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ATCC10864_008822-T1, ATCC10864_008822-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008822-T1
Unique NameATCC10864_008822-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1817583..1819991-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008822-T1 ID=ATCC10864_008822-T1|Name=ATCC10864_008822-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2409bp|location=Sequence derived from alignment at MCQH01000199:1817583..1819991- (Aspergillus niger ATCC 10864)
ATGGCTCCGATCAACGGTTCCCGCAATGGCAAACACTCAAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTTACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGACGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAT
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCTACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCGCAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGTTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTGATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATTACTACCAAGTTCTCCTCGGCCCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCTAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTTTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAAGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATACCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGTTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGACTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTGTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGGCTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGAGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACTCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Coding sequence (CDS) from alignment at MCQH01000199:1817583..1819991-

>ATCC10864_008822-T1 ID=ATCC10864_008822-T1|Name=ATCC10864_008822-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2409bp|location=Sequence derived from alignment at MCQH01000199:1817583..1819991- (Aspergillus niger ATCC 10864)
ATGGCTCCGATCAACGGTTCCCGCAATGGCAAACACTCAAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTTACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGACGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAT
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCTACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCGCAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGTTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTGATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATTACTACCAAGTTCTCCTCGGCCCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCTAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTTTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAAGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATACCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGTTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGACTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTGTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGGCTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGAGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACTCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0003724RNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP4ATCC10864_008822Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008822-T1.cdsATCC10864_008822-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008822-T1.exon1ATCC10864_008822-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008822-T1ATCC10864_008822-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00270
InterProIPR027417
InterProIPR000629
PFAMPF00271
InterProIPR014014
PFAMPF04851
PFAMPF13959
InterProIPR001650
InterProIPR025313
InterProIPR011545
InterProIPR014001
Properties
Property NameValue
NoteBUSCO:EOG09260YMF
ProductATP-dependent RNA helicase dbp4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1817583..1819991 -
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