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ATCC10864_008596-T1, ATCC10864_008596-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008596-T1
Unique NameATCC10864_008596-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1122729..1123904+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008596-T1 ID=ATCC10864_008596-T1|Name=ATCC10864_008596-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1176bp|location=Sequence derived from alignment at MCQH01000199:1122729..1123904+ (Aspergillus niger ATCC 10864)
ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCT
GGGTCAAGCCCAGAAGCGCATGGCCGCCAACAAAGCCAGTTCACAGCGCC
AGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC
GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAAT
TGGACGAGGCATCACGGCGACGACTGCGAAGCTGCAGAGACTGGCCGAGT
GTGAGTGACTTTTGGACGGTCAGATGAATGGCGCTAATATTATTCGCAGT
GGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAGT
TGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCC
TCGTTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGAA
GGCGGACCAGGAAGGAGAGCATAATGACAATGTACGTGCGACCAATATAA
AGACCGGAACGAAGCTAATGGGTTTAGGTGGTTGTCATGCTACAAGGAAA
ATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAA
AGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGTA
TCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCCCCACT
TTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATC
TACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCATG
CACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGCAACGC
CTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCA
GCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCAG
TCCGACATGATCCAGCGGATAGATGCCAACACGGAAGACGTGGTGGATAA
CGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCG
GGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATGGTAAGCTCA
TCCCGTAACTTGGTGGTCGAATGGCAGCTAACTTGTGCAGATCTTCTTCC
TACTCTGGGTGTTGATATCGGGATAG
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Coding sequence (CDS) from alignment at MCQH01000199:1122729..1123904+

>ATCC10864_008596-T1 ID=ATCC10864_008596-T1|Name=ATCC10864_008596-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4128bp|location=Sequence derived from alignment at MCQH01000199:1122729..1123904+ (Aspergillus niger ATCC 10864)
ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCT
GGGTCAAGCCCAGAAGCGCATGGCCGCCAACAAAGCCAGTTCACAGCGCC
AGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC
GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAAT
TGGACGAGGCATCACGGCGACGACTGCGAAGCTGCAGAGACTGGCCGAGT
TGGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAG
TTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGC
CTCGTTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGA
AGGCGGACCAGGAAGGAGAGCATAATGACAATGTGGTTGTCATGCTACAA
GGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCG
CACAAAGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCT
CAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCC
CCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTC
CGATCTACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCT
CCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGC
AACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCAC
CATCAGCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCG
AGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGACGTGGTG
GATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGT
ATCCGGGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATGATCT
TCTTCCTACTCTGGGTGTTGATATCGGGATAGATGACCGGCCCGTCCATC
CAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCG
CATGGCCGCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATG
CGCAGCGGAAACAAGCAAACGGTTCCGCAGACGGGCAGGGTGGCAAACGA
CGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGC
GACGACTGCGAAGCTGCAGAGACTGGCCGAGTTGGCCAAGCGAAAGACAC
TCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGACGTTTGTGATCAAA
CAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTAC
TCTTTCACAACATCCTAAGAGCAATCGGTCGAAGGCGGACCAGGAAGGAG
AGCATAATGACAATGTGGTTGTCATGCTACAAGGAAAATTGGCAGATGTG
GGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAAAGAACATCCAGGC
CTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACAC
ATTCTGCCCTCGATACGCAGCGCTCCGATTCCCCACTTTACAACACATCT
GGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATCTACTGACTCTGGA
ACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGC
AACTACTGGTCATGGAGGAAGCCCAGACGAGCAACGCCTATATCCAAGGG
CGTGGTGAGGCAATTGATGCGATTGAACGCACCATCAGCGAGCTGGGTGG
TATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCC
AGCGGATAGATGCCAACACGGAAGACGTGGTGGATAACGTGCAGGGAGCG
CATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCGGGAACCGATGGCT
CATCGCCAAGATGTTTGGCGTTCTAATGATCTTCTTCCTACTCTGGGTGT
TGATATCGGGATAGATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAG
TTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCCGCCAACAAAGC
CAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAA
ACGGTTCCGCAGACGGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGG
AGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACTGCGAAGCTGCA
GAGACTGGCCGAGTTGGCCAAGCGAAAGACACTCTTTGACGACAGACCGG
TTGAGATTTCCGAGTTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTG
AATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCACAACATCCTAA
GAGCAATCGGTCGAAGGCGGACCAGGAAGGAGAGCATAATGACAATGTGG
TTGTCATGCTACAAGGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGAC
GTCCTTGAAGTGCGCACAAAGAACATCCAGGCCTCGCGATCCAGAACCGA
GAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCGATACGC
AGCGCTCCGATTCCCCACTTTACAACACATCTGGACGGCGGACGCCCCAG
CCGGGCGGCGCTTCCGATCTACTGACTCTGGAACCCTCGAACCCGTCTCC
ACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCATGGAGG
AAGCCCAGACGAGCAACGCCTATATCCAAGGGCGTGGTGAGGCAATTGAT
GCGATTGAACGCACCATCAGCGAGCTGGGTGGTATCTTCGGCCAGCTTGC
GCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATGCCAACA
CGGAAGACGTGGTGGATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAG
TACTGGACGCGGGTATCCGGGAACCGATGGCTCATCGCCAAGATGTTTGG
CGTTCTAATGATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAGATGA
CCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGT
CAAGCCCAGAAGCGCATGGCCGCCAACAAAGCCAGTTCACAGCGCCAGGC
TCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGACGGGC
AGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGA
CGAGGCATCACGGCGACGACTGCGAAGCTGCAGAGACTGGCCGAGTTGGC
CAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGA
CGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCG
TTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGAAGGC
GGACCAGGAAGGAGAGCATAATGACAATGTGGTTGTCATGCTACAAGGAA
AATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACA
AAGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGT
ATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCCCCAC
TTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGAT
CTACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCAT
GCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGCAACG
CCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATC
AGCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCA
GTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGACGTGGTGGATA
ACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCC
GGGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATGATCTTCTT
CCTACTCTGGGTGTTGATATCGGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008596ATCC10864_008596Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008596-T1.exon1ATCC10864_008596-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008596-T1.exon2ATCC10864_008596-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008596-T1.exon3ATCC10864_008596-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008596-T1.exon4ATCC10864_008596-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008596-T1.cdsATCC10864_008596-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008596-T1ATCC10864_008596-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR010989
PFAMPF11416
InterProIPR000727
PFAMPF05739
InterProIPR021538
Properties
Property NameValue
NoteBUSCO:EOG09263J3H
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1122729..1123904 +
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