You are here

Home

ATCC10864_008788-T1, ATCC10864_008788-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008788-T1
Unique NameATCC10864_008788-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1708837..1709514-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008788-T1 ID=ATCC10864_008788-T1|Name=ATCC10864_008788-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=678bp|location=Sequence derived from alignment at MCQH01000199:1708837..1709514- (Aspergillus niger ATCC 10864)
ATGAGGACGTCGACCTTGGTGGCCGCTACTGCCGGCACAATCGTCACCGG
CCTTTTGGGTAAGGACACCAGCCCGGCCATCCACGGAACCATCATATACC
GAGGTTGTCCAAACTTAGATGCTGATCGCCTTCATTGCCCTTTCTAGCCT
ACGCCGTCTACTTTGACCACAAGAGACAGACCGATCCGGAGTTCCGCAAA
GCTCTCAAGAGGAACAACCGCCGCATGGCAAGGGCTGTCAAGGAGGAGGC
TGAGGCCCAGGGTGCCATGCAGCGCGAGGTCATCAAGAAGGTCGTGCAGC
AGGCCAAGGACGAGGGTTTCCCTACGGACCTGGAGGAGAAGGAGGCCTAC
TTCATGAGCCAGGTCGCTCAGGGAGAGTCTCTTGTTGCTGAAGGTATGCA
TCTCCCGGCCTGACGCGCTTTGATCACGTCCCCTACCCTATCTATGCATT
GGCAATCCATGTACCAACCGCACTACAGAACCCATTGAGGCTGCCTTGTG
CTTCTACAAGGCCTTGAAGGTCTACCCCCAGCCCAAGGACCTGATCTCCA
TCTACGACAAGACCGTGCCCAAGGAAGTGCTGGAGATCCTGGCCGAGATG
GTCGCTCTGGACTCCGGCTTGAAGCTGGGCTCGTTCACTGGCGAGAGCGC
CGCTCCGGAGAGCCACGGAGTCGAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:1708837..1709514-

>ATCC10864_008788-T1 ID=ATCC10864_008788-T1|Name=ATCC10864_008788-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1512bp|location=Sequence derived from alignment at MCQH01000199:1708837..1709514- (Aspergillus niger ATCC 10864)
AACCCATTGAGGCTGCCTTGTGCTTCTACAAGGCCTTGAAGGTCTACCCC
CAGCCCAAGGACCTGATCTCCATCTACGACAAGACCGTGCCCAAGGAAGT
GCTGGAGATCCTGGCCGAGATGGTCGCTCTGGACTCCGGCTTGAAGCTGG
GCTCGTTCACTGGCGAGAGCGCCGCTCCGGAGAGCCACGGAGTCGAGTAA
CCTACGCCGTCTACTTTGACCACAAGAGACAGACCGATCCGGAGTTCCGC
AAAGCTCTCAAGAGGAACAACCGCCGCATGGCAAGGGCTGTCAAGGAGGA
GGCTGAGGCCCAGGGTGCCATGCAGCGCGAGGTCATCAAGAAGGTCGTGC
AGCAGGCCAAGGACGAGGGTTTCCCTACGGACCTGGAGGAGAAGGAGGCC
TACTTCATGAGCCAGGTCGCTCAGGGAGAGTCTCTTGTTGCTGAAGATGA
GGACGTCGACCTTGGTGGCCGCTACTGCCGGCACAATCGTCACCGGCCTT
TTGGAACCCATTGAGGCTGCCTTGTGCTTCTACAAGGCCTTGAAGGTCTA
CCCCCAGCCCAAGGACCTGATCTCCATCTACGACAAGACCGTGCCCAAGG
AAGTGCTGGAGATCCTGGCCGAGATGGTCGCTCTGGACTCCGGCTTGAAG
CTGGGCTCGTTCACTGGCGAGAGCGCCGCTCCGGAGAGCCACGGAGTCGA
GTAACCTACGCCGTCTACTTTGACCACAAGAGACAGACCGATCCGGAGTT
CCGCAAAGCTCTCAAGAGGAACAACCGCCGCATGGCAAGGGCTGTCAAGG
AGGAGGCTGAGGCCCAGGGTGCCATGCAGCGCGAGGTCATCAAGAAGGTC
GTGCAGCAGGCCAAGGACGAGGGTTTCCCTACGGACCTGGAGGAGAAGGA
GGCCTACTTCATGAGCCAGGTCGCTCAGGGAGAGTCTCTTGTTGCTGAAG
ATGAGGACGTCGACCTTGGTGGCCGCTACTGCCGGCACAATCGTCACCGG
CCTTTTGGAACCCATTGAGGCTGCCTTGTGCTTCTACAAGGCCTTGAAGG
TCTACCCCCAGCCCAAGGACCTGATCTCCATCTACGACAAGACCGTGCCC
AAGGAAGTGCTGGAGATCCTGGCCGAGATGGTCGCTCTGGACTCCGGCTT
GAAGCTGGGCTCGTTCACTGGCGAGAGCGCCGCTCCGGAGAGCCACGGAG
TCGAGTAACCTACGCCGTCTACTTTGACCACAAGAGACAGACCGATCCGG
AGTTCCGCAAAGCTCTCAAGAGGAACAACCGCCGCATGGCAAGGGCTGTC
AAGGAGGAGGCTGAGGCCCAGGGTGCCATGCAGCGCGAGGTCATCAAGAA
GGTCGTGCAGCAGGCCAAGGACGAGGGTTTCCCTACGGACCTGGAGGAGA
AGGAGGCCTACTTCATGAGCCAGGTCGCTCAGGGAGAGTCTCTTGTTGCT
GAAGATGAGGACGTCGACCTTGGTGGCCGCTACTGCCGGCACAATCGTCA
CCGGCCTTTTGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005742mitochondrial outer membrane translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0006605protein targeting
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008788ATCC10864_008788Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008788-T1ATCC10864_008788-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008788-T1.cdsATCC10864_008788-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008788-T1.exon3ATCC10864_008788-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008788-T1.exon2ATCC10864_008788-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008788-T1.exon1ATCC10864_008788-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002056
PFAMPF02064
InterProIPR023392
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1708837..1709514 -
Powered by Drupal