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ATCC10864_008674-T1, ATCC10864_008674-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008674-T1
Unique NameATCC10864_008674-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1340539..1341483-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008674-T1 ID=ATCC10864_008674-T1|Name=ATCC10864_008674-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=945bp|location=Sequence derived from alignment at MCQH01000199:1340539..1341483- (Aspergillus niger ATCC 10864)
ATGGCCCCCGTCCCGTGAGTATACGACCGGCGATCAACCACATCTGTATC
GCATCATTCTAATGGCAATTTTCTCAACAGCCGCGTTTACTCCAAGACCT
ACAAGGTCCCCCGTCGTCGTAAGTAGCCTTATCAGTCTTTGCAAAAATTC
GAGACTTTGCGACATTGAATCTTGGACTAACATATCGGTATAGCTTTCGA
GTCGGCCCGTCTGTTAGTACTCTCCGGCCACTGATCAGAAGCGTGCTTCT
GTTTATGTCGTGTGTTCCCATGCCTAACTGTCATCGCTAGTGACTCGGAA
CTGAAGATTGTCGGCGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCG
TGTCCAGCTCACCCTGTCCAAGATTCGTCGTGCTGCTCGGTATGCGCACC
CCACTTCGCATGGATCATCGACCTTGAGAATGGCCAGGAGAAATTGATGG
AACAATGGCTGACTGTTAGAACAGTGAGCTTCTCACCCTCGACGAGAAGG
ACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGC
ATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCT
CCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGC
TCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGT
CACATCCGGTATGCGCATCCGATAACTTTTTCGCCCGATGACGCCAAGTT
GCTAACTCGAACAACAGTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTA
CATGGTCCGCCTGGACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCC
CCTACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCT
GCTGCCGGTGGTGGTGACGACGAGGCTGAGGAGGATGAGGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000199:1340539..1341483-

>ATCC10864_008674-T1 ID=ATCC10864_008674-T1|Name=ATCC10864_008674-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3492bp|location=Sequence derived from alignment at MCQH01000199:1340539..1341483- (Aspergillus niger ATCC 10864)
TGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTCCGCCTGGACT
CCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCTACGGTGGTGGCCGC
CCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGA
CGACGAGGCTGAGGAGGATGAGGAGTAATGAGCTTCTCACCCTCGACGAG
AAGGACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTGGT
CCGCATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCTGG
CCCTCCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCTAC
AAGCTCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAGCA
GCGTCACATCCGTGACTCGGAACTGAAGATTGTCGGCGAGTACGGCCTGC
GCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACCCTGTCCAAGATTCGT
CGTGCTGCTCGCTTTCGAGTCGGCCCGTCTCCGCGTTTACTCCAAGACCT
ACAAGGTCCCCCGTCGTCATGGCCCCCGTCCCTGTCGGCAAGCAGATCGT
CAACGTCCCCTCCTACATGGTCCGCCTGGACTCCCAGAAGCACATCGACT
TCGCCCTCACCTCCCCCTACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGC
AAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGACGACGAGGCTGAGGAGGA
TGAGGAGTAATGAGCTTCTCACCCTCGACGAGAAGGACCCCAAGCGTCTT
TTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGCATCGGTGTCCTCGA
TGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCTCCGCGTTGAGGACT
TCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGCTCGGCCTTGCCAAG
TCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGTCACATCCGTGACTC
GGAACTGAAGATTGTCGGCGAGTACGGCCTGCGCAACAAGCGTGAGGTGT
GGCGTGTCCAGCTCACCCTGTCCAAGATTCGTCGTGCTGCTCGCTTTCGA
GTCGGCCCGTCTCCGCGTTTACTCCAAGACCTACAAGGTCCCCCGTCGTC
ATGGCCCCCGTCCCTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACAT
GGTCCGCCTGGACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCT
ACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCT
GCCGGTGGTGGTGACGACGAGGCTGAGGAGGATGAGGAGTAATGAGCTTC
TCACCCTCGACGAGAAGGACCCCAAGCGTCTTTTCGAAGGTAACGCTTTG
ATTCGCCGTCTGGTCCGCATCGGTGTCCTCGATGAGTCCCGCATGAAGCT
CGATTACGTCCTGGCCCTCCGCGTTGAGGACTTCTTGGAGCGTCGTCTTC
AGACTTGCGTCTACAAGCTCGGCCTTGCCAAGTCCATCCACCACGCCCGT
GTCCTGATCAAGCAGCGTCACATCCGTGACTCGGAACTGAAGATTGTCGG
CGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACCC
TGTCCAAGATTCGTCGTGCTGCTCGCTTTCGAGTCGGCCCGTCTCCGCGT
TTACTCCAAGACCTACAAGGTCCCCCGTCGTCATGGCCCCCGTCCCTGTC
GGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTCCGCCTGGACTCCCA
GAAGCACATCGACTTCGCCCTCACCTCCCCCTACGGTGGTGGCCGCCCTG
GCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGACGAC
GAGGCTGAGGAGGATGAGGAGTAATGAGCTTCTCACCCTCGACGAGAAGG
ACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGC
ATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCT
CCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGC
TCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGT
CACATCCGTGACTCGGAACTGAAGATTGTCGGCGAGTACGGCCTGCGCAA
CAAGCGTGAGGTGTGGCGTGTCCAGCTCACCCTGTCCAAGATTCGTCGTG
CTGCTCGCTTTCGAGTCGGCCCGTCTCCGCGTTTACTCCAAGACCTACAA
GGTCCCCCGTCGTCATGGCCCCCGTCCCTGTCGGCAAGCAGATCGTCAAC
GTCCCCTCCTACATGGTCCGCCTGGACTCCCAGAAGCACATCGACTTCGC
CCTCACCTCCCCCTACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGA
AGGCTGCCGCTGCTGCCGGTGGTGGTGACGACGAGGCTGAGGAGGATGAG
GAGTAATGAGCTTCTCACCCTCGACGAGAAGGACCCCAAGCGTCTTTTCG
AAGGTAACGCTTTGATTCGCCGTCTGGTCCGCATCGGTGTCCTCGATGAG
TCCCGCATGAAGCTCGATTACGTCCTGGCCCTCCGCGTTGAGGACTTCTT
GGAGCGTCGTCTTCAGACTTGCGTCTACAAGCTCGGCCTTGCCAAGTCCA
TCCACCACGCCCGTGTCCTGATCAAGCAGCGTCACATCCGTGACTCGGAA
CTGAAGATTGTCGGCGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCG
TGTCCAGCTCACCCTGTCCAAGATTCGTCGTGCTGCTCGCTTTCGAGTCG
GCCCGTCTCCGCGTTTACTCCAAGACCTACAAGGTCCCCCGTCGTCATGG
CCCCCGTCCCTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTC
CGCCTGGACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCTACGG
TGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCG
GTGGTGGTGACGACGAGGCTGAGGAGGATGAGGAGTAATGAGCTTCTCAC
CCTCGACGAGAAGGACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTC
GCCGTCTGGTCCGCATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGAT
TACGTCCTGGCCCTCCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGAC
TTGCGTCTACAAGCTCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCC
TGATCAAGCAGCGTCACATCCGTGACTCGGAACTGAAGATTGTCGGCGAG
TACGGCCTGCGCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACCCTGTC
CAAGATTCGTCGTGCTGCTCGCTTTCGAGTCGGCCCGTCTCCGCGTTTAC
TCCAAGACCTACAAGGTCCCCCGTCGTCATGGCCCCCGTCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS9ATCC10864_008674Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008674-T1ATCC10864_008674-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008674-T1.cdsATCC10864_008674-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008674-T1.exon6ATCC10864_008674-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_008674-T1.exon5ATCC10864_008674-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_008674-T1.exon4ATCC10864_008674-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008674-T1.exon3ATCC10864_008674-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008674-T1.exon2ATCC10864_008674-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008674-T1.exon1ATCC10864_008674-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001912
InterProIPR005710
InterProIPR002942
InterProIPR022801
InterProIPR036986
InterProIPR018079
PFAMPF01479
PFAMPF00163
Properties
Property NameValue
Product40S ribosomal protein S9
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1340539..1341483 -
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