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ATCC10864_008681-T1, ATCC10864_008681-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008681-T1
Unique NameATCC10864_008681-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1358966..1359602+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008681-T1 ID=ATCC10864_008681-T1|Name=ATCC10864_008681-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=637bp|location=Sequence derived from alignment at MCQH01000199:1358966..1359602+ (Aspergillus niger ATCC 10864)
ATGTTCGCCATCCAACCAGCCCAGAACTCGTCCAACGAGACACCAACCGA
TAAATTCACTCCGAACATCCTGCCCTGTCGCATCCACCACGATGGCCCCG
TTGAAACTCTAGGCCGCTACTGGAATCCCACCTCTGATGAGAAAGGTATA
CACTGACTGCTTCGCATCCGGCAATTCGCTACCCACGCTCATTTTTCACA
GATCAGAACCTGCAAACAGCCTACTTCCGCGGCCGCAAGCTAAGGGGCCG
CCGAGTCGCGATTCCCGAAGGCTACGAGGGTGAGACTTGCCCGGCCACAT
CAATCCTTGAATGGTTCGCTAACAAATCGATTTAGGTGTCATTGCAATCC
CCACAGACCGTACGATGCCTACTACCCGTACAAGCGCCGACGTTGAGGTC
GAGGAAATCACACCAGAAGAACCTGTGAAGGTCCTTGAGAAGCAAGGCAC
ATTTGATGAATATGTTGTCTGGGGACATGAGTTTGTGCCTGCGGCAGATG
AGACCTTCGTTAAGGGAGTGGAGGAGTGGATCAAGCTTGCTGAAGTGGTA
GGTCGATCATTTTCCATAGGTCGTCCTCAGGCTAATGCAGTGTAGATGCA
TACGACTCCTGACAGTGAAAAGCAGCCGTCTACTTGA
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Coding sequence (CDS) from alignment at MCQH01000199:1358966..1359602+

>ATCC10864_008681-T1 ID=ATCC10864_008681-T1|Name=ATCC10864_008681-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1908bp|location=Sequence derived from alignment at MCQH01000199:1358966..1359602+ (Aspergillus niger ATCC 10864)
ATGTTCGCCATCCAACCAGCCCAGAACTCGTCCAACGAGACACCAACCGA
TAAATTCACTCCGAACATCCTGCCCTGTCGCATCCACCACGATGGCCCCG
TTGAAACTCTAGGCCGCTACTGGAATCCCACCTCTGATGAGAAAGATCAG
AACCTGCAAACAGCCTACTTCCGCGGCCGCAAGCTAAGGGGCCGCCGAGT
CGCGATTCCCGAAGGCTACGAGGGTGTCATTGCAATCCCCACAGACCGTA
CGATGCCTACTACCCGTACAAGCGCCGACGTTGAGGTCGAGGAAATCACA
CCAGAAGAACCTGTGAAGGTCCTTGAGAAGCAAGGCACATTTGATGAATA
TGTTGTCTGGGGACATGAGTTTGTGCCTGCGGCAGATGAGACCTTCGTTA
AGGGAGTGGAGGAGTGGATCAAGCTTGCTGAAGTGATGCATACGACTCCT
GACAGTGAAAAGCAGCCGTCTACTTGAATGTTCGCCATCCAACCAGCCCA
GAACTCGTCCAACGAGACACCAACCGATAAATTCACTCCGAACATCCTGC
CCTGTCGCATCCACCACGATGGCCCCGTTGAAACTCTAGGCCGCTACTGG
AATCCCACCTCTGATGAGAAAGATCAGAACCTGCAAACAGCCTACTTCCG
CGGCCGCAAGCTAAGGGGCCGCCGAGTCGCGATTCCCGAAGGCTACGAGG
GTGTCATTGCAATCCCCACAGACCGTACGATGCCTACTACCCGTACAAGC
GCCGACGTTGAGGTCGAGGAAATCACACCAGAAGAACCTGTGAAGGTCCT
TGAGAAGCAAGGCACATTTGATGAATATGTTGTCTGGGGACATGAGTTTG
TGCCTGCGGCAGATGAGACCTTCGTTAAGGGAGTGGAGGAGTGGATCAAG
CTTGCTGAAGTGATGCATACGACTCCTGACAGTGAAAAGCAGCCGTCTAC
TTGAATGTTCGCCATCCAACCAGCCCAGAACTCGTCCAACGAGACACCAA
CCGATAAATTCACTCCGAACATCCTGCCCTGTCGCATCCACCACGATGGC
CCCGTTGAAACTCTAGGCCGCTACTGGAATCCCACCTCTGATGAGAAAGA
TCAGAACCTGCAAACAGCCTACTTCCGCGGCCGCAAGCTAAGGGGCCGCC
GAGTCGCGATTCCCGAAGGCTACGAGGGTGTCATTGCAATCCCCACAGAC
CGTACGATGCCTACTACCCGTACAAGCGCCGACGTTGAGGTCGAGGAAAT
CACACCAGAAGAACCTGTGAAGGTCCTTGAGAAGCAAGGCACATTTGATG
AATATGTTGTCTGGGGACATGAGTTTGTGCCTGCGGCAGATGAGACCTTC
GTTAAGGGAGTGGAGGAGTGGATCAAGCTTGCTGAAGTGATGCATACGAC
TCCTGACAGTGAAAAGCAGCCGTCTACTTGAATGTTCGCCATCCAACCAG
CCCAGAACTCGTCCAACGAGACACCAACCGATAAATTCACTCCGAACATC
CTGCCCTGTCGCATCCACCACGATGGCCCCGTTGAAACTCTAGGCCGCTA
CTGGAATCCCACCTCTGATGAGAAAGATCAGAACCTGCAAACAGCCTACT
TCCGCGGCCGCAAGCTAAGGGGCCGCCGAGTCGCGATTCCCGAAGGCTAC
GAGGGTGTCATTGCAATCCCCACAGACCGTACGATGCCTACTACCCGTAC
AAGCGCCGACGTTGAGGTCGAGGAAATCACACCAGAAGAACCTGTGAAGG
TCCTTGAGAAGCAAGGCACATTTGATGAATATGTTGTCTGGGGACATGAG
TTTGTGCCTGCGGCAGATGAGACCTTCGTTAAGGGAGTGGAGGAGTGGAT
CAAGCTTGCTGAAGTGATGCATACGACTCCTGACAGTGAAAAGCAGCCGT
CTACTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032299ribonuclease H2 complex
Vocabulary: Biological Process
TermDefinition
GO:0006401RNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008681ATCC10864_008681Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008681-T1.exon1ATCC10864_008681-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008681-T1.exon2ATCC10864_008681-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008681-T1.exon3ATCC10864_008681-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008681-T1.exon4ATCC10864_008681-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008681-T1.cdsATCC10864_008681-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008681-T1ATCC10864_008681-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08615
InterProIPR013924
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1358966..1359602 +
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