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ATCC10864_008680-T1, ATCC10864_008680-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008680-T1
Unique NameATCC10864_008680-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1357582..1358579+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008680-T1 ID=ATCC10864_008680-T1|Name=ATCC10864_008680-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=998bp|location=Sequence derived from alignment at MCQH01000199:1357582..1358579+ (Aspergillus niger ATCC 10864)
ATGGACTTGAAAAACCTCTCCAGCAATTGGAAGAAACTCCAGGGGACGCT
GAAAAAGGAAAGCGTCTCCGCCACGAAACGGAAACCTTCAGACCGCGAGA
CGGAGAATGGTGTGGTAAAGAAACGGAAAAGAGAAACTGTCGACGGACAA
CAAAAACCTGAGCGCAAACCGGTCTCAACCAAGAGAAAGAAGATGTCTAC
GAACGGTACTGATGGCGGCGAGAATGGCACCGAGGAGCCTACAAAGAAGT
CGACCTCTCGGAGGAATTCTACGGCCGCTGTTGCGGAATCAAAGCCGAAG
ATTAATGAAGGCCGTTCACCTACGTGAGCACACCTCTTGTTGCTGTTTTG
CGAGAGTTCTTTCTCTGTAATAACTACTAACGTTCTATTAGCGCGGAGCT
AGGAAAATATGTTGCGATGGATTGCGAAATGGTGGGCGTTGGCCCCAATC
CAGACCACGACTCCGCTCTCGCGCGAGTCAGTATTGTCAACTTCAACGGC
GAACAAATATACGACTCTTACGTGAGACCCAAGGAAATGGTTACAGACTG
GCGGACGCATGTCAGCGGCATCCTTCCGAAGCATATGGTGGAGGCACGAA
CACTCGAGCAGGTGCAGAAAGACGTTATCAATATCCTCGATGGGCGAATA
CTCGTGGGACATGCGGTCAGCAACGACTTGGACGCTCTTCTTCTCAGCCA
CCCTAAGCGCGACATCAGAGACACCAGCAAACATCCCCCGTACAGAAAGA
TTGCTGGCGGCGGCTCCCCTAGGCTGAAGATGTTGGCTTCGGAGTTTCTT
GGGCTAGAAATCCAGGATGGCGCTCATTCTAGTGTGGAGGATGCTAGGGC
TACAATGCTTCTGTACCGGCGGGATAAGGACACATTCGAGCGGGAACATC
TCAAGAAGTGGCCTGTGCGAGTAGTTGTCGAAAAGAAAGACCAAGACGAT
GATCAAAAGAAAAAGAAGAAGAAGAAGAAGAAGACCCGTAAGAGGTGA
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Coding sequence (CDS) from alignment at MCQH01000199:1357582..1358579+

>ATCC10864_008680-T1 ID=ATCC10864_008680-T1|Name=ATCC10864_008680-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1860bp|location=Sequence derived from alignment at MCQH01000199:1357582..1358579+ (Aspergillus niger ATCC 10864)
ATGGACTTGAAAAACCTCTCCAGCAATTGGAAGAAACTCCAGGGGACGCT
GAAAAAGGAAAGCGTCTCCGCCACGAAACGGAAACCTTCAGACCGCGAGA
CGGAGAATGGTGTGGTAAAGAAACGGAAAAGAGAAACTGTCGACGGACAA
CAAAAACCTGAGCGCAAACCGGTCTCAACCAAGAGAAAGAAGATGTCTAC
GAACGGTACTGATGGCGGCGAGAATGGCACCGAGGAGCCTACAAAGAAGT
CGACCTCTCGGAGGAATTCTACGGCCGCTGTTGCGGAATCAAAGCCGAAG
ATTAATGAAGGCCGTTCACCTACCGCGGAGCTAGGAAAATATGTTGCGAT
GGATTGCGAAATGGTGGGCGTTGGCCCCAATCCAGACCACGACTCCGCTC
TCGCGCGAGTCAGTATTGTCAACTTCAACGGCGAACAAATATACGACTCT
TACGTGAGACCCAAGGAAATGGTTACAGACTGGCGGACGCATGTCAGCGG
CATCCTTCCGAAGCATATGGTGGAGGCACGAACACTCGAGCAGGTGCAGA
AAGACGTTATCAATATCCTCGATGGGCGAATACTCGTGGGACATGCGGTC
AGCAACGACTTGGACGCTCTTCTTCTCAGCCACCCTAAGCGCGACATCAG
AGACACCAGCAAACATCCCCCGTACAGAAAGATTGCTGGCGGCGGCTCCC
CTAGGCTGAAGATGTTGGCTTCGGAGTTTCTTGGGCTAGAAATCCAGGAT
GGCGCTCATTCTAGTGTGGAGGATGCTAGGGCTACAATGCTTCTGTACCG
GCGGGATAAGGACACATTCGAGCGGGAACATCTCAAGAAGTGGCCTGTGC
GAGTAGTTGTCGAAAAGAAAGACCAAGACGATGATCAAAAGAAAAAGAAG
AAGAAGAAGAAGAAGACCCGTAAGAGGTGAATGGACTTGAAAAACCTCTC
CAGCAATTGGAAGAAACTCCAGGGGACGCTGAAAAAGGAAAGCGTCTCCG
CCACGAAACGGAAACCTTCAGACCGCGAGACGGAGAATGGTGTGGTAAAG
AAACGGAAAAGAGAAACTGTCGACGGACAACAAAAACCTGAGCGCAAACC
GGTCTCAACCAAGAGAAAGAAGATGTCTACGAACGGTACTGATGGCGGCG
AGAATGGCACCGAGGAGCCTACAAAGAAGTCGACCTCTCGGAGGAATTCT
ACGGCCGCTGTTGCGGAATCAAAGCCGAAGATTAATGAAGGCCGTTCACC
TACCGCGGAGCTAGGAAAATATGTTGCGATGGATTGCGAAATGGTGGGCG
TTGGCCCCAATCCAGACCACGACTCCGCTCTCGCGCGAGTCAGTATTGTC
AACTTCAACGGCGAACAAATATACGACTCTTACGTGAGACCCAAGGAAAT
GGTTACAGACTGGCGGACGCATGTCAGCGGCATCCTTCCGAAGCATATGG
TGGAGGCACGAACACTCGAGCAGGTGCAGAAAGACGTTATCAATATCCTC
GATGGGCGAATACTCGTGGGACATGCGGTCAGCAACGACTTGGACGCTCT
TCTTCTCAGCCACCCTAAGCGCGACATCAGAGACACCAGCAAACATCCCC
CGTACAGAAAGATTGCTGGCGGCGGCTCCCCTAGGCTGAAGATGTTGGCT
TCGGAGTTTCTTGGGCTAGAAATCCAGGATGGCGCTCATTCTAGTGTGGA
GGATGCTAGGGCTACAATGCTTCTGTACCGGCGGGATAAGGACACATTCG
AGCGGGAACATCTCAAGAAGTGGCCTGTGCGAGTAGTTGTCGAAAAGAAA
GACCAAGACGATGATCAAAAGAAAAAGAAGAAGAAGAAGAAGAAGACCCG
TAAGAGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:00084083'-5' exonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
REX4ATCC10864_008680Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008680-T1.exon1ATCC10864_008680-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008680-T1.exon2ATCC10864_008680-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008680-T1.cdsATCC10864_008680-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008680-T1ATCC10864_008680-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012337
PFAMPF00929
InterProIPR013520
InterProIPR037431
InterProIPR036397
Properties
Property NameValue
NoteBUSCO:EOG092646PE
Product3'-5' exonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1357582..1358579 +
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