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ATCC10864_008414-T1, ATCC10864_008414-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008414-T1
Unique NameATCC10864_008414-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:609665..610962+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008414-T1 ID=ATCC10864_008414-T1|Name=ATCC10864_008414-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1298bp|location=Sequence derived from alignment at MCQH01000199:609665..610962+ (Aspergillus niger ATCC 10864)
ATGGCCGATAAGCAGTACTATACACCCGGCACTGAATACAGCAGGTATGG
GGGCGCCACCAGTCAGCTTCCCAAATTAGACGATGATCTCGGTCATGCAG
GGCCTCCCCCTCCGCCAGGATCCGGGCAATTTATACCTCCGCAGCAGACG
GTCGCTCAGTATTCCTGGTACGACCTTCGCGGCTGGTCGCTACGGAAAAA
GTTGATTGTAGCAGCCGTCATCATTGTCATCATCATTGCAGTCGTTGTTG
GTGCAGTCGAAGGGACGAAGAAGAAAGGGTATCCCGACTATTCCAAGCTT
GATTACAAGCTGGTGGACACGTATTCGGGCAACTCGTTCTTTGACCGGTT
CAACTACTATTCTGGCGAGGATCCCACTGATGGATTTGTCCAGTATGGCT
ATCCCAATCCTCAATGTATTAGACTTAACTGACGATACACAGATATGTAA
ATCAGTCAACATCAAATTCCTTGAATCTGACCTATGCTGGCGAAGACTCC
GTTGTGCTCAAGGTGGACACATCCAACAAGAATGCAACAAAAGGAAGACA
GTCTGTGCGTCTGGAGTCAAAAACAAGTTACGATAGCGGCCTCTTCATCT
TCGACATTCTCCACACGCCATATGGCTGTGGCCTATGGCCAGCATTGTGG
TTAACCGATACCTACAACTGGCCTGAAAACGGAGAAATCGACGTGGTTGA
GACGAACAACCTGGCCACCGAGGGAAATGCCGTTACATTGCATACAACCA
GCGGTTGTAAAATGAATGTCAAGCGAAAGGAAACCGGTACCCCAAATTAC
GTGACCTGCGACAACAGCACGCATAGCAACGCCGGATGTGGTGTACAGGG
CTCGCCAAGCACGTACGGTCAAGAAATGAACGAGAACGGCGGCGGGGTAA
GTCATCCTTTATTACAGATATGAGTCATGCAGTGCATATATTGACGACAA
TAGGTTTACGCTCTGGAGCTACGGGATGCCGGAATCCGAGCTTGGTTCTT
CTCACGCGATTCTATTCCCGACGACATTTCGAACTCGAGCAGCACTCCAG
ACCCATCAACATGGGGGACTGCATTGGCTGACTTTCCCAATACTCACTGC
GATATACCCTCTCACTTCAAAAATCAAAGTATAATTGCCAACATCGATCT
CTGCGGACAGCTCGGTGGTAACAAGGCATTCTATACTGAACAGTATCACT
GTCCGGGTACATGCGAAAGTTTTGTCCGCAGCAACCCTGGCAACTTCACT
CAGGCGTACTGGGAGTTCAAAAGCTTCAAAGTATATCAGGCTAGTTAG
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Coding sequence (CDS) from alignment at MCQH01000199:609665..610962+

>ATCC10864_008414-T1 ID=ATCC10864_008414-T1|Name=ATCC10864_008414-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3573bp|location=Sequence derived from alignment at MCQH01000199:609665..610962+ (Aspergillus niger ATCC 10864)
ATGGCCGATAAGCAGTACTATACACCCGGCACTGAATACAGCAGGTATGG
GGGCGCCACCAGTCAGCTTCCCAAATTAGACGATGATCTCGGTCATGCAG
GGCCTCCCCCTCCGCCAGGATCCGGGCAATTTATACCTCCGCAGCAGACG
GTCGCTCAGTATTCCTGGTACGACCTTCGCGGCTGGTCGCTACGGAAAAA
GTTGATTGTAGCAGCCGTCATCATTGTCATCATCATTGCAGTCGTTGTTG
GTGCAGTCGAAGGGACGAAGAAGAAAGGGTATCCCGACTATTCCAAGCTT
GATTACAAGCTGGTGGACACGTATTCGGGCAACTCGTTCTTTGACCGGTT
CAACTACTATTCTGGCGAGGATCCCACTGATGGATTTGTCCAATATGTAA
ATCAGTCAACATCAAATTCCTTGAATCTGACCTATGCTGGCGAAGACTCC
GTTGTGCTCAAGGTGGACACATCCAACAAGAATGCAACAAAAGGAAGACA
GTCTGTGCGTCTGGAGTCAAAAACAAGTTACGATAGCGGCCTCTTCATCT
TCGACATTCTCCACACGCCATATGGCTGTGGCCTATGGCCAGCATTGTGG
TTAACCGATACCTACAACTGGCCTGAAAACGGAGAAATCGACGTGGTTGA
GACGAACAACCTGGCCACCGAGGGAAATGCCGTTACATTGCATACAACCA
GCGGTTGTAAAATGAATGTCAAGCGAAAGGAAACCGGTACCCCAAATTAC
GTGACCTGCGACAACAGCACGCATAGCAACGCCGGATGTGGTGTACAGGG
CTCGCCAAGCACGTACGGTCAAGAAATGAACGAGAACGGCGGCGGGGTTT
ACGCTCTGGAGCTACGGGATGCCGGAATCCGAGCTTGGTTCTTCTCACGC
GATTCTATTCCCGACGACATTTCGAACTCGAGCAGCACTCCAGACCCATC
AACATGGGGGACTGCATTGGCTGACTTTCCCAATACTCACTGCGATATAC
CCTCTCACTTCAAAAATCAAAGTATAATTGCCAACATCGATCTCTGCGGA
CAGCTCGGTGGTAACAAGGCATTCTATACTGAACAGTATCACTGTCCGGG
TACATGCGAAAGTTTTGTCCGCAGCAACCCTGGCAACTTCACTCAGGCGT
ACTGGGAGTTCAAAAGCTTCAAAGTATATCAGGCTAGTTAGATGGCCGAT
AAGCAGTACTATACACCCGGCACTGAATACAGCAGGTATGGGGGCGCCAC
CAGTCAGCTTCCCAAATTAGACGATGATCTCGGTCATGCAGGGCCTCCCC
CTCCGCCAGGATCCGGGCAATTTATACCTCCGCAGCAGACGGTCGCTCAG
TATTCCTGGTACGACCTTCGCGGCTGGTCGCTACGGAAAAAGTTGATTGT
AGCAGCCGTCATCATTGTCATCATCATTGCAGTCGTTGTTGGTGCAGTCG
AAGGGACGAAGAAGAAAGGGTATCCCGACTATTCCAAGCTTGATTACAAG
CTGGTGGACACGTATTCGGGCAACTCGTTCTTTGACCGGTTCAACTACTA
TTCTGGCGAGGATCCCACTGATGGATTTGTCCAATATGTAAATCAGTCAA
CATCAAATTCCTTGAATCTGACCTATGCTGGCGAAGACTCCGTTGTGCTC
AAGGTGGACACATCCAACAAGAATGCAACAAAAGGAAGACAGTCTGTGCG
TCTGGAGTCAAAAACAAGTTACGATAGCGGCCTCTTCATCTTCGACATTC
TCCACACGCCATATGGCTGTGGCCTATGGCCAGCATTGTGGTTAACCGAT
ACCTACAACTGGCCTGAAAACGGAGAAATCGACGTGGTTGAGACGAACAA
CCTGGCCACCGAGGGAAATGCCGTTACATTGCATACAACCAGCGGTTGTA
AAATGAATGTCAAGCGAAAGGAAACCGGTACCCCAAATTACGTGACCTGC
GACAACAGCACGCATAGCAACGCCGGATGTGGTGTACAGGGCTCGCCAAG
CACGTACGGTCAAGAAATGAACGAGAACGGCGGCGGGGTTTACGCTCTGG
AGCTACGGGATGCCGGAATCCGAGCTTGGTTCTTCTCACGCGATTCTATT
CCCGACGACATTTCGAACTCGAGCAGCACTCCAGACCCATCAACATGGGG
GACTGCATTGGCTGACTTTCCCAATACTCACTGCGATATACCCTCTCACT
TCAAAAATCAAAGTATAATTGCCAACATCGATCTCTGCGGACAGCTCGGT
GGTAACAAGGCATTCTATACTGAACAGTATCACTGTCCGGGTACATGCGA
AAGTTTTGTCCGCAGCAACCCTGGCAACTTCACTCAGGCGTACTGGGAGT
TCAAAAGCTTCAAAGTATATCAGGCTAGTTAGATGGCCGATAAGCAGTAC
TATACACCCGGCACTGAATACAGCAGGTATGGGGGCGCCACCAGTCAGCT
TCCCAAATTAGACGATGATCTCGGTCATGCAGGGCCTCCCCCTCCGCCAG
GATCCGGGCAATTTATACCTCCGCAGCAGACGGTCGCTCAGTATTCCTGG
TACGACCTTCGCGGCTGGTCGCTACGGAAAAAGTTGATTGTAGCAGCCGT
CATCATTGTCATCATCATTGCAGTCGTTGTTGGTGCAGTCGAAGGGACGA
AGAAGAAAGGGTATCCCGACTATTCCAAGCTTGATTACAAGCTGGTGGAC
ACGTATTCGGGCAACTCGTTCTTTGACCGGTTCAACTACTATTCTGGCGA
GGATCCCACTGATGGATTTGTCCAATATGTAAATCAGTCAACATCAAATT
CCTTGAATCTGACCTATGCTGGCGAAGACTCCGTTGTGCTCAAGGTGGAC
ACATCCAACAAGAATGCAACAAAAGGAAGACAGTCTGTGCGTCTGGAGTC
AAAAACAAGTTACGATAGCGGCCTCTTCATCTTCGACATTCTCCACACGC
CATATGGCTGTGGCCTATGGCCAGCATTGTGGTTAACCGATACCTACAAC
TGGCCTGAAAACGGAGAAATCGACGTGGTTGAGACGAACAACCTGGCCAC
CGAGGGAAATGCCGTTACATTGCATACAACCAGCGGTTGTAAAATGAATG
TCAAGCGAAAGGAAACCGGTACCCCAAATTACGTGACCTGCGACAACAGC
ACGCATAGCAACGCCGGATGTGGTGTACAGGGCTCGCCAAGCACGTACGG
TCAAGAAATGAACGAGAACGGCGGCGGGGTTTACGCTCTGGAGCTACGGG
ATGCCGGAATCCGAGCTTGGTTCTTCTCACGCGATTCTATTCCCGACGAC
ATTTCGAACTCGAGCAGCACTCCAGACCCATCAACATGGGGGACTGCATT
GGCTGACTTTCCCAATACTCACTGCGATATACCCTCTCACTTCAAAAATC
AAAGTATAATTGCCAACATCGATCTCTGCGGACAGCTCGGTGGTAACAAG
GCATTCTATACTGAACAGTATCACTGTCCGGGTACATGCGAAAGTTTTGT
CCGCAGCAACCCTGGCAACTTCACTCAGGCGTACTGGGAGTTCAAAAGCT
TCAAAGTATATCAGGCTAGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008414ATCC10864_008414Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008414-T1.exon1ATCC10864_008414-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008414-T1.exon2ATCC10864_008414-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008414-T1.exon3ATCC10864_008414-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008414-T1.cdsATCC10864_008414-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008414-T1ATCC10864_008414-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00722
InterProIPR000757
InterProIPR013320
Properties
Property NameValue
NoteCAZy:GH16
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:609665..610962 +
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