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ATCC10864_008711-T1, ATCC10864_008711-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008711-T1
Unique NameATCC10864_008711-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1440661..1442165-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008711-T1 ID=ATCC10864_008711-T1|Name=ATCC10864_008711-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1505bp|location=Sequence derived from alignment at MCQH01000199:1440661..1442165- (Aspergillus niger ATCC 10864)
ATGTCTGCTGTACGTCCCGTGAGAAAAGGTCTTCACCTTTTGGGCTCGAG
CTCGCTCGCCCGCCCCGCCTCTGTCGCTGTCAATGGCGCATCTCTGCTCC
CGCGGCAGCTGGCAGCTTCTCCGCGCGCTCTCCGCCCCGCGGCCAGCTCC
ATTCCTGCTGCTCGTCCACTTCCCCGGGTGACTTCGCTGTCTGCTCAAGG
AGGTGTCCGATATGCCTCGTCTGTAGCTCCTTCAGGTCCAGTGAAGAAGA
CTCAGCTGTATGACCTTCACTTGGCCCGGGGTGCCAAAATGGTCCCCTTT
GCGGGGTTCTCCATGCCCCTGCAGTATTCCGACCTCAGTCATGTTGAGAG
CCACAAGTGGACTCGGGAAAAGGCCAGTCTTTTCGACGTGAGCCATATGT
GCGTATACCTCTCTTCGTGAAGTGCCCAGAGTCTCGTTAATTGACCATCT
ACAGGGTTCAACATCAGCTCAGCGGTCCCGGCGCTCTCGACCTCCTCATG
AAGGTCACCCCCTCATCCCTCGACAAGCTCAAGCATAACCAATCCACTCT
CTCTTGTCTCCTGGAGGATGGAACTGGCGGCATTATCGATGACACCGTCA
TCACTCGTCGTACCGATGACACCTTCTACTTCGTGACCAACGCCGGTCGT
CGCACCGAGGACCTGGCCTTCCTGCAAGCCGAAATCGACACCTACAAGCA
AGCCCACGGGCCCGACAGCCTGAAGTGGGAGATCCTCGAGGACCGCGCCC
TAGTCGCTCTCCAAGGTCCTAAGGCTGCCTCCGTCCTCCAATCCCTCGTC
ACCCCCGACGGTGCCAACTCAGATCTCTCCACCCTCTACTTCGGTAACTG
CCGAGAGCTGCACCTCACCTTCCCCGACGGCACCACCACCCCGCAGCCCC
TTCTCGTCTCCCGAACCGGCTACACCGGCGAAGATGGCTTTGAGATCTCC
ATCCCCACTGCCAGCGACGCCACCCTACCTGTCCGCGTTACCGAGCTCTT
CCTCTCCAACCCCGACGAAGTCCGTTTCGCCGGTCTCGCCGCGCGCGACT
CCCTCCGTCTCGAAGCCGGAATGTGTCTCTATGGAAGCGACATTTCCACC
TCTCAAACTCCTCCCGGCGCCTCCCTGACCTGGCTCGTAGGCAAGGAGCG
TCGTGACCCTGCCACCGCCAACTTCAACGGCGCCTCCACCATCCTCCCCC
AGGTTGCCTCCCCCAAGACCCTCTCCCAGCGCCGTGTCGGATTCACCGTT
GAGAAGGGCTCCCCTGCCCGTGAGGGCGCCATCATTGTCGATCTGAACGA
TGAGTCCCGCACCCAGATCGGTGTCATTACCTCTGGCCTTCCTAGCCCTA
CCCTGGGCGGCACTAACATTGCCATGGGCTACATCAAGAACGGCCTGCAT
AAGAAGGGCACCGAGGTTGGCGTCTTGGTGAGGAACAAGCTCCGCAAGGC
TACGGTTACGGGTATGCCTTGGGTTGAGAGCAAGTTCTATCGTCCCAAGG
CTTAG
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Coding sequence (CDS) from alignment at MCQH01000199:1440661..1442165-

>ATCC10864_008711-T1 ID=ATCC10864_008711-T1|Name=ATCC10864_008711-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2898bp|location=Sequence derived from alignment at MCQH01000199:1440661..1442165- (Aspergillus niger ATCC 10864)
GGTTCAACATCAGCTCAGCGGTCCCGGCGCTCTCGACCTCCTCATGAAGG
TCACCCCCTCATCCCTCGACAAGCTCAAGCATAACCAATCCACTCTCTCT
TGTCTCCTGGAGGATGGAACTGGCGGCATTATCGATGACACCGTCATCAC
TCGTCGTACCGATGACACCTTCTACTTCGTGACCAACGCCGGTCGTCGCA
CCGAGGACCTGGCCTTCCTGCAAGCCGAAATCGACACCTACAAGCAAGCC
CACGGGCCCGACAGCCTGAAGTGGGAGATCCTCGAGGACCGCGCCCTAGT
CGCTCTCCAAGGTCCTAAGGCTGCCTCCGTCCTCCAATCCCTCGTCACCC
CCGACGGTGCCAACTCAGATCTCTCCACCCTCTACTTCGGTAACTGCCGA
GAGCTGCACCTCACCTTCCCCGACGGCACCACCACCCCGCAGCCCCTTCT
CGTCTCCCGAACCGGCTACACCGGCGAAGATGGCTTTGAGATCTCCATCC
CCACTGCCAGCGACGCCACCCTACCTGTCCGCGTTACCGAGCTCTTCCTC
TCCAACCCCGACGAAGTCCGTTTCGCCGGTCTCGCCGCGCGCGACTCCCT
CCGTCTCGAAGCCGGAATGTGTCTCTATGGAAGCGACATTTCCACCTCTC
AAACTCCTCCCGGCGCCTCCCTGACCTGGCTCGTAGGCAAGGAGCGTCGT
GACCCTGCCACCGCCAACTTCAACGGCGCCTCCACCATCCTCCCCCAGGT
TGCCTCCCCCAAGACCCTCTCCCAGCGCCGTGTCGGATTCACCGTTGAGA
AGGGCTCCCCTGCCCGTGAGGGCGCCATCATTGTCGATCTGAACGATGAG
TCCCGCACCCAGATCGGTGTCATTACCTCTGGCCTTCCTAGCCCTACCCT
GGGCGGCACTAACATTGCCATGGGCTACATCAAGAACGGCCTGCATAAGA
AGGGCACCGAGGTTGGCGTCTTGGTGAGGAACAAGCTCCGCAAGGCTACG
GTTACGGGTATGCCTTGGGTTGAGAGCAAGTTCTATCGTCCCAAGGCTTA
GATGTCTGCTGTACGTCCCGTGAGAAAAGGTCTTCACCTTTTGGGCTCGA
GCTCGCTCGCCCGCCCCGCCTCTGTCGCTGTCAATGGCGCATCTCTGCTC
CCGCGGCAGCTGGCAGCTTCTCCGCGCGCTCTCCGCCCCGCGGCCAGCTC
CATTCCTGCTGCTCGTCCACTTCCCCGGGTGACTTCGCTGTCTGCTCAAG
GAGGTGTCCGATATGCCTCGTCTGTAGCTCCTTCAGGTCCAGTGAAGAAG
ACTCAGCTGTATGACCTTCACTTGGCCCGGGGTGCCAAAATGGTCCCCTT
TGCGGGGTTCTCCATGCCCCTGCAGTATTCCGACCTCAGTCATGTTGAGA
GCCACAAGTGGACTCGGGAAAAGGCCAGTCTTTTCGACGTGAGCCATATG
GTTCAACATCAGCTCAGCGGTCCCGGCGCTCTCGACCTCCTCATGAAGGT
CACCCCCTCATCCCTCGACAAGCTCAAGCATAACCAATCCACTCTCTCTT
GTCTCCTGGAGGATGGAACTGGCGGCATTATCGATGACACCGTCATCACT
CGTCGTACCGATGACACCTTCTACTTCGTGACCAACGCCGGTCGTCGCAC
CGAGGACCTGGCCTTCCTGCAAGCCGAAATCGACACCTACAAGCAAGCCC
ACGGGCCCGACAGCCTGAAGTGGGAGATCCTCGAGGACCGCGCCCTAGTC
GCTCTCCAAGGTCCTAAGGCTGCCTCCGTCCTCCAATCCCTCGTCACCCC
CGACGGTGCCAACTCAGATCTCTCCACCCTCTACTTCGGTAACTGCCGAG
AGCTGCACCTCACCTTCCCCGACGGCACCACCACCCCGCAGCCCCTTCTC
GTCTCCCGAACCGGCTACACCGGCGAAGATGGCTTTGAGATCTCCATCCC
CACTGCCAGCGACGCCACCCTACCTGTCCGCGTTACCGAGCTCTTCCTCT
CCAACCCCGACGAAGTCCGTTTCGCCGGTCTCGCCGCGCGCGACTCCCTC
CGTCTCGAAGCCGGAATGTGTCTCTATGGAAGCGACATTTCCACCTCTCA
AACTCCTCCCGGCGCCTCCCTGACCTGGCTCGTAGGCAAGGAGCGTCGTG
ACCCTGCCACCGCCAACTTCAACGGCGCCTCCACCATCCTCCCCCAGGTT
GCCTCCCCCAAGACCCTCTCCCAGCGCCGTGTCGGATTCACCGTTGAGAA
GGGCTCCCCTGCCCGTGAGGGCGCCATCATTGTCGATCTGAACGATGAGT
CCCGCACCCAGATCGGTGTCATTACCTCTGGCCTTCCTAGCCCTACCCTG
GGCGGCACTAACATTGCCATGGGCTACATCAAGAACGGCCTGCATAAGAA
GGGCACCGAGGTTGGCGTCTTGGTGAGGAACAAGCTCCGCAAGGCTACGG
TTACGGGTATGCCTTGGGTTGAGAGCAAGTTCTATCGTCCCAAGGCTTAG
ATGTCTGCTGTACGTCCCGTGAGAAAAGGTCTTCACCTTTTGGGCTCGAG
CTCGCTCGCCCGCCCCGCCTCTGTCGCTGTCAATGGCGCATCTCTGCTCC
CGCGGCAGCTGGCAGCTTCTCCGCGCGCTCTCCGCCCCGCGGCCAGCTCC
ATTCCTGCTGCTCGTCCACTTCCCCGGGTGACTTCGCTGTCTGCTCAAGG
AGGTGTCCGATATGCCTCGTCTGTAGCTCCTTCAGGTCCAGTGAAGAAGA
CTCAGCTGTATGACCTTCACTTGGCCCGGGGTGCCAAAATGGTCCCCTTT
GCGGGGTTCTCCATGCCCCTGCAGTATTCCGACCTCAGTCATGTTGAGAG
CCACAAGTGGACTCGGGAAAAGGCCAGTCTTTTCGACGTGAGCCATAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006546glycine catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004047aminomethyltransferase activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008711ATCC10864_008711Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008711-T1ATCC10864_008711-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008711-T1.cdsATCC10864_008711-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008711-T1.exon2ATCC10864_008711-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008711-T1.exon1ATCC10864_008711-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR028896
InterProIPR006222
InterProIPR029043
InterProIPR006223
InterProIPR013977
InterProIPR027266
PFAMPF01571
PFAMPF08669
Properties
Property NameValue
NoteBUSCO:EOG09263J6Z
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1440661..1442165 -
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