You are here

Home

ATCC10864_008550-T1, ATCC10864_008550-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008550-T1
Unique NameATCC10864_008550-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:997764..998310+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008550-T1 ID=ATCC10864_008550-T1|Name=ATCC10864_008550-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=547bp|location=Sequence derived from alignment at MCQH01000199:997764..998310+ (Aspergillus niger ATCC 10864)
ATGAGCGACTGGGACTCTGTTACGCGCATTGGAGCCAGGCACACTGGTGG
CCCTGCCACCCGCGAGACCGTCGTCAAGGGTAAGAGCGCCTTGAACGCCG
CCCAGCGTAACGGTCTCGTTATCGGTACTGAGAAGAAGTATGCTACTGGT
AACGCTGTAAGTTTAACCATATAATTCGCCCCTGGGGTTGGTTTCGAGAA
GCAGTGAGAGCGGGGTATGCTAACACACCATATAACAGGCCGGACGCTCC
GGTGCCCCCGAAGGCCAGCACCTGACCAAGGTCGACCGCAGCGACGACAT
CGTCAAGCCCAAGACCGTTGGCTACCAGGTGGCCGATGCGATCAAGAAGC
GCCGAAACGAGGACGGCTACAAGATGACTCAGAAGGAACTCGCCACCAAG
TGCAACACCACCATCACTGTTGTTCAGGACTTCGAGCGCGGTACTGCTGC
TCCGGACCAGAAGGTCCTCAGTGCCATGGAGCGCGTGCTGAACGTTAAGC
TGAGGGGTACGGGCATCGGGCAGGAGAAGTTCCCTAAGAAGAAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:997764..998310+

>ATCC10864_008550-T1 ID=ATCC10864_008550-T1|Name=ATCC10864_008550-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=930bp|location=Sequence derived from alignment at MCQH01000199:997764..998310+ (Aspergillus niger ATCC 10864)
ATGAGCGACTGGGACTCTGTTACGCGCATTGGAGCCAGGCACACTGGTGG
CCCTGCCACCCGCGAGACCGTCGTCAAGGGTAAGAGCGCCTTGAACGCCG
CCCAGCGTAACGGTCTCGTTATCGGTACTGAGAAGAAGTATGCTACTGGT
AACGCTGCCGGACGCTCCGGTGCCCCCGAAGGCCAGCACCTGACCAAGGT
CGACCGCAGCGACGACATCGTCAAGCCCAAGACCGTTGGCTACCAGGTGG
CCGATGCGATCAAGAAGCGCCGAAACGAGGACGGCTACAAGATGACTCAG
AAGGAACTCGCCACCAAGTGCAACACCACCATCACTGTTGTTCAGGACTT
CGAGCGCGGTACTGCTGCTCCGGACCAGAAGGTCCTCAGTGCCATGGAGC
GCGTGCTGAACGTTAAGCTGAGGGGTACGGGCATCGGGCAGGAGAAGTTC
CCTAAGAAGAAGTAAATGAGCGACTGGGACTCTGTTACGCGCATTGGAGC
CAGGCACACTGGTGGCCCTGCCACCCGCGAGACCGTCGTCAAGGGTAAGA
GCGCCTTGAACGCCGCCCAGCGTAACGGTCTCGTTATCGGTACTGAGAAG
AAGTATGCTACTGGTAACGCTGCCGGACGCTCCGGTGCCCCCGAAGGCCA
GCACCTGACCAAGGTCGACCGCAGCGACGACATCGTCAAGCCCAAGACCG
TTGGCTACCAGGTGGCCGATGCGATCAAGAAGCGCCGAAACGAGGACGGC
TACAAGATGACTCAGAAGGAACTCGCCACCAAGTGCAACACCACCATCAC
TGTTGTTCAGGACTTCGAGCGCGGTACTGCTGCTCCGGACCAGAAGGTCC
TCAGTGCCATGGAGCGCGTGCTGAACGTTAAGCTGAGGGGTACGGGCATC
GGGCAGGAGAAGTTCCCTAAGAAGAAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MBF1ATCC10864_008550Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008550-T1.exon1ATCC10864_008550-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008550-T1.exon2ATCC10864_008550-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008550-T1.cdsATCC10864_008550-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008550-T1ATCC10864_008550-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013729
PFAMPF08523
InterProIPR010982
InterProIPR001387
PFAMPF01381
Properties
Property NameValue
NoteBUSCO:EOG09264MN3
Productmultiprotein-bridging factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:997764..998310 +
Powered by Drupal