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ATCC10864_008499-T1, ATCC10864_008499-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008499-T1
Unique NameATCC10864_008499-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:855922..857564-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008499-T1 ID=ATCC10864_008499-T1|Name=ATCC10864_008499-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1643bp|location=Sequence derived from alignment at MCQH01000199:855922..857564- (Aspergillus niger ATCC 10864)
ATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGTATGTGCTA
CTAAAACATCTTTTGCTTTATGCTTTTTTTTTTCTTTTCCTACAAAAGCG
AGTTTGTGGTTTTTATCGATCACTTTGCTGGAGATTGGGGCTCGCTCCCA
AGTCAGCAGAGGAAAGAGAGATAACCGCCACATTCCATCATCGGAACATC
TTTCAAAAGAAACAAGCTGACCAGAAACTTCACCTCAATAGGACAGATCG
AGACTAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAG
CCCGAGCTGCTTCGCGGTATGTGATACAAATTTTATCATCGCCCTGGTGG
GGTCTGTGCCAACATGTTCTGACGACGTCCAGGTGTCTACGCCTACGGTT
TTGAGCGTCCCTCCGCTATCCAGCAGCGTGCCATCAAGCCCATCATTGCC
GGTACGTCTCCCCCCCGCGCGATCGCCTATAATCTATGATGCTAACTAGA
GCATCCCAGGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAG
ACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAA
GGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGA
TCCAGAAGGTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCAC
GCCTGCATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGC
CGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTG
AGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAG
GCTGATGAGATGCTTTCTGTAAGTCCATACCAGATCTGGGCCCAGGGAAG
ACGTGCCTTTGCTAATAAATGTGATTAGCGTGGTTTCACCGAGCAAATCT
ACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTGTCC
GCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCGTGA
CCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTATCA
AGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACCCTC
TCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTTCTGTAA
CACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTGACT
TCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGATGTT
ATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCACTGA
CCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCAACT
ACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGTGGT
GGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGACGA
TGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCGAGG
AGATGCCCATGAACGTTGCTGGTAAGCTAGCCTTCACCCACACTCTGATT
ATCGTATCTTCCATACTGATTTTTGGTTCCAGACCTCATCTAA
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Coding sequence (CDS) from alignment at MCQH01000199:855922..857564-

>ATCC10864_008499-T1 ID=ATCC10864_008499-T1|Name=ATCC10864_008499-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7182bp|location=Sequence derived from alignment at MCQH01000199:855922..857564- (Aspergillus niger ATCC 10864)
ACCTCATCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTC
CTCCCCCAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGA
TGTCCTTGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGG
TCAAGAAGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCT
GTTGAGAAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGAC
CGTCACCATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCG
ACTGGCTCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATG
CACGGTGACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCG
TTCCGGATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTA
TCGATGTCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAAC
CGTGAGAACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAA
GGGTGTTGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTG
AGATTGAGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTT
GCTGGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGC
CACTTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTT
GCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAG
AAGGTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTG
CATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCC
CCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGC
CGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGA
TGAGATGCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTAT
CCAGCAGCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACT
ACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTG
CTTCGCGATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACC
TCATCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTC
CCCCAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGT
CCTTGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCA
AGAAGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTT
GAGAAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGT
CACCATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACT
GGCTCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCAC
GGTGACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTC
CGGATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCG
ATGTCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGT
GAGAACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGG
TGTTGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGA
TTGAGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCT
GGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCAC
TTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCC
AGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAG
GTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCAT
TGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCC
AGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGT
GTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGA
GATGCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCA
GCAGCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACG
ATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTT
CGCGATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCA
TCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCC
CAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCT
TGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGA
AGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAG
AAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCAC
CATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGC
TCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGT
GACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGG
ATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATG
TCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAG
AACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGT
TGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTG
AGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGC
CACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTT
CTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGG
CTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTC
GTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGG
TGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGG
TCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTC
CTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGAT
GCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCA
GCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATG
AGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGC
GATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCT
AACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAG
TCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGA
GGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGC
AGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAG
GAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCAT
TACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCA
CTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGAC
ATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATC
TTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCC
AGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAAC
TACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGC
CATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGC
AGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCAC
GATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTC
CATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTC
TGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTT
GTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGG
TACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCG
TTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTC
AAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCT
TTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCG
TGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGG
TTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGAT
GGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCTAAC
GTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCT
ACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGT
CACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGG
AGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAG
GAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTAC
CCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTG
ACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATG
GAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTC
CCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGC
AGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTAC
ATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCAT
CAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGT
TCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCACGAT
GTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCAT
CTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGA
TTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTT
GCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTAC
CAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTG
TCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAG
ACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTC
TGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGC
CATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGGTTA
CCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGATGGC
TTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCTAACGTG
GTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACC
CAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCAC
CACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGC
TTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAG
TGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCA
GGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACA
AGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAG
CAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCG
TGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGG
TCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATC
CACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAA
CTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCT
ACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCACGATGTC
ATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTC
CGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTG
TCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCC
ATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAA
CGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCG
GTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACC
GACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTGT
GTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGCCAT
CAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGGTTACCG
ACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGATGGCTTC
TAACGACAAGGGCTTGGAGGAGATCCCCGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0003724RNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF1ATCC10864_008499Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008499-T1ATCC10864_008499-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008499-T1.cdsATCC10864_008499-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008499-T1.exon6ATCC10864_008499-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_008499-T1.exon5ATCC10864_008499-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_008499-T1.exon4ATCC10864_008499-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008499-T1.exon3ATCC10864_008499-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008499-T1.exon2ATCC10864_008499-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008499-T1.exon1ATCC10864_008499-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00270
InterProIPR027417
InterProIPR000629
PFAMPF00271
InterProIPR044728
PFAMPF04851
InterProIPR014014
InterProIPR001650
InterProIPR011545
InterProIPR014001
Properties
Property NameValue
Producttranslation initiation factor eIF4A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:855922..857564 -
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