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ATCC10864_008517-T1, ATCC10864_008517-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008517-T1
Unique NameATCC10864_008517-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:915106..916186+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008517-T1 ID=ATCC10864_008517-T1|Name=ATCC10864_008517-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1081bp|location=Sequence derived from alignment at MCQH01000199:915106..916186+ (Aspergillus niger ATCC 10864)
ATGACCACTCCGGACGTCTATCGAGATGCGGAATACATCGCTGACGTGTC
CGGCATCATCGACCCTTATGGCGGCGCCAGCGCCAACTCCACCAGCCGCA
CCGAGCGCCTGAGAAAGGTGCAGACGGCCGCGAAAGTCGCGTTCATTGAC
CGACTTCTCCGCGACCTAGATATCCTTATTTACTGTGAGCTTTCAGCGTT
GTATTATATGGAGTGAGCAGAAATCCACCCCCCGCCCCCGCAACTCCGCA
CGAGCGCGGACCCCATAAAGTATAATCTATCAAGCGATAAGTCACAACTA
ACAATACATGTTCTTCAGCTGCTCGATAATTCTCTTCGCCCTCCGCGCCA
TAATCCAACTCATCTTCTTCACACCCAAAGCACCCCCCTTCGACCCTACG
AGAAACCAACCCTTCGTCGGCGCTATCCTGGGTAGTAACCTCTTCTGCAT
GATCTTTCATAGATTCTTCACTAGACCCGAAGCCAGCGAATCGACGCGCG
GATACCTGCATGGTGGGATCTTGATTGATTTTATTGGACAGAAAACGCCT
ATCCCGTTCGCTAGACTTCTTTTCCTGGATTGCCTCATTTTGTTTCTGGA
TCTGGTCATGTTGGGGTTGATCGTTGAGCGGGTAAAGACAGTAGAGGTTA
CTGCAAGTACGCCGGTTGAGACCACGCCCGAGGGGGAGGAAGAGCGACAG
GATCACGATCTGGAGGAGAGGGGGTTGCGAGGGAGTGGGCCTTCTACGAG
ATCGTCGACGCGGACATTGGAGGATGATGAAGATGGGGAGACGATTGAGT
TGGGTGAGATGGAGAGGACGCAGTTGTTGGCTGATCCGGAGGAGGGAGGG
AGGAATGCACAGCACGCCCATCCTATGGATACGTTTGTGTCAGGTCAGGC
AGTGATCATGGATATGGGATTGGTTGACCTTGTTCGTGATCAGTGGCGGC
ACAGCCCTGCGACAGCGCGGCGGACGACACCGTACGTGCCCTCTGATCAG
ACCGCGGCGTTCTTGAGAGAGCGGTTTGGCATTCGAGTTGGCGCAGATGG
GCGCATGGAGCGGATCGGAACGGAGGCGTGA
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Coding sequence (CDS) from alignment at MCQH01000199:915106..916186+

>ATCC10864_008517-T1 ID=ATCC10864_008517-T1|Name=ATCC10864_008517-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1950bp|location=Sequence derived from alignment at MCQH01000199:915106..916186+ (Aspergillus niger ATCC 10864)
ATGACCACTCCGGACGTCTATCGAGATGCGGAATACATCGCTGACGTGTC
CGGCATCATCGACCCTTATGGCGGCGCCAGCGCCAACTCCACCAGCCGCA
CCGAGCGCCTGAGAAAGGTGCAGACGGCCGCGAAAGTCGCGTTCATTGAC
CGACTTCTCCGCGACCTAGATATCCTTATTTACTGTGAGCTTTCAGCGTT
GTATTATATGGACTGCTCGATAATTCTCTTCGCCCTCCGCGCCATAATCC
AACTCATCTTCTTCACACCCAAAGCACCCCCCTTCGACCCTACGAGAAAC
CAACCCTTCGTCGGCGCTATCCTGGGTAGTAACCTCTTCTGCATGATCTT
TCATAGATTCTTCACTAGACCCGAAGCCAGCGAATCGACGCGCGGATACC
TGCATGGTGGGATCTTGATTGATTTTATTGGACAGAAAACGCCTATCCCG
TTCGCTAGACTTCTTTTCCTGGATTGCCTCATTTTGTTTCTGGATCTGGT
CATGTTGGGGTTGATCGTTGAGCGGGTAAAGACAGTAGAGGTTACTGCAA
GTACGCCGGTTGAGACCACGCCCGAGGGGGAGGAAGAGCGACAGGATCAC
GATCTGGAGGAGAGGGGGTTGCGAGGGAGTGGGCCTTCTACGAGATCGTC
GACGCGGACATTGGAGGATGATGAAGATGGGGAGACGATTGAGTTGGGTG
AGATGGAGAGGACGCAGTTGTTGGCTGATCCGGAGGAGGGAGGGAGGAAT
GCACAGCACGCCCATCCTATGGATACGTTTGTGTCAGGTCAGGCAGTGAT
CATGGATATGGGATTGGTTGACCTTGTTCGTGATCAGTGGCGGCACAGCC
CTGCGACAGCGCGGCGGACGACACCGTACGTGCCCTCTGATCAGACCGCG
GCGTTCTTGAGAGAGCGGTTTGGCATTCGAGTTGGCGCAGATGGGCGCAT
GGAGCGGATCGGAACGGAGGCGTGAATGACCACTCCGGACGTCTATCGAG
ATGCGGAATACATCGCTGACGTGTCCGGCATCATCGACCCTTATGGCGGC
GCCAGCGCCAACTCCACCAGCCGCACCGAGCGCCTGAGAAAGGTGCAGAC
GGCCGCGAAAGTCGCGTTCATTGACCGACTTCTCCGCGACCTAGATATCC
TTATTTACTGTGAGCTTTCAGCGTTGTATTATATGGACTGCTCGATAATT
CTCTTCGCCCTCCGCGCCATAATCCAACTCATCTTCTTCACACCCAAAGC
ACCCCCCTTCGACCCTACGAGAAACCAACCCTTCGTCGGCGCTATCCTGG
GTAGTAACCTCTTCTGCATGATCTTTCATAGATTCTTCACTAGACCCGAA
GCCAGCGAATCGACGCGCGGATACCTGCATGGTGGGATCTTGATTGATTT
TATTGGACAGAAAACGCCTATCCCGTTCGCTAGACTTCTTTTCCTGGATT
GCCTCATTTTGTTTCTGGATCTGGTCATGTTGGGGTTGATCGTTGAGCGG
GTAAAGACAGTAGAGGTTACTGCAAGTACGCCGGTTGAGACCACGCCCGA
GGGGGAGGAAGAGCGACAGGATCACGATCTGGAGGAGAGGGGGTTGCGAG
GGAGTGGGCCTTCTACGAGATCGTCGACGCGGACATTGGAGGATGATGAA
GATGGGGAGACGATTGAGTTGGGTGAGATGGAGAGGACGCAGTTGTTGGC
TGATCCGGAGGAGGGAGGGAGGAATGCACAGCACGCCCATCCTATGGATA
CGTTTGTGTCAGGTCAGGCAGTGATCATGGATATGGGATTGGTTGACCTT
GTTCGTGATCAGTGGCGGCACAGCCCTGCGACAGCGCGGCGGACGACACC
GTACGTGCCCTCTGATCAGACCGCGGCGTTCTTGAGAGAGCGGTTTGGCA
TTCGAGTTGGCGCAGATGGGCGCATGGAGCGGATCGGAACGGAGGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0044695Dsc E3 ubiquitin ligase complex
Vocabulary: Biological Process
TermDefinition
GO:0035103sterol regulatory element binding protein cleavage
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008517ATCC10864_008517Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008517-T1.exon1ATCC10864_008517-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008517-T1.exon2ATCC10864_008517-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008517-T1.cdsATCC10864_008517-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008517-T1ATCC10864_008517-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08508
InterProIPR013715
InterProIPR038967
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:915106..916186 +
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