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ATCC10864_008548-T1, ATCC10864_008548-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008548-T1
Unique NameATCC10864_008548-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:994182..995169-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008548-T1 ID=ATCC10864_008548-T1|Name=ATCC10864_008548-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=988bp|location=Sequence derived from alignment at MCQH01000199:994182..995169- (Aspergillus niger ATCC 10864)
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTC GCTCCGCAACGTCCGATCGGTAGGATGCCCTCCCCTGTCAGCATCGCTCA GTAAACGGAGTTGCTCGAGCTGATCTTCAATTATGCACCTTGCTGACATC CTTCGGTCCACTAGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACT CCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACG CAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTG TCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTT GCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCA GCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCAC CGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCC GGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACAT GAATGCCGACTGTAAGGCTGTCAATACCCCTTGTGTGCAGCCTCCCTTGC TAACCGCTGTTTATAGGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGA GGGTATCTTCCCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTT CGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGA GCAGGGCAAGAAGTTTGGCAAGAAGATGGGCAATGCCGGTACGTTTAAAG CGATGCGCATTCGATCGCCATATAGATTGATGCGCCGAACGTCATTAAAT ATACGGTCAATTTTACTGATAATCACGTCTAGCTATCTTCGGTGCCGGTG CTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAG
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Coding sequence (CDS) from alignment at MCQH01000199:994182..995169-

>ATCC10864_008548-T1 ID=ATCC10864_008548-T1|Name=ATCC10864_008548-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2976bp|location=Sequence derived from alignment at MCQH01000199:994182..995169- (Aspergillus niger ATCC 10864)
CTATCTTCGGTGCCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATC
TTCTAGGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTC
CCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCC
CCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGA
CGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAG
AAGTTTGGCAAGAAGATGGGCAATGCCGGAACTTGAGTTTCTCGCAGACG
CATCAGTCATTACTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCA
AGGGACGATGAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGT
GCAACAACCACCTGTCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTC
CTACGAACCAGTTTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAG
CAGCCTCCTCCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTA
TCCCCAAGCTCCACCGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACA
CTCCGACGGACCCCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAA
GTCTTGGAACACATGAATGCCGACTATGAGCATGGCGTCCCAGTCCGACT
TCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATCGCTATCT
TCGGTGCCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAG
GGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGG
AGCTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGAC
CAACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACGCCCC
CTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTT
GGCAAGAAGATGGGCAATGCCGGAACTTGAGTTTCTCGCAGACGCATCAG
TCATTACTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGAC
GATGAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACA
ACCACCTGTCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGA
ACCAGTTTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCT
CCTCCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCA
AGCTCCACCGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGA
CGGACCCCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTG
GAACACATGAATGCCGACTATGAGCATGGCGTCCCAGTCCGACTTCTTCT
CGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATCGCTATCTTCGGTG
CCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAGGGTGGC
GTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAGCTAT
GTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCAACTA
TGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACGCCCCCTGGTG
AAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGGCAAG
AAGATGGGCAATGCCGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTA
CTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAA
CGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACC
TGTCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGT
TTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCG
CAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCC
ACCGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACC
CCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACAC
ATGAATGCCGACTATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTA
TGACCAACCGGTCGCTCCGCAACGTCCGATCGCTATCTTCGGTGCCGGTG
CTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAGGGTGGCGTGGTC
GTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAGCTATGTGAAC
GTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCAACTATGGAAA
CATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACGCCCCCTGGTGAAGAGG
GCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGGCAAGAAGATG
GGCAATGCCGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTCCGC
AACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACGCAGC
AGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGTCGT
CGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTGCAA
ACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCAGCAG
TACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACCGGT
ACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCGGAG
ACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACATGAAT
GCCGACTATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCA
ACCGGTCGCTCCGCAACGTCCGATCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008548ATCC10864_008548Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008548-T1ATCC10864_008548-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008548-T1.cdsATCC10864_008548-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008548-T1.exon4ATCC10864_008548-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008548-T1.exon3ATCC10864_008548-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008548-T1.exon2ATCC10864_008548-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008548-T1.exon1ATCC10864_008548-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07653
InterProIPR036028
PFAMPF00018
PFAMPF14604
InterProIPR001452
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:994182..995169 -