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ATCC10864_008862-T1, ATCC10864_008862-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008862-T1
Unique NameATCC10864_008862-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000204:74663..75996+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008862-T1 ID=ATCC10864_008862-T1|Name=ATCC10864_008862-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1334bp|location=Sequence derived from alignment at MCQH01000204:74663..75996+ (Aspergillus niger ATCC 10864)
ATGGCGCTCGACAACTATTATCGCAATAAGATTGAGAGCATGAAGCTCGA
AATCATCCAGGGTCAGGCTGTCTTACGGAGACTGGAAGCACAGCGCAATG
ACTATAATTCGAGGGTGCGGTTACTTCGGGAAGAACTCGGCTTGCTTCAA
CAGCCTGGTTCCTATGTCGGGGAGGTAGTCAAAGTGATGAGCACCAAGAA
AGTCCTCGTCAAAGTGCATCCCGAGGGCAAATATGGTAAACCCCCTCTGC
AGATTTGCTTAGCTCGAGTCTTTGCTTGCTCAACTCCGTGCGTCCCTTAC
TAACTTCTCTTGCGACGCTACAGTGGTGGACATTGCGGATGGCGTTGATA
TCAGCAAGCTCACTGTAGGAAAGCGAGTCGCTTTACTCTCGGATTCCTAT
AAGTTGGAGAAGATGCTACCCTCGTCGGTTGACCCGCTGGTGTCGCTAAT
GATGGTCGAGAAAGTGCCTGACAGCACGTATGACATGATCGGTGGACTTG
ACCAGCAGATCAAGGAGATCAAGGAAGTCATCGAGCTTGGTTTAAAACAT
CCGGAGTTGTTCGAGTCGCTTGGTATCGCACAACCGAAGGGAGTACTCCT
CTACGGACCGCCAGGAACCGGCAAAACCCTGCTTGCCCGAGCGGTAGCCC
ATCACACCGATTGTCGGTTCATCAGAGTGAGCGGATCGGAATTGGTGCAA
AAATACATCGGTGAAGGTAGCCGCATGGTTCGCGAGCTATTCGTAATGGC
TCGAGAACATGCTCCGAGTATCATATTCATGGATGAGATTGATAGCATTG
GATCCAGCCGCATAGACTCGGCGGGTTCGGGTGATTCAGAGGTACAACGG
ACGATGCTTGAGCTCCTCAATCAACTGGACGGATTTGAACCTACCAAGAA
CATCAAGATCATCATGGCCACCAACCGGCTTGACATCCTGGACCCGGCCT
TGTTACGTCCTGGCCGGATTGACCGGAAGATTGAGTTCCCTCCGCCGTCG
TGAGTATCCCTTGTGACTTGGCTCTTATCGGGTGAAGCTTATGTTACGTT
TTACTGATCAATTTCCTTCTTTCAGGGTGGAGGCTCGTGCCGATATTCTG
CGAATCCACTCGCGGTCAATGAACTTGACGCGAGGCATCAACCTAACGAA
GATTGCGGAGAAGATGAACGGATGTTCTGGAGCTGAGCTGAAGGGTGTGT
GCACGGAAGCAGGCATGTACGCTCTGCGAGAGCGGCGAGTACACGTTACG
CAAGAGGATTTCGACCTAGCCACCGCCAAGATCCTCAACAAGCACGACGA
CAAAGAAGTCGCGGTCTCTAAGCTTTTCAAGTAA
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Coding sequence (CDS) from alignment at MCQH01000204:74663..75996+

>ATCC10864_008862-T1 ID=ATCC10864_008862-T1|Name=ATCC10864_008862-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3510bp|location=Sequence derived from alignment at MCQH01000204:74663..75996+ (Aspergillus niger ATCC 10864)
ATGGCGCTCGACAACTATTATCGCAATAAGATTGAGAGCATGAAGCTCGA
AATCATCCAGGGTCAGGCTGTCTTACGGAGACTGGAAGCACAGCGCAATG
ACTATAATTCGAGGGTGCGGTTACTTCGGGAAGAACTCGGCTTGCTTCAA
CAGCCTGGTTCCTATGTCGGGGAGGTAGTCAAAGTGATGAGCACCAAGAA
AGTCCTCGTCAAAGTGCATCCCGAGGGCAAATATGTGGTGGACATTGCGG
ATGGCGTTGATATCAGCAAGCTCACTGTAGGAAAGCGAGTCGCTTTACTC
TCGGATTCCTATAAGTTGGAGAAGATGCTACCCTCGTCGGTTGACCCGCT
GGTGTCGCTAATGATGGTCGAGAAAGTGCCTGACAGCACGTATGACATGA
TCGGTGGACTTGACCAGCAGATCAAGGAGATCAAGGAAGTCATCGAGCTT
GGTTTAAAACATCCGGAGTTGTTCGAGTCGCTTGGTATCGCACAACCGAA
GGGAGTACTCCTCTACGGACCGCCAGGAACCGGCAAAACCCTGCTTGCCC
GAGCGGTAGCCCATCACACCGATTGTCGGTTCATCAGAGTGAGCGGATCG
GAATTGGTGCAAAAATACATCGGTGAAGGTAGCCGCATGGTTCGCGAGCT
ATTCGTAATGGCTCGAGAACATGCTCCGAGTATCATATTCATGGATGAGA
TTGATAGCATTGGATCCAGCCGCATAGACTCGGCGGGTTCGGGTGATTCA
GAGGTACAACGGACGATGCTTGAGCTCCTCAATCAACTGGACGGATTTGA
ACCTACCAAGAACATCAAGATCATCATGGCCACCAACCGGCTTGACATCC
TGGACCCGGCCTTGTTACGTCCTGGCCGGATTGACCGGAAGATTGAGTTC
CCTCCGCCGTCGGTGGAGGCTCGTGCCGATATTCTGCGAATCCACTCGCG
GTCAATGAACTTGACGCGAGGCATCAACCTAACGAAGATTGCGGAGAAGA
TGAACGGATGTTCTGGAGCTGAGCTGAAGGGTGTGTGCACGGAAGCAGGC
ATGTACGCTCTGCGAGAGCGGCGAGTACACGTTACGCAAGAGGATTTCGA
CCTAGCCACCGCCAAGATCCTCAACAAGCACGACGACAAAGAAGTCGCGG
TCTCTAAGCTTTTCAAGTAAATGGCGCTCGACAACTATTATCGCAATAAG
ATTGAGAGCATGAAGCTCGAAATCATCCAGGGTCAGGCTGTCTTACGGAG
ACTGGAAGCACAGCGCAATGACTATAATTCGAGGGTGCGGTTACTTCGGG
AAGAACTCGGCTTGCTTCAACAGCCTGGTTCCTATGTCGGGGAGGTAGTC
AAAGTGATGAGCACCAAGAAAGTCCTCGTCAAAGTGCATCCCGAGGGCAA
ATATGTGGTGGACATTGCGGATGGCGTTGATATCAGCAAGCTCACTGTAG
GAAAGCGAGTCGCTTTACTCTCGGATTCCTATAAGTTGGAGAAGATGCTA
CCCTCGTCGGTTGACCCGCTGGTGTCGCTAATGATGGTCGAGAAAGTGCC
TGACAGCACGTATGACATGATCGGTGGACTTGACCAGCAGATCAAGGAGA
TCAAGGAAGTCATCGAGCTTGGTTTAAAACATCCGGAGTTGTTCGAGTCG
CTTGGTATCGCACAACCGAAGGGAGTACTCCTCTACGGACCGCCAGGAAC
CGGCAAAACCCTGCTTGCCCGAGCGGTAGCCCATCACACCGATTGTCGGT
TCATCAGAGTGAGCGGATCGGAATTGGTGCAAAAATACATCGGTGAAGGT
AGCCGCATGGTTCGCGAGCTATTCGTAATGGCTCGAGAACATGCTCCGAG
TATCATATTCATGGATGAGATTGATAGCATTGGATCCAGCCGCATAGACT
CGGCGGGTTCGGGTGATTCAGAGGTACAACGGACGATGCTTGAGCTCCTC
AATCAACTGGACGGATTTGAACCTACCAAGAACATCAAGATCATCATGGC
CACCAACCGGCTTGACATCCTGGACCCGGCCTTGTTACGTCCTGGCCGGA
TTGACCGGAAGATTGAGTTCCCTCCGCCGTCGGTGGAGGCTCGTGCCGAT
ATTCTGCGAATCCACTCGCGGTCAATGAACTTGACGCGAGGCATCAACCT
AACGAAGATTGCGGAGAAGATGAACGGATGTTCTGGAGCTGAGCTGAAGG
GTGTGTGCACGGAAGCAGGCATGTACGCTCTGCGAGAGCGGCGAGTACAC
GTTACGCAAGAGGATTTCGACCTAGCCACCGCCAAGATCCTCAACAAGCA
CGACGACAAAGAAGTCGCGGTCTCTAAGCTTTTCAAGTAAATGGCGCTCG
ACAACTATTATCGCAATAAGATTGAGAGCATGAAGCTCGAAATCATCCAG
GGTCAGGCTGTCTTACGGAGACTGGAAGCACAGCGCAATGACTATAATTC
GAGGGTGCGGTTACTTCGGGAAGAACTCGGCTTGCTTCAACAGCCTGGTT
CCTATGTCGGGGAGGTAGTCAAAGTGATGAGCACCAAGAAAGTCCTCGTC
AAAGTGCATCCCGAGGGCAAATATGTGGTGGACATTGCGGATGGCGTTGA
TATCAGCAAGCTCACTGTAGGAAAGCGAGTCGCTTTACTCTCGGATTCCT
ATAAGTTGGAGAAGATGCTACCCTCGTCGGTTGACCCGCTGGTGTCGCTA
ATGATGGTCGAGAAAGTGCCTGACAGCACGTATGACATGATCGGTGGACT
TGACCAGCAGATCAAGGAGATCAAGGAAGTCATCGAGCTTGGTTTAAAAC
ATCCGGAGTTGTTCGAGTCGCTTGGTATCGCACAACCGAAGGGAGTACTC
CTCTACGGACCGCCAGGAACCGGCAAAACCCTGCTTGCCCGAGCGGTAGC
CCATCACACCGATTGTCGGTTCATCAGAGTGAGCGGATCGGAATTGGTGC
AAAAATACATCGGTGAAGGTAGCCGCATGGTTCGCGAGCTATTCGTAATG
GCTCGAGAACATGCTCCGAGTATCATATTCATGGATGAGATTGATAGCAT
TGGATCCAGCCGCATAGACTCGGCGGGTTCGGGTGATTCAGAGGTACAAC
GGACGATGCTTGAGCTCCTCAATCAACTGGACGGATTTGAACCTACCAAG
AACATCAAGATCATCATGGCCACCAACCGGCTTGACATCCTGGACCCGGC
CTTGTTACGTCCTGGCCGGATTGACCGGAAGATTGAGTTCCCTCCGCCGT
CGGTGGAGGCTCGTGCCGATATTCTGCGAATCCACTCGCGGTCAATGAAC
TTGACGCGAGGCATCAACCTAACGAAGATTGCGGAGAAGATGAACGGATG
TTCTGGAGCTGAGCTGAAGGGTGTGTGCACGGAAGCAGGCATGTACGCTC
TGCGAGAGCGGCGAGTACACGTTACGCAAGAGGATTTCGACCTAGCCACC
GCCAAGATCCTCAACAAGCACGACGACAAAGAAGTCGCGGTCTCTAAGCT
TTTCAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036402proteasome-activating ATPase activity
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LET1ATCC10864_008862Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008862-T1.exon1ATCC10864_008862-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008862-T1.exon2ATCC10864_008862-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008862-T1.exon3ATCC10864_008862-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008862-T1.cdsATCC10864_008862-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008862-T1ATCC10864_008862-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR032501
InterProIPR041569
PFAMPF07724
PFAMPF00004
InterProIPR027417
InterProIPR005937
PFAMPF17862
PFAMPF16450
InterProIPR003959
InterProIPR003960
InterProIPR003593
InterProIPR035261
PFAMPF07728
Properties
Property NameValue
Product26S protease regulatory subunit 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000204supercontigMCQH01000204:74663..75996 +
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