864_008403-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008403-T1.exon1ATCC10864_008403-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00348
InterProIPR000092
InterProIPR039702
InterProIPR033749
InterProIPR008949
Properties
Property NameValue
NoteBUSCO:EOG092633US
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:575810..576917 -
Powered by Drupal