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ATCC10864_008746-T1, ATCC10864_008746-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008746-T1
Unique NameATCC10864_008746-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1571497..1572134+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008746-T1 ID=ATCC10864_008746-T1|Name=ATCC10864_008746-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=638bp|location=Sequence derived from alignment at MCQH01000199:1571497..1572134+ (Aspergillus niger ATCC 10864)
ATGGAGAACGAGAAGGGAGAGATCGTCGATCTGTATGTATCCATTCCTTC
CAAAACCAAATAATGTTGAGTTTGTGTGTGGTGCGAGATGGAGATATGGA
TGCGATTCGGTGCTCGATATACGATGATATGATATGGCTTGGAGAGATAT
ATCGCGGATATGTGCTACGGCGGGGAACATTATTGTCGAATCGACGAGGA
CATGGTTTTTAAATCAGGATCTACGATATGGAAGAGACGGAATTGAAGAA
ATATACGGAGAAAGGACAGGAGAAGGAAAGAGGAGGAATACCGAACACCG
ATCGCATCGCATATCTCTATCATCATCATCATCCAACGTCTCAATACATG
CGCAATCGCCAAAAGGACAAGCCAAGGCAAAATGCTAATATTAAATTTAA
CAGCTACGTCCCCCGCAAGTGCAGCGCCACCAACCGCATCATCAAGGCCA
ACGACCACGCCTCCGTCCAGATCTCCATCGCCAAGGTTGACGAGAACGGC
CGCTACACCGGTGAGAACCACACCTACGCTCTGTGCGGCTTCATCCGTGC
CCGTGGTGAGAGCGATGACTCCCTGAACCGCCTTGCCCAGCGTGACGGCT
ACGTCCGCAACGTCTGGACCGCTGCCCGCCAGCGCTAA
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Coding sequence (CDS) from alignment at MCQH01000199:1571497..1572134+

>ATCC10864_008746-T1 ID=ATCC10864_008746-T1|Name=ATCC10864_008746-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=534bp|location=Sequence derived from alignment at MCQH01000199:1571497..1572134+ (Aspergillus niger ATCC 10864)
ATGGAGAACGAGAAGGGAGAGATCGTCGATCTCTACGTCCCCCGCAAGTG
CAGCGCCACCAACCGCATCATCAAGGCCAACGACCACGCCTCCGTCCAGA
TCTCCATCGCCAAGGTTGACGAGAACGGCCGCTACACCGGTGAGAACCAC
ACCTACGCTCTGTGCGGCTTCATCCGTGCCCGTGGTGAGAGCGATGACTC
CCTGAACCGCCTTGCCCAGCGTGACGGCTACGTCCGCAACGTCTGGACCG
CTGCCCGCCAGCGCTAAATGGAGAACGAGAAGGGAGAGATCGTCGATCTC
TACGTCCCCCGCAAGTGCAGCGCCACCAACCGCATCATCAAGGCCAACGA
CCACGCCTCCGTCCAGATCTCCATCGCCAAGGTTGACGAGAACGGCCGCT
ACACCGGTGAGAACCACACCTACGCTCTGTGCGGCTTCATCCGTGCCCGT
GGTGAGAGCGATGACTCCCTGAACCGCCTTGCCCAGCGTGACGGCTACGT
CCGCAACGTCTGGACCGCTGCCCGCCAGCGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS21ATCC10864_008746Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008746-T1.exon1ATCC10864_008746-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008746-T1.exon2ATCC10864_008746-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008746-T1.cdsATCC10864_008746-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008746-T1ATCC10864_008746-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01249
InterProIPR018279
InterProIPR038579
InterProIPR001931
Properties
Property NameValue
Product40S ribosomal protein S21
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1571497..1572134 +
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