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ATCC10864_008565-T1, ATCC10864_008565-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008565-T1
Unique NameATCC10864_008565-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1028318..1029576-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008565-T1 ID=ATCC10864_008565-T1|Name=ATCC10864_008565-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1259bp|location=Sequence derived from alignment at MCQH01000199:1028318..1029576- (Aspergillus niger ATCC 10864)
ATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTC
AGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCG
AGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCC
AACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAA
TGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCT
CCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTG
GGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGT
CAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACA
ACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTC
ACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGG
GAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGC
CGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGA
GGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTGTACTTCCCCC
TCCCTCCCCCTCAACCCTATCCCCCCCAACCACAATACTAACAAGTAAAC
CCAGATCTACATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTC
TCGCGGGCCAAACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAA
TCATCCCAGATCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAA
GGGCACCAACACAACAGTCCGGAACAACTACGGCGTATACATCCACGACT
CGACCGTAAACGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCC
TGCGCCCTAGGCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAA
CACATACGAAGACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGG
ATCGGTGGAGTAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGG
CCAGGATTCAACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATT
GAGTAGCAGCGAGGAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGT
TCGAGGATGGAAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTC
TCCTCTTGA
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Coding sequence (CDS) from alignment at MCQH01000199:1028318..1029576-

>ATCC10864_008565-T1 ID=ATCC10864_008565-T1|Name=ATCC10864_008565-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2388bp|location=Sequence derived from alignment at MCQH01000199:1028318..1029576- (Aspergillus niger ATCC 10864)
ATCTACATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTCTCGC
GGGCCAAACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAATCAT
CCCAGATCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAAGGGC
ACCAACACAACAGTCCGGAACAACTACGGCGTATACATCCACGACTCGAC
CGTAAACGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCCTGCG
CCCTAGGCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAACACA
TACGAAGACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGGATCG
GTGGAGTAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGGCCAG
GATTCAACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGT
AGCAGCGAGGAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGTTCGA
GGATGGAAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTCTCCT
CTTGAATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCC
TCCTCAGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGC
TCGCGAGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCG
TCTCCAACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCC
ATCAATGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTC
CGGCTCCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCC
TCCTGGGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAAC
ACCGTCAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACAT
CGACAACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGA
GTCTCACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCG
TTCGGGAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTA
TGCGCCGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCA
ATGGAGGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTATCTAC
ATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTCTCGCGGGCCA
AACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAATCATCCCAGA
TCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAAGGGCACCAAC
ACAACAGTCCGGAACAACTACGGCGTATACATCCACGACTCGACCGTAAA
CGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCCTGCGCCCTAG
GCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAACACATACGAA
GACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGGATCGGTGGAG
TAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGGCCAGGATTCA
ACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGTAGCAGC
GAGGAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGTTCGAGGATGG
AAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTCTCCTCTTGAA
TGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTCA
GCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCGA
GAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCCA
ACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAAT
GCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCTC
CTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTGG
GCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGTC
AACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACAA
CGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTCA
CCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGGG
AACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGCC
GTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGAG
GGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008565ATCC10864_008565Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008565-T1ATCC10864_008565-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008565-T1.cdsATCC10864_008565-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008565-T1.exon2ATCC10864_008565-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008565-T1.exon1ATCC10864_008565-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01095
InterProIPR012334
InterProIPR011050
InterProIPR000070
Properties
Property NameValue
NoteCAZy:CE8
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1028318..1029576 -
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