You are here

Home

ATCC10864_008675-T1, ATCC10864_008675-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008675-T1
Unique NameATCC10864_008675-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1341755..1342496+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008675-T1 ID=ATCC10864_008675-T1|Name=ATCC10864_008675-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=742bp|location=Sequence derived from alignment at MCQH01000199:1341755..1342496+ (Aspergillus niger ATCC 10864)
ATGGGTCACTCGCACGGTTTGAGAGCCGGTACTCGGGTATGTCGATTTTA
CCCAGGAATTTTTGCAGCACCTTTTCGCTGGCTCGAGACGCGAGCGCTGA
CGAACTTTTCAGTATGCCTTCAGCCGTAACTTCAAGGAGAACGGCCAGAT
CCGCCTGTCGACCTACCTGAAGACCTACCGGTACGCCGAAAATTCTCGCC
GATTTGGATAATATTTGCGTCAAGGAGCAGGATCTGATATTTTTTTTTCC
ATAGGGTTGGCGACATTGTCGATATCAAGGTCAACGGTGCCGTTCAGAAG
GGGTCAGTACAAATTCCGCCCGGTGCAATAATGGGGATTCCGACATGAAG
GGTTTTGCGTGTTGGGATTCTCGAAATTTTGAGCGAAGAATTGGTTTGCT
GAGACATTTGGAAATAGTATGCCCTACAAGGTCTACAACGGTAAGACCGG
TGTCGTCTACAACGTGACCAAGTCCTCCGTCGGTGTCCTCCTCTACAAGG
TCGTCCGCAACCGCTACCTCGAGAAGCGCATCAACGTCCGCATCGAGCAC
GTCAAGCACTCCCGCTCCCGCGAGGACTTCATCAAGCGTGTCAAGGAGAA
CGCCCAGAAGAAGCGCCAGGCCAAGGAGCAGGGTGTCCACCTCCACCTGA
AGCGTCAGCCCGCCATGCCCCGTGAGGCTCACCTCGTCGAGGGTACCGCT
GCCGAGACCATCACCCCCATCCCCTACGACACCCACATCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:1341755..1342496+

>ATCC10864_008675-T1 ID=ATCC10864_008675-T1|Name=ATCC10864_008675-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1908bp|location=Sequence derived from alignment at MCQH01000199:1341755..1342496+ (Aspergillus niger ATCC 10864)
ATGGGTCACTCGCACGGTTTGAGAGCCGGTACTCGGTATGCCTTCAGCCG
TAACTTCAAGGAGAACGGCCAGATCCGCCTGTCGACCTACCTGAAGACCT
ACCGGGTTGGCGACATTGTCGATATCAAGGTCAACGGTGCCGTTCAGAAG
GGTATGCCCTACAAGGTCTACAACGGTAAGACCGGTGTCGTCTACAACGT
GACCAAGTCCTCCGTCGGTGTCCTCCTCTACAAGGTCGTCCGCAACCGCT
ACCTCGAGAAGCGCATCAACGTCCGCATCGAGCACGTCAAGCACTCCCGC
TCCCGCGAGGACTTCATCAAGCGTGTCAAGGAGAACGCCCAGAAGAAGCG
CCAGGCCAAGGAGCAGGGTGTCCACCTCCACCTGAAGCGTCAGCCCGCCA
TGCCCCGTGAGGCTCACCTCGTCGAGGGTACCGCTGCCGAGACCATCACC
CCCATCCCCTACGACACCCACATCTAAATGGGTCACTCGCACGGTTTGAG
AGCCGGTACTCGGTATGCCTTCAGCCGTAACTTCAAGGAGAACGGCCAGA
TCCGCCTGTCGACCTACCTGAAGACCTACCGGGTTGGCGACATTGTCGAT
ATCAAGGTCAACGGTGCCGTTCAGAAGGGTATGCCCTACAAGGTCTACAA
CGGTAAGACCGGTGTCGTCTACAACGTGACCAAGTCCTCCGTCGGTGTCC
TCCTCTACAAGGTCGTCCGCAACCGCTACCTCGAGAAGCGCATCAACGTC
CGCATCGAGCACGTCAAGCACTCCCGCTCCCGCGAGGACTTCATCAAGCG
TGTCAAGGAGAACGCCCAGAAGAAGCGCCAGGCCAAGGAGCAGGGTGTCC
ACCTCCACCTGAAGCGTCAGCCCGCCATGCCCCGTGAGGCTCACCTCGTC
GAGGGTACCGCTGCCGAGACCATCACCCCCATCCCCTACGACACCCACAT
CTAAATGGGTCACTCGCACGGTTTGAGAGCCGGTACTCGGTATGCCTTCA
GCCGTAACTTCAAGGAGAACGGCCAGATCCGCCTGTCGACCTACCTGAAG
ACCTACCGGGTTGGCGACATTGTCGATATCAAGGTCAACGGTGCCGTTCA
GAAGGGTATGCCCTACAAGGTCTACAACGGTAAGACCGGTGTCGTCTACA
ACGTGACCAAGTCCTCCGTCGGTGTCCTCCTCTACAAGGTCGTCCGCAAC
CGCTACCTCGAGAAGCGCATCAACGTCCGCATCGAGCACGTCAAGCACTC
CCGCTCCCGCGAGGACTTCATCAAGCGTGTCAAGGAGAACGCCCAGAAGA
AGCGCCAGGCCAAGGAGCAGGGTGTCCACCTCCACCTGAAGCGTCAGCCC
GCCATGCCCCGTGAGGCTCACCTCGTCGAGGGTACCGCTGCCGAGACCAT
CACCCCCATCCCCTACGACACCCACATCTAAATGGGTCACTCGCACGGTT
TGAGAGCCGGTACTCGGTATGCCTTCAGCCGTAACTTCAAGGAGAACGGC
CAGATCCGCCTGTCGACCTACCTGAAGACCTACCGGGTTGGCGACATTGT
CGATATCAAGGTCAACGGTGCCGTTCAGAAGGGTATGCCCTACAAGGTCT
ACAACGGTAAGACCGGTGTCGTCTACAACGTGACCAAGTCCTCCGTCGGT
GTCCTCCTCTACAAGGTCGTCCGCAACCGCTACCTCGAGAAGCGCATCAA
CGTCCGCATCGAGCACGTCAAGCACTCCCGCTCCCGCGAGGACTTCATCA
AGCGTGTCAAGGAGAACGCCCAGAAGAAGCGCCAGGCCAAGGAGCAGGGT
GTCCACCTCCACCTGAAGCGTCAGCCCGCCATGCCCCGTGAGGCTCACCT
CGTCGAGGGTACCGCTGCCGAGACCATCACCCCCATCCCCTACGACACCC
ACATCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008675ATCC10864_008675Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008675-T1.exon1ATCC10864_008675-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008675-T1.exon2ATCC10864_008675-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008675-T1.exon3ATCC10864_008675-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008675-T1.exon4ATCC10864_008675-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008675-T1.cdsATCC10864_008675-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008675-T1ATCC10864_008675-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018259
PFAMPF01157
InterProIPR001147
InterProIPR008991
InterProIPR036948
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1341755..1342496 +
Powered by Drupal