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ATCC10864_008406-T1, ATCC10864_008406-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008406-T1
Unique NameATCC10864_008406-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:585576..586946+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008406-T1 ID=ATCC10864_008406-T1|Name=ATCC10864_008406-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1371bp|location=Sequence derived from alignment at MCQH01000199:585576..586946+ (Aspergillus niger ATCC 10864)
ATGGCGGACGGAATTGACAGACGCGCTGATGGTAGGACCTCCAAAAGTCC
CCAACAGTTATTCAGGTCGGTATACTGACTGCGCAAAACTAGACCGCATG
GAGTTCAATACCTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACAT
GCACTTGAAGGAGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAAT
CTCCGTCTGCAGTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGC
GATACCATTGCTCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTC
GATTAGTATCCTCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGGTA
TGTAATATGCGCTCAATTGCATTTTGTTGGTGGTAATCTCACATCTGATA
GCCCTCGTCCTTTCCCCCACTCGTGAACTTGCCACCCAGATTCAGTCCGT
TATTATGGCCCTCGGTGATTACATGAACGTTCAGTGCCATGCTTGTATTG
GAGGCACAAATATTGGAGAGGATATCAGGAAGCTTGACTACGGCCAGCAT
GTCGTTTCGGGCACACCGGGCAGAGTCGCCGATATGATTCGCAGACGTCA
TCTGCGCACCCGTCACATCAAGATGCTGGTTCTTGATGAAGCCGATGAAC
TACTCAACCGTGGATTCCGTGAACAGATTTACGATGTCTACCGCTACCTT
CCTCCTGCCACGCAAGTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGT
GCTTGACATGACCACCAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCA
AGCGTGACGAGTTGACCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTG
GAGAAGGAAGAGTGGAAGTTCGATACCCTTTGCGACCTTTACGATACCTT
GACTATCACCCAGGCGGTCATCTTCTGCAACACCCGTCGCAAGGTCGACT
GGCTTACCGACAAGATGCGCGAAGCCAACTTTACTGTGTCCAGTATGCAC
GGTGAAATGCCCCAGAAGGAGCGTGACAGCATTATGCAGGATTTCCGCCA
GGGTAATTCCCGTGTGCTTATCTCCACTGATGTCTGGGCTCGTGGTATCG
ATGTGCAGCAGGTGTCCCTCGTCATCAACTACGATCTGCCCACTAACCGT
GAAAACTACATCCACCGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGG
TGTTGCCATCAACTTCGTCACCAGCGATGACGTGCGCATCCTCCGCGACA
TTGAACTCTACTACTCCACTCAGATTGATGAGATGCCCATGAATGGTATG
TTGACACCATCTATATCACCAAGACCGGATATAACTAACCCATTTTTCCA
GTTGCCGATCTTCTGTCATAA
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Coding sequence (CDS) from alignment at MCQH01000199:585576..586946+

>ATCC10864_008406-T1 ID=ATCC10864_008406-T1|Name=ATCC10864_008406-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4800bp|location=Sequence derived from alignment at MCQH01000199:585576..586946+ (Aspergillus niger ATCC 10864)
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0003724RNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FAL1ATCC10864_008406Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008406-T1.exon1ATCC10864_008406-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008406-T1.exon2ATCC10864_008406-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008406-T1.exon3ATCC10864_008406-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008406-T1.exon4ATCC10864_008406-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008406-T1.cdsATCC10864_008406-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008406-T1ATCC10864_008406-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00270
InterProIPR027417
InterProIPR000629
PFAMPF00271
InterProIPR014014
InterProIPR001650
InterProIPR011545
InterProIPR014001
Properties
Property NameValue
ProductRNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:585576..586946 +
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