You are here

Home

ATCC10864_008580-T1, ATCC10864_008580-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008580-T1
Unique NameATCC10864_008580-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1079896..1081390+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008580-T1 ID=ATCC10864_008580-T1|Name=ATCC10864_008580-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1495bp|location=Sequence derived from alignment at MCQH01000199:1079896..1081390+ (Aspergillus niger ATCC 10864)
ATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGC
CGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGTAGG
TGATTCCCGGTGTTTTATCAGCATCGATAGTGGTTGGTTCCCGCATCTGG
ATGGCTAACTGGCCGCAGGGATATCCAAGTATTGAAGACCTACGGTGCCG
CTCCCTACGCCACGGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGA
CAAGCGAGTGTAAACGAGAAGATTGGCGTCAAGGTATTGAGGTCTGCGAT
ATACGTCATACCGGACACGTCTGACTAGCTGCTTAGGAATCCGATACCGG
TCTTGCGCCTCCACACCTTTGGGATGTTGCTGCGGACCGACAGCGCATGG
CAGAGGAGCAACCGCTGCAGGTAGCTCGTTGTACAAAGATCATTTCGGAT
GAGAAGGACTCGGATAAGAGCAAATATGTTATCAACGTTAAGCAGATCGC
CAAGTTTGTCGTCAACCTTGGGGAACGCGTGAGTCCTACGGATATCGAAG
AGGGCATGAGAGTCGGGTATGACCCTGCAGCTTTGCTATGCATCTTCCCA
TCTAACAGATGACAGTGTCGACCGCAATAAATACCAGATTATGCTACCTC
TCCCTCCCAAGATCGACCCCAGCGTGACGATGATGACTGTCGAGGACAAG
CCCGATGTGACGTACGGCGATGTCGGAGGATGCAAGGAACAAATTGAGAA
GTTGCGAGAAGTCGTCGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTA
ACCTCGGTATCGACCCGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGA
ACTGGTAAGACACTTTGCGCTCGAGCCGTGGCCAACCGAACCGACGCTAC
GTTCATCCGTGTCATTGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGG
GTGCTCGGATGGTCCGTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCG
TGCATTATCTTCTTCGACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGA
CGACGGAGCGGGTGGTGACAACGAAGTTCAACGTACCATGTTGGAGTTGA
TTACGCAGCTGGATGGTTTCGACGCACGTGGTAACATCAAGGTCATGTTC
GCTACCAACCGACCGTCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCG
CATCGACCGTAAGATCGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCA
ACATTCTCCGGATTCACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGG
TGGGAGCTGATTTCGCGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCG
GAGTGTTGCGACAGAGGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGG
TGGCCACGGAGAAGGACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGT
AACCTGAAGTTCAACTCGACGGCGACGTACATGCAGTATAATTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000199:1079896..1081390+

>ATCC10864_008580-T1 ID=ATCC10864_008580-T1|Name=ATCC10864_008580-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5280bp|location=Sequence derived from alignment at MCQH01000199:1079896..1081390+ (Aspergillus niger ATCC 10864)
ATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGC
CGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGGATA
TCCAAGTATTGAAGACCTACGGTGCCGCTCCCTACGCCACGGCATTAAAG
AAGCTCGAAAAACAGATCAAGGACAGACAAGCGAGTGTAAACGAGAAGAT
TGGCGTCAAGGAATCCGATACCGGTCTTGCGCCTCCACACCTTTGGGATG
TTGCTGCGGACCGACAGCGCATGGCAGAGGAGCAACCGCTGCAGGTAGCT
CGTTGTACAAAGATCATTTCGGATGAGAAGGACTCGGATAAGAGCAAATA
TGTTATCAACGTTAAGCAGATCGCCAAGTTTGTCGTCAACCTTGGGGAAC
GCGTGAGTCCTACGGATATCGAAGAGGGCATGAGAGTCGGTGTCGACCGC
AATAAATACCAGATTATGCTACCTCTCCCTCCCAAGATCGACCCCAGCGT
GACGATGATGACTGTCGAGGACAAGCCCGATGTGACGTACGGCGATGTCG
GAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTCGTCGAGATGCCA
TTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGACCCGCCGAAGGG
TGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACACTTTGCGCTCGAG
CCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTCATTGGTAGTGAG
TTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGTCCGTGAGCTTTT
CGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCTTCGACGAAATCG
ATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGTGGTGACAACGAA
GTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGATGGTTTCGACGC
ACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGACCGTCGACTTTGG
ACCCTGCCCTGATGCGTCCTGGTCGCATCGACCGTAAGATCGAGTTCTCG
CTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGATTCACGCCAAGAG
CATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTTCGCGTCTGTGCC
CGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACAGAGGCGGGCATG
TTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAAGGACTTCCTGGC
CGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCAACTCGACGGCGA
CGTACATGCAGTATAATTAGATGCCTAGCGCCACGGGAGAGAACTGGGAG
AAGTACAAGAAGAACTTCGCCGATGACGAAGAGCCAGAGAAGAAGATCAC
CCCTCTTACAGACGAGGATATCCAAGTATTGAAGACCTACGGTGCCGCTC
CCTACGCCACGGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGACAA
GCGAGTGTAAACGAGAAGATTGGCGTCAAGGAATCCGATACCGGTCTTGC
GCCTCCACACCTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGG
AGCAACCGCTGCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAG
GACTCGGATAAGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTT
TGTCGTCAACCTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCA
TGAGAGTCGGTGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCT
CCCAAGATCGACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGA
TGTGACGTACGGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGC
GAGAAGTCGTCGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTC
GGTATCGACCCGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGG
TAAGACACTTTGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCA
TCCGTGTCATTGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCT
CGGATGGTCCGTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCAT
TATCTTCTTCGACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACG
GAGCGGGTGGTGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACG
CAGCTGGATGGTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTAC
CAACCGACCGTCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGCATCG
ACCGTAAGATCGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATT
CTCCGGATTCACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGA
GCTGATTTCGCGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTG
TTGCGACAGAGGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCC
ACGGAGAAGGACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCT
GAAGTTCAACTCGACGGCGACGTACATGCAGTATAATTAGATGCCTAGCG
CCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGCCGATGACGAA
GAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGGATATCCAAGTATT
GAAGACCTACGGTGCCGCTCCCTACGCCACGGCATTAAAGAAGCTCGAAA
AACAGATCAAGGACAGACAAGCGAGTGTAAACGAGAAGATTGGCGTCAAG
GAATCCGATACCGGTCTTGCGCCTCCACACCTTTGGGATGTTGCTGCGGA
CCGACAGCGCATGGCAGAGGAGCAACCGCTGCAGGTAGCTCGTTGTACAA
AGATCATTTCGGATGAGAAGGACTCGGATAAGAGCAAATATGTTATCAAC
GTTAAGCAGATCGCCAAGTTTGTCGTCAACCTTGGGGAACGCGTGAGTCC
TACGGATATCGAAGAGGGCATGAGAGTCGGTGTCGACCGCAATAAATACC
AGATTATGCTACCTCTCCCTCCCAAGATCGACCCCAGCGTGACGATGATG
ACTGTCGAGGACAAGCCCGATGTGACGTACGGCGATGTCGGAGGATGCAA
GGAACAAATTGAGAAGTTGCGAGAAGTCGTCGAGATGCCATTGCTATCGC
CAGAGCGCTTCGTTAACCTCGGTATCGACCCGCCGAAGGGTGCTCTGCTC
TACGGACCTCCCGGAACTGGTAAGACACTTTGCGCTCGAGCCGTGGCCAA
CCGAACCGACGCTACGTTCATCCGTGTCATTGGTAGTGAGTTGGTGCAGA
AGTATGTTGGTGAGGGTGCTCGGATGGTCCGTGAGCTTTTCGAGATGGCC
CGAACAAAGAAGGCGTGCATTATCTTCTTCGACGAAATCGATGCGGTCGG
CGGTGCTCGTTTCGACGACGGAGCGGGTGGTGACAACGAAGTTCAACGTA
CCATGTTGGAGTTGATTACGCAGCTGGATGGTTTCGACGCACGTGGTAAC
ATCAAGGTCATGTTCGCTACCAACCGACCGTCGACTTTGGACCCTGCCCT
GATGCGTCCTGGTCGCATCGACCGTAAGATCGAGTTCTCGCTCCCGGATG
TCGAGGGCCGTGCCAACATTCTCCGGATTCACGCCAAGAGCATGTCGGTG
GAGCGGGACATTCGGTGGGAGCTGATTTCGCGTCTGTGCCCGAACGCTAC
AGGAGCTGAGCTCCGGAGTGTTGCGACAGAGGCGGGCATGTTTGCTATTC
GGGCGCGGCGGAAGGTGGCCACGGAGAAGGACTTCCTGGCCGCGGTGGAC
AAGGTGATCAAGGGTAACCTGAAGTTCAACTCGACGGCGACGTACATGCA
GTATAATTAGATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGA
AGAACTTCGCCGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACA
GACGAGGATATCCAAGTATTGAAGACCTACGGTGCCGCTCCCTACGCCAC
GGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGACAAGCGAGTGTAA
ACGAGAAGATTGGCGTCAAGGAATCCGATACCGGTCTTGCGCCTCCACAC
CTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGGAGCAACCGCT
GCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAGGACTCGGATA
AGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTTTGTCGTCAAC
CTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCATGAGAGTCGG
TGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCTCCCAAGATCG
ACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGATGTGACGTAC
GGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTCGT
CGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGACC
CGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACACTT
TGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTCAT
TGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGTCC
GTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCTTC
GACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGTGG
TGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGATG
GTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGACCG
TCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGCATCGACCGTAAGAT
CGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGATTC
ACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTTCG
CGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACAGA
GGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAAGG
ACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCAAC
TCGACGGCGACGTACATGCAGTATAATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036402proteasome-activating ATPase activity
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT1ATCC10864_008580Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008580-T1.exon1ATCC10864_008580-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008580-T1.exon2ATCC10864_008580-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008580-T1.exon3ATCC10864_008580-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008580-T1.exon4ATCC10864_008580-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008580-T1.cdsATCC10864_008580-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008580-T1ATCC10864_008580-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR035245
InterProIPR005937
InterProIPR027417
PFAMPF00004
InterProIPR003959
InterProIPR003960
InterProIPR003593
Properties
Property NameValue
Product26S proteasome regulatory subunit 7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1079896..1081390 +
Powered by Drupal