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ATCC10864_008847-T1, ATCC10864_008847-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008847-T1
Unique NameATCC10864_008847-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000204:29209..29953+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008847-T1 ID=ATCC10864_008847-T1|Name=ATCC10864_008847-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=745bp|location=Sequence derived from alignment at MCQH01000204:29209..29953+ (Aspergillus niger ATCC 10864)
ATGGCTGGTACAAGGAACTACGACTTTCTGGTAAGTATTGACTAGACTCC
CAAGAAACCATAAGCTAAATGTCGGTCTTTGTAGATCAAGTTACTACTTA
TTGGGGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAA
GACTCGTTCACTCCGTCGTTCATTACTACCATCGGAATCGACTTCAAAAT
ACGTACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATA
CAGCTGGGCAAGAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGA
GCCATGGGCATTCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCA
AAGTGAGAAACGCCTTCCTTAAACCCGAGGTGGGTCATAAGATAATTTGA
TGCTAATGCCCAATCACCTTAGACATTCGCACCTGGTTCTCAAATGTCGA
ACAACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTG
ATTGGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCT
AATGAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAA
CATCGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGG
ATACGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAG
CAAGGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGA
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Coding sequence (CDS) from alignment at MCQH01000204:29209..29953+

>ATCC10864_008847-T1 ID=ATCC10864_008847-T1|Name=ATCC10864_008847-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1863bp|location=Sequence derived from alignment at MCQH01000204:29209..29953+ (Aspergillus niger ATCC 10864)
ATGGCTGGTACAAGGAACTACGACTTTCTGATCAAGTTACTACTTATTGG
GGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACT
CGTTCACTCCGTCGTTCATTACTACCATCGGAATCGACTTCAAAATACGT
ACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGC
TGGGCAAGAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCA
TGGGCATTCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAAC
ATTCGCACCTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCA
CAAGATCCTTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGT
CAACCGAGCAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTT
GAAGTATCGGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCT
CGCATCCGACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCG
GCTCTCAGGGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGC
GCAGGTGGGAAGTGCTGTTGAATGGCTGGTACAAGGAACTACGACTTTCT
GATCAAGTTACTACTTATTGGGGACTCTGGGGTGGGAAAGTCATGCTGTC
TATTGCGATTCAGTGAAGACTCGTTCACTCCGTCGTTCATTACTACCATC
GGAATCGACTTCAAAATACGTACCATCGAATTGGACGGTAAAAGAGTAAA
GCTCCAGATATGGGATACAGCTGGGCAAGAGCGATTTAGAACTATCACTA
CTGCTTACTACAGAGGAGCCATGGGCATTCTTCTTGTATACGATGTCACT
GATGAAAGATCATTCCAAAACATTCGCACCTGGTTCTCAAATGTCGAACA
ACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTGATT
GGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCTAAT
GAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAACAT
CGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGGATA
CGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAGCAA
GGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGAATGGCTGG
TACAAGGAACTACGACTTTCTGATCAAGTTACTACTTATTGGGGACTCTG
GGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACTCGTTCACT
CCGTCGTTCATTACTACCATCGGAATCGACTTCAAAATACGTACCATCGA
ATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGCTGGGCAAG
AGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCATGGGCATT
CTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAACATTCGCAC
CTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCACAAGATCC
TTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGTCAACCGAG
CAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTTGAAGTATC
GGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCTCGCATCCG
ACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCGGCTCTCAG
GGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGCGCAGGTGG
GAAGTGCTGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YPT2ATCC10864_008847Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008847-T1.exon1ATCC10864_008847-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008847-T1.exon2ATCC10864_008847-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008847-T1.exon3ATCC10864_008847-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008847-T1.cdsATCC10864_008847-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008847-T1ATCC10864_008847-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027417
PFAMPF00025
PFAMPF00071
InterProIPR001806
PFAMPF08477
InterProIPR005225
Properties
Property NameValue
ProductGTPase Ypt2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000204supercontigMCQH01000204:29209..29953 +
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