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ATCC10864_008618-T1, ATCC10864_008618-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008618-T1
Unique NameATCC10864_008618-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1186265..1187170-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008618-T1 ID=ATCC10864_008618-T1|Name=ATCC10864_008618-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=906bp|location=Sequence derived from alignment at MCQH01000199:1186265..1187170- (Aspergillus niger ATCC 10864)
ATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCATATGTCGC
CGAGTTCCTCGGAACGGCACTCCTGATCGTCATCGGCGATGGCGTCGTCG
CTCAGTGTCTCCTTTCCGACTACCAGTACGGCACTTGGCTATCGATCAAC
ATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCCGACCCCGG
TCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGTCCGTCCCA
CTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTCAATTCCTT
GGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGCTCCGCCAT
CAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAATCCTGAGCC
CTCGTGGACACCATTCTGCCGGTATCTTCTCAACTTATCCTGCTGCATTC
TTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTCGGGTCTGCAGT
CCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGCCGTCAGAT
TCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTCACTGCTATTGGAGCT
GCGTTGGGCTGGCAGACTGGCTATGTAGGTTCCTCCGATAATTGAGTTCA
GTGATCGAAGCTAAATCTACAGGCTATCAACCCCGCGAGAGATTTCGGTC
CCAGACTGTTCTCTGCTTTCATCTATGGCAGGGAGGTTTTTACCGCGGCC
AACTATTACTTCGTTGTGCCCATCTTTGCCCCCATTGTAGGTTGTATCGT
CGGAGCCGCCACTTACGACACATTCCTCTATGAGGGAGACGGGTCGCGCA
TCACCGATGCTCTGGACAATGTCGAGGATCGCGACGGTGCTCTGCGGCTG
CACTAA
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Coding sequence (CDS) from alignment at MCQH01000199:1186265..1187170-

>ATCC10864_008618-T1 ID=ATCC10864_008618-T1|Name=ATCC10864_008618-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1716bp|location=Sequence derived from alignment at MCQH01000199:1186265..1187170- (Aspergillus niger ATCC 10864)
GCTATCAACCCCGCGAGAGATTTCGGTCCCAGACTGTTCTCTGCTTTCAT
CTATGGCAGGGAGGTTTTTACCGCGGCCAACTATTACTTCGTTGTGCCCA
TCTTTGCCCCCATTGTAGGTTGTATCGTCGGAGCCGCCACTTACGACACA
TTCCTCTATGAGGGAGACGGGTCGCGCATCACCGATGCTCTGGACAATGT
CGAGGATCGCGACGGTGCTCTGCGGCTGCACTAAATGTTTCTCAACACTG
GCCTCTCGCGAAAATTCCTCAAACCATATGTCGCCGAGTTCCTCGGAACG
GCACTCCTGATCGTCATCGGCGATGGCGTCGTCGCTCAGTGTCTCCTTTC
CGACTACCAGTACGGCACTTGGCTATCGATCAACATCGCCTGGGCTGCAG
CTGTCTGCATCTCAGGCTACCTTTCCGACCCCGGTCCAACCATCAACCCA
GCTGTGACTATCTGCATGGCTCTTGTCCGTCCCACTCCCGGACAATGGCG
TAAACTTCCCGGCAAGCTCTTTGCTCAATTCCTTGGTGGATTTGTTGGTG
CTGCCATTGTGTATATCAACTACCGCTCCGCCATCAAAGACTGGGATCCC
GAGTTTACCATTCCTGGCGGCTCAATCCTGAGCCCTCGTGGACACCATTC
TGCCGGTATCTTCTCAACTTATCCTGCTGCATTCTTCGAATCGAACTGGG
AGGCCGCATTCTCGGAGTTGCTCGGGTCTGCAGTCCTGATGTTTGGCATC
TTGAGCATCTCGGATCCGGTCAATGCCGTCAGATTCCATTCGCCTCAGGT
GACGGTATTCTTCTTGCTCACTGCTATTGGAGCTGCGTTGGGCTGGCAGA
CTGGCTATGCTATCAACCCCGCGAGAGATTTCGGTCCCAGACTGTTCTCT
GCTTTCATCTATGGCAGGGAGGTTTTTACCGCGGCCAACTATTACTTCGT
TGTGCCCATCTTTGCCCCCATTGTAGGTTGTATCGTCGGAGCCGCCACTT
ACGACACATTCCTCTATGAGGGAGACGGGTCGCGCATCACCGATGCTCTG
GACAATGTCGAGGATCGCGACGGTGCTCTGCGGCTGCACTAAATGTTTCT
CAACACTGGCCTCTCGCGAAAATTCCTCAAACCATATGTCGCCGAGTTCC
TCGGAACGGCACTCCTGATCGTCATCGGCGATGGCGTCGTCGCTCAGTGT
CTCCTTTCCGACTACCAGTACGGCACTTGGCTATCGATCAACATCGCCTG
GGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCCGACCCCGGTCCAACCA
TCAACCCAGCTGTGACTATCTGCATGGCTCTTGTCCGTCCCACTCCCGGA
CAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTCAATTCCTTGGTGGATT
TGTTGGTGCTGCCATTGTGTATATCAACTACCGCTCCGCCATCAAAGACT
GGGATCCCGAGTTTACCATTCCTGGCGGCTCAATCCTGAGCCCTCGTGGA
CACCATTCTGCCGGTATCTTCTCAACTTATCCTGCTGCATTCTTCGAATC
GAACTGGGAGGCCGCATTCTCGGAGTTGCTCGGGTCTGCAGTCCTGATGT
TTGGCATCTTGAGCATCTCGGATCCGGTCAATGCCGTCAGATTCCATTCG
CCTCAGGTGACGGTATTCTTCTTGCTCACTGCTATTGGAGCTGCGTTGGG
CTGGCAGACTGGCTAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008618ATCC10864_008618Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008618-T1ATCC10864_008618-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008618-T1.cdsATCC10864_008618-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008618-T1.exon2ATCC10864_008618-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008618-T1.exon1ATCC10864_008618-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00230
InterProIPR000425
InterProIPR023271
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1186265..1187170 -
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