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ATCC10864_008654-T1, ATCC10864_008654-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008654-T1
Unique NameATCC10864_008654-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1276827..1278305+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008654-T1 ID=ATCC10864_008654-T1|Name=ATCC10864_008654-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1479bp|location=Sequence derived from alignment at MCQH01000199:1276827..1278305+ (Aspergillus niger ATCC 10864)
ATGAAATTAATCGCTCTCAGCCTAATGAGCCTGCAGTGCGTGGCGAGCAT
GCGGTTCGCCATGTACGTTGATGAGTGAGTACTAACAACATCCTCATATT
ATCTCCAATCATACGCATCTAACAACAACGGGGAATCAGGTACCACACAA
GTGGCCTCCCCGGCGCCAACCAAACCCAAGGCATCACGCATGCTATCATG
GCTTTCGCCCAGTCTACGCTCTTCAATTCTGACTCTCCCCCACAATTTAC
TCCCTTCGAGTCTGTCTCCACCATGCGCAGTCGCTTCAGCCCGGGGACTA
AGCTCATGATCGCCATCGGCGGATGGGGTGATACCTCAGGGTTCTCGACG
GCCGCGAAAGATGAGACTTCTCGCAACCAGTATGCGAAGAATGTAGCGGC
TATGGTGAATCAGGTTGGTTTCGATGGTGTTGGTATGTCTCTATACACGT
CCTCACCATCCCTCCCGTAACTGGTATTGACCAAAAATGTATAGACATAG
ATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGACAACACCGAAC
AGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTCCTGCAAGCGCT
GCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGCGGTCCCTGGCA
AGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCCCGCAGATCTGG
CCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTCATGAACCGCCG
GAATAATGTCACTATGCACCATACATCTGTCGTGGATTCATTTAATACAG
TGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGACAAACTTGGGA
ATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGCGATGAGCAGGA
GTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAATGGAGAACGCGG
ATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTGAAAAGAGTGTT
ATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGATGGCACGTGTGG
ATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTGCAGTCAGTACG
GAAACTGGTATGTCGACTACTCCTACTCTCCTTGCGAACGGTGTATGCTA
ATATGTGGCGATGTAGCGGTACAACCGACGACTTCTGCCAAGCAGGTTGT
CTATCTGATTACGGAACATGCAAAGGCATCTCGATTACGGATTCATGGCG
GCGCGCGCAAGAAAACGCTAAATTGGATGATGTCATGGGTGGAGAGTACT
ACTTCGATGACCAGGTCAATGTGTTCTGGACGTGGGATACCGCAGACATG
ATTGCACGCAAGTTCACCGATATCGTCGATAAGCTGGGACTAGGAGGTGT
TATGGCGTGGAGTTTGGGAGAGGATACGCTGGCATGGGAGCATTTGGGAG
CCATGCAGGAGGGTGTTGCTGCCAGGTAG
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Coding sequence (CDS) from alignment at MCQH01000199:1276827..1278305+

>ATCC10864_008654-T1 ID=ATCC10864_008654-T1|Name=ATCC10864_008654-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5172bp|location=Sequence derived from alignment at MCQH01000199:1276827..1278305+ (Aspergillus niger ATCC 10864)
ATGAAATTAATCGCTCTCAGCCTAATGAGCCTGCAGTGCGTGGCGAGCAT
GCGGTTCGCCATGTACGTTGATGAGTACCACACAAGTGGCCTCCCCGGCG
CCAACCAAACCCAAGGCATCACGCATGCTATCATGGCTTTCGCCCAGTCT
ACGCTCTTCAATTCTGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGT
CTCCACCATGCGCAGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCA
TCGGCGGATGGGGTGATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAG
ACTTCTCGCAACCAGTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGT
TGGTTTCGATGGTGTTGACATAGATTGGGAATACCCCGGCGGTAATGGCC
AAGACTACAAGACAACACCGAACAGTGCCAAAGTGTCTGAAATAACCACC
TACCCTTTATTCCTGCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACT
CCTCTCTATTGCGGTCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCA
ACACCACAGGCCCGCAGATCTGGCCCTCAGTCGATATGGTGAACATCATG
TCGTACGATCTCATGAACCGCCGGAATAATGTCACTATGCACCATACATC
TGTCGTGGATTCATTTAATACAGTGCAGGCGTATCGGGATATTGGCCTCC
CTGGTAATAAGACAAACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAG
ACAGATCCCAGCGATGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAA
GGTTGTCGTAATGGAGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGA
GTTTGACTTTTGAAAAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAG
ACGAGTACGGATGGCACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGC
TGGAAGTTGCTGCAGTCAGTACGGAAACTGCGGTACAACCGACGACTTCT
GCCAAGCAGGTTGTCTATCTGATTACGGAACATGCAAAGGCATCTCGATT
ACGGATTCATGGCGGCGCGCGCAAGAAAACGCTAAATTGGATGATGTCAT
GGGTGGAGAGTACTACTTCGATGACCAGGTCAATGTGTTCTGGACGTGGG
ATACCGCAGACATGATTGCACGCAAGTTCACCGATATCGTCGATAAGCTG
GGACTAGGAGGTGTTATGGCGTGGAGTTTGGGAGAGGATACGCTGGCATG
GGAGCATTTGGGAGCCATGCAGGAGGGTGTTGCTGCCAGGTAGATGAAAT
TAATCGCTCTCAGCCTAATGAGCCTGCAGTGCGTGGCGAGCATGCGGTTC
GCCATGTACGTTGATGAGTACCACACAAGTGGCCTCCCCGGCGCCAACCA
AACCCAAGGCATCACGCATGCTATCATGGCTTTCGCCCAGTCTACGCTCT
TCAATTCTGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGTCTCCACC
ATGCGCAGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCATCGGCGG
ATGGGGTGATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAGACTTCTC
GCAACCAGTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGTTGGTTTC
GATGGTGTTGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTA
CAAGACAACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTT
TATTCCTGCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCT
ATTGCGGTCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACACCAC
AGGCCCGCAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACG
ATCTCATGAACCGCCGGAATAATGTCACTATGCACCATACATCTGTCGTG
GATTCATTTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAA
TAAGACAAACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATC
CCAGCGATGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTC
GTAATGGAGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGAC
TTTTGAAAAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTA
CGGATGGCACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGT
TGCTGCAGTCAGTACGGAAACTGCGGTACAACCGACGACTTCTGCCAAGC
AGGTTGTCTATCTGATTACGGAACATGCAAAGGCATCTCGATTACGGATT
CATGGCGGCGCGCGCAAGAAAACGCTAAATTGGATGATGTCATGGGTGGA
GAGTACTACTTCGATGACCAGGTCAATGTGTTCTGGACGTGGGATACCGC
AGACATGATTGCACGCAAGTTCACCGATATCGTCGATAAGCTGGGACTAG
GAGGTGTTATGGCGTGGAGTTTGGGAGAGGATACGCTGGCATGGGAGCAT
TTGGGAGCCATGCAGGAGGGTGTTGCTGCCAGGTAGATGAAATTAATCGC
TCTCAGCCTAATGAGCCTGCAGTGCGTGGCGAGCATGCGGTTCGCCATGT
ACGTTGATGAGTACCACACAAGTGGCCTCCCCGGCGCCAACCAAACCCAA
GGCATCACGCATGCTATCATGGCTTTCGCCCAGTCTACGCTCTTCAATTC
TGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGTCTCCACCATGCGCA
GTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCATCGGCGGATGGGGT
GATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAGACTTCTCGCAACCA
GTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGTTGGTTTCGATGGTG
TTGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGACA
ACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTCCT
GCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGCGG
TCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCCCG
CAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTCAT
GAACCGCCGGAATAATGTCACTATGCACCATACATCTGTCGTGGATTCAT
TTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGACA
AACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGCGA
TGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAATGG
AGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTGAA
AAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGATGG
CACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTGCA
GTCAGTACGGAAACTGCGGTACAACCGACGACTTCTGCCAAGCAGGTTGT
CTATCTGATTACGGAACATGCAAAGGCATCTCGATTACGGATTCATGGCG
GCGCGCGCAAGAAAACGCTAAATTGGATGATGTCATGGGTGGAGAGTACT
ACTTCGATGACCAGGTCAATGTGTTCTGGACGTGGGATACCGCAGACATG
ATTGCACGCAAGTTCACCGATATCGTCGATAAGCTGGGACTAGGAGGTGT
TATGGCGTGGAGTTTGGGAGAGGATACGCTGGCATGGGAGCATTTGGGAG
CCATGCAGGAGGGTGTTGCTGCCAGGTAGATGAAATTAATCGCTCTCAGC
CTAATGAGCCTGCAGTGCGTGGCGAGCATGCGGTTCGCCATGTACGTTGA
TGAGTACCACACAAGTGGCCTCCCCGGCGCCAACCAAACCCAAGGCATCA
CGCATGCTATCATGGCTTTCGCCCAGTCTACGCTCTTCAATTCTGACTCT
CCCCCACAATTTACTCCCTTCGAGTCTGTCTCCACCATGCGCAGTCGCTT
CAGCCCGGGGACTAAGCTCATGATCGCCATCGGCGGATGGGGTGATACCT
CAGGGTTCTCGACGGCCGCGAAAGATGAGACTTCTCGCAACCAGTATGCG
AAGAATGTAGCGGCTATGGTGAATCAGGTTGGTTTCGATGGTGTTGACAT
AGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGACAACACCGA
ACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTCCTGCAAGCG
CTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGCGGTCCCTGG
CAAGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCCCGCAGATCT
GGCCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTCATGAACCGC
CGGAATAATGTCACTATGCACCATACATCTGTCGTGGATTCATTTAATAC
AGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGACAAACTTGG
GAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGCGATGAGCAG
GAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAATGGAGAACGC
GGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTGAAAAGAGTG
TTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGATGGCACGTGT
GGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTGCAGTCAGTA
CGGAAACTGCGGTACAACCGACGACTTCTGCCAAGCAGGTTGTCTATCTG
ATTACGGAACATGCAAAGGCATCTCGATTACGGATTCATGGCGGCGCGCG
CAAGAAAACGCTAAATTGGATGATGTCATGGGTGGAGAGTACTACTTCGA
TGACCAGGTCAATGTGTTCTGGACGTGGGATACCGCAGACATGATTGCAC
GCAAGTTCACCGATATCGTCGATAAGCTGGGACTAGGAGGTGTTATGGCG
TGGAGTTTGGGAGAGGATACGCTGGCATGGGAGCATTTGGGAGCCATGCA
GGAGGGTGTTGCTGCCAGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008654ATCC10864_008654Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008654-T1.exon1ATCC10864_008654-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008654-T1.exon2ATCC10864_008654-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008654-T1.exon3ATCC10864_008654-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008654-T1.exon4ATCC10864_008654-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008654-T1.cdsATCC10864_008654-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008654-T1ATCC10864_008654-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00704
InterProIPR011583
InterProIPR001579
PFAMPF00187
InterProIPR001223
InterProIPR018371
InterProIPR036861
InterProIPR017853
InterProIPR001002
Properties
Property NameValue
NoteCAZy:GH18
NoteSECRETED:SignalP(1-16)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1276827..1278305 +
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