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ATCC10864_008617-T1, ATCC10864_008617-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008617-T1
Unique NameATCC10864_008617-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1182953..1184837-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008617-T1 ID=ATCC10864_008617-T1|Name=ATCC10864_008617-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1885bp|location=Sequence derived from alignment at MCQH01000199:1182953..1184837- (Aspergillus niger ATCC 10864)
ATGGCCAAATCCGCCTCCCAGATTCACCGCGCCTGGTGGAAGGAATGCTC
CGTCTATCAGATCTGGCCTGCTTCGTACAAGGATTCCAACGATGATGGTA
TCGGTGACATTCCAGGCATTATCTCGAAGCTGGATTATATCAAGAATATA
GGCGTGGATATTGTTTGGTTGTGTCCTTCCTATAAGTCGCCTCAGGTGGA
TATGGGCTATGACATTGCCGATTACTATAGCATTGCGGATGAGTACGGCA
CGGTCGCGGATGTCGAAAAGCTCATCCAGGGGTGCCACGAGCGGGGTATG
AAGCTTCTTATGGACCTTGTGGTCAACCACACTAGTGATCAGAATGAGTG
GTTCAAACAGTCGCGCAGCTCAAAGGACAATAAGTATCGCAACTGGTATG
TTTGGAAGCCGGCCAGGTATGATGAGCAGGGTAACCGGCACCCGCCTAAC
AACTGGGTGTCGCATTTTCAGGGTGAGTTTCTTGCTTTGATTTGAAGTCA
TTCATTTTTTTGGAGTAAGCTTTCTGACCCTGGCTGTAGGTAGTGCCTGG
GAATGGGACGAGCACACGGGTGAATACTACCTTCACCTCTACGCGACAGA
ACAGCCCGACCTCAACTGGGAGCATCCGCCCGTCCGTAAGGCAGTTCACG
ATATCATGCGTTTCTGGCTAGACAAAGGCGCGGATGGATTCCGCATGGAT
GTCATCAATTTCATCAGCAAAGACCAACGGTTCCCGGATGCTCCTGTAAA
GGACCCTCGAACCCCTTGGCAGTGGGGAGACAAGTACTACGCCAATGGAC
CGAGATTACATGAATATCTCCAAGACCTGGGGAAGATTCTGAAGGAGTAC
GATGCCTTCAGTGTTGGTGAGATGCCCTTCGTCAGAGACACCGAGGAGGT
GCTCCGCGCTGTGCGCTACGATCGGAACGAGATCAACATGATTTTCAACT
TCGAGCATGTGGACATTGACCACGGAACATACGACAAATTCGAGCCTGGA
AGCTGGAAGCTCACTGACTTGAAGGCTTTCTTCGAGACGTGGCAGAAGTT
CATGTACAACAATGATGGGTGGAATGCTCTTTACTGGGAGAACCACGATC
AGCCGCGGTCGATTGATCGCTATGCACAAGCAAAGGAGGAGTTCCGCACA
GAAGCAGGTAAAATGCTGGCGACGGTTCTTGCGCTGCAGTCTGGTACGCC
GTTCGTGTACCAGGGTCAGGAAATTGGAATGAGAAATGTTCCCGTTGAAT
GGGACATGAACGAGTACAAGGATATTGACTGTCTCAACCACTGGCATCGG
TAGGCATATGTCCCCACCCGTCTAGATAGGTCGCTTACTAACTGCGCCTT
TAGCCTTCTCAAGCACAGGCCCGATGATATCGAAGCCCAGAAGAGCGCCC
GTCAGGAATACCAAAAGAAATCCCGAGACAACGGCCGCACACCGGTGCAG
TGGTCAAGTGCACCAAACGGTGGGTTCACCGGTCCCAACGCAAAGCCTTG
GATGTCCGTCAACCCGGACTATGTGCGCTTCAATGCTGAAGCGCAGGTCA
ATGACCCGAACTCGATCTACCACTACTGGGCTGCTGTCCTTGGATTGCGC
AAGAAATACCTCGACATCTTTGTCTATGGGGACTACGACTTGGTCGATAA
GGATAGTCAGGAGATCTTCGCGTATGCTCGTCAATATGAGAACAAGAAGG
CGCTGGTTCTCACTAACTGGACTGAGAAGACATTGGAGTGGGATGCTACT
ACCAACGGCGTGAAGGGCGTCAAGGATGTGCTATTGAACTCGTATGAAAG
TGCTGAAGCAGCGAAGGGGCGGTTCTCGGGACAGAAGTGGTCTCTACGCC
CGTATGAAGCAGTTGTTCTTTTGGTGGAGGCTTGA
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Coding sequence (CDS) from alignment at MCQH01000199:1182953..1184837-

>ATCC10864_008617-T1 ID=ATCC10864_008617-T1|Name=ATCC10864_008617-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5292bp|location=Sequence derived from alignment at MCQH01000199:1182953..1184837- (Aspergillus niger ATCC 10864)
CCTTCTCAAGCACAGGCCCGATGATATCGAAGCCCAGAAGAGCGCCCGTC
AGGAATACCAAAAGAAATCCCGAGACAACGGCCGCACACCGGTGCAGTGG
TCAAGTGCACCAAACGGTGGGTTCACCGGTCCCAACGCAAAGCCTTGGAT
GTCCGTCAACCCGGACTATGTGCGCTTCAATGCTGAAGCGCAGGTCAATG
ACCCGAACTCGATCTACCACTACTGGGCTGCTGTCCTTGGATTGCGCAAG
AAATACCTCGACATCTTTGTCTATGGGGACTACGACTTGGTCGATAAGGA
TAGTCAGGAGATCTTCGCGTATGCTCGTCAATATGAGAACAAGAAGGCGC
TGGTTCTCACTAACTGGACTGAGAAGACATTGGAGTGGGATGCTACTACC
AACGGCGTGAAGGGCGTCAAGGATGTGCTATTGAACTCGTATGAAAGTGC
TGAAGCAGCGAAGGGGCGGTTCTCGGGACAGAAGTGGTCTCTACGCCCGT
ATGAAGCAGTTGTTCTTTTGGTGGAGGCTTGAGTAGTGCCTGGGAATGGG
ACGAGCACACGGGTGAATACTACCTTCACCTCTACGCGACAGAACAGCCC
GACCTCAACTGGGAGCATCCGCCCGTCCGTAAGGCAGTTCACGATATCAT
GCGTTTCTGGCTAGACAAAGGCGCGGATGGATTCCGCATGGATGTCATCA
ATTTCATCAGCAAAGACCAACGGTTCCCGGATGCTCCTGTAAAGGACCCT
CGAACCCCTTGGCAGTGGGGAGACAAGTACTACGCCAATGGACCGAGATT
ACATGAATATCTCCAAGACCTGGGGAAGATTCTGAAGGAGTACGATGCCT
TCAGTGTTGGTGAGATGCCCTTCGTCAGAGACACCGAGGAGGTGCTCCGC
GCTGTGCGCTACGATCGGAACGAGATCAACATGATTTTCAACTTCGAGCA
TGTGGACATTGACCACGGAACATACGACAAATTCGAGCCTGGAAGCTGGA
AGCTCACTGACTTGAAGGCTTTCTTCGAGACGTGGCAGAAGTTCATGTAC
AACAATGATGGGTGGAATGCTCTTTACTGGGAGAACCACGATCAGCCGCG
GTCGATTGATCGCTATGCACAAGCAAAGGAGGAGTTCCGCACAGAAGCAG
GTAAAATGCTGGCGACGGTTCTTGCGCTGCAGTCTGGTACGCCGTTCGTG
TACCAGGGTCAGGAAATTGGAATGAGAAATGTTCCCGTTGAATGGGACAT
GAACGAGTACAAGGATATTGACTGTCTCAACCACTGGCATCGATGGCCAA
ATCCGCCTCCCAGATTCACCGCGCCTGGTGGAAGGAATGCTCCGTCTATC
AGATCTGGCCTGCTTCGTACAAGGATTCCAACGATGATGGTATCGGTGAC
ATTCCAGGCATTATCTCGAAGCTGGATTATATCAAGAATATAGGCGTGGA
TATTGTTTGGTTGTGTCCTTCCTATAAGTCGCCTCAGGTGGATATGGGCT
ATGACATTGCCGATTACTATAGCATTGCGGATGAGTACGGCACGGTCGCG
GATGTCGAAAAGCTCATCCAGGGGTGCCACGAGCGGGGTATGAAGCTTCT
TATGGACCTTGTGGTCAACCACACTAGTGATCAGAATGAGTGGTTCAAAC
AGTCGCGCAGCTCAAAGGACAATAAGTATCGCAACTGGTATGTTTGGAAG
CCGGCCAGGTATGATGAGCAGGGTAACCGGCACCCGCCTAACAACTGGGT
GTCGCATTTTCAGGCCTTCTCAAGCACAGGCCCGATGATATCGAAGCCCA
GAAGAGCGCCCGTCAGGAATACCAAAAGAAATCCCGAGACAACGGCCGCA
CACCGGTGCAGTGGTCAAGTGCACCAAACGGTGGGTTCACCGGTCCCAAC
GCAAAGCCTTGGATGTCCGTCAACCCGGACTATGTGCGCTTCAATGCTGA
AGCGCAGGTCAATGACCCGAACTCGATCTACCACTACTGGGCTGCTGTCC
TTGGATTGCGCAAGAAATACCTCGACATCTTTGTCTATGGGGACTACGAC
TTGGTCGATAAGGATAGTCAGGAGATCTTCGCGTATGCTCGTCAATATGA
GAACAAGAAGGCGCTGGTTCTCACTAACTGGACTGAGAAGACATTGGAGT
GGGATGCTACTACCAACGGCGTGAAGGGCGTCAAGGATGTGCTATTGAAC
TCGTATGAAAGTGCTGAAGCAGCGAAGGGGCGGTTCTCGGGACAGAAGTG
GTCTCTACGCCCGTATGAAGCAGTTGTTCTTTTGGTGGAGGCTTGAGTAG
TGCCTGGGAATGGGACGAGCACACGGGTGAATACTACCTTCACCTCTACG
CGACAGAACAGCCCGACCTCAACTGGGAGCATCCGCCCGTCCGTAAGGCA
GTTCACGATATCATGCGTTTCTGGCTAGACAAAGGCGCGGATGGATTCCG
CATGGATGTCATCAATTTCATCAGCAAAGACCAACGGTTCCCGGATGCTC
CTGTAAAGGACCCTCGAACCCCTTGGCAGTGGGGAGACAAGTACTACGCC
AATGGACCGAGATTACATGAATATCTCCAAGACCTGGGGAAGATTCTGAA
GGAGTACGATGCCTTCAGTGTTGGTGAGATGCCCTTCGTCAGAGACACCG
AGGAGGTGCTCCGCGCTGTGCGCTACGATCGGAACGAGATCAACATGATT
TTCAACTTCGAGCATGTGGACATTGACCACGGAACATACGACAAATTCGA
GCCTGGAAGCTGGAAGCTCACTGACTTGAAGGCTTTCTTCGAGACGTGGC
AGAAGTTCATGTACAACAATGATGGGTGGAATGCTCTTTACTGGGAGAAC
CACGATCAGCCGCGGTCGATTGATCGCTATGCACAAGCAAAGGAGGAGTT
CCGCACAGAAGCAGGTAAAATGCTGGCGACGGTTCTTGCGCTGCAGTCTG
GTACGCCGTTCGTGTACCAGGGTCAGGAAATTGGAATGAGAAATGTTCCC
GTTGAATGGGACATGAACGAGTACAAGGATATTGACTGTCTCAACCACTG
GCATCGATGGCCAAATCCGCCTCCCAGATTCACCGCGCCTGGTGGAAGGA
ATGCTCCGTCTATCAGATCTGGCCTGCTTCGTACAAGGATTCCAACGATG
ATGGTATCGGTGACATTCCAGGCATTATCTCGAAGCTGGATTATATCAAG
AATATAGGCGTGGATATTGTTTGGTTGTGTCCTTCCTATAAGTCGCCTCA
GGTGGATATGGGCTATGACATTGCCGATTACTATAGCATTGCGGATGAGT
ACGGCACGGTCGCGGATGTCGAAAAGCTCATCCAGGGGTGCCACGAGCGG
GGTATGAAGCTTCTTATGGACCTTGTGGTCAACCACACTAGTGATCAGAA
TGAGTGGTTCAAACAGTCGCGCAGCTCAAAGGACAATAAGTATCGCAACT
GGTATGTTTGGAAGCCGGCCAGGTATGATGAGCAGGGTAACCGGCACCCG
CCTAACAACTGGGTGTCGCATTTTCAGGCCTTCTCAAGCACAGGCCCGAT
GATATCGAAGCCCAGAAGAGCGCCCGTCAGGAATACCAAAAGAAATCCCG
AGACAACGGCCGCACACCGGTGCAGTGGTCAAGTGCACCAAACGGTGGGT
TCACCGGTCCCAACGCAAAGCCTTGGATGTCCGTCAACCCGGACTATGTG
CGCTTCAATGCTGAAGCGCAGGTCAATGACCCGAACTCGATCTACCACTA
CTGGGCTGCTGTCCTTGGATTGCGCAAGAAATACCTCGACATCTTTGTCT
ATGGGGACTACGACTTGGTCGATAAGGATAGTCAGGAGATCTTCGCGTAT
GCTCGTCAATATGAGAACAAGAAGGCGCTGGTTCTCACTAACTGGACTGA
GAAGACATTGGAGTGGGATGCTACTACCAACGGCGTGAAGGGCGTCAAGG
ATGTGCTATTGAACTCGTATGAAAGTGCTGAAGCAGCGAAGGGGCGGTTC
TCGGGACAGAAGTGGTCTCTACGCCCGTATGAAGCAGTTGTTCTTTTGGT
GGAGGCTTGAGTAGTGCCTGGGAATGGGACGAGCACACGGGTGAATACTA
CCTTCACCTCTACGCGACAGAACAGCCCGACCTCAACTGGGAGCATCCGC
CCGTCCGTAAGGCAGTTCACGATATCATGCGTTTCTGGCTAGACAAAGGC
GCGGATGGATTCCGCATGGATGTCATCAATTTCATCAGCAAAGACCAACG
GTTCCCGGATGCTCCTGTAAAGGACCCTCGAACCCCTTGGCAGTGGGGAG
ACAAGTACTACGCCAATGGACCGAGATTACATGAATATCTCCAAGACCTG
GGGAAGATTCTGAAGGAGTACGATGCCTTCAGTGTTGGTGAGATGCCCTT
CGTCAGAGACACCGAGGAGGTGCTCCGCGCTGTGCGCTACGATCGGAACG
AGATCAACATGATTTTCAACTTCGAGCATGTGGACATTGACCACGGAACA
TACGACAAATTCGAGCCTGGAAGCTGGAAGCTCACTGACTTGAAGGCTTT
CTTCGAGACGTGGCAGAAGTTCATGTACAACAATGATGGGTGGAATGCTC
TTTACTGGGAGAACCACGATCAGCCGCGGTCGATTGATCGCTATGCACAA
GCAAAGGAGGAGTTCCGCACAGAAGCAGGTAAAATGCTGGCGACGGTTCT
TGCGCTGCAGTCTGGTACGCCGTTCGTGTACCAGGGTCAGGAAATTGGAA
TGAGAAATGTTCCCGTTGAATGGGACATGAACGAGTACAAGGATATTGAC
TGTCTCAACCACTGGCATCGATGGCCAAATCCGCCTCCCAGATTCACCGC
GCCTGGTGGAAGGAATGCTCCGTCTATCAGATCTGGCCTGCTTCGTACAA
GGATTCCAACGATGATGGTATCGGTGACATTCCAGGCATTATCTCGAAGC
TGGATTATATCAAGAATATAGGCGTGGATATTGTTTGGTTGTGTCCTTCC
TATAAGTCGCCTCAGGTGGATATGGGCTATGACATTGCCGATTACTATAG
CATTGCGGATGAGTACGGCACGGTCGCGGATGTCGAAAAGCTCATCCAGG
GGTGCCACGAGCGGGGTATGAAGCTTCTTATGGACCTTGTGGTCAACCAC
ACTAGTGATCAGAATGAGTGGTTCAAACAGTCGCGCAGCTCAAAGGACAA
TAAGTATCGCAACTGGTATGTTTGGAAGCCGGCCAGGTATGATGAGCAGG
GTAACCGGCACCCGCCTAACAACTGGGTGTCGCATTTTCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008617ATCC10864_008617Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008617-T1ATCC10864_008617-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008617-T1.cdsATCC10864_008617-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008617-T1.exon3ATCC10864_008617-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008617-T1.exon2ATCC10864_008617-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008617-T1.exon1ATCC10864_008617-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00128
InterProIPR017853
InterProIPR013780
InterProIPR006047
Properties
Property NameValue
NoteCAZy:GH13
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1182953..1184837 -
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