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ATCC10864_008943-T1, ATCC10864_008943-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008943-T1
Unique NameATCC10864_008943-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000204:307812..309423-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008943-T1 ID=ATCC10864_008943-T1|Name=ATCC10864_008943-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1612bp|location=Sequence derived from alignment at MCQH01000204:307812..309423- (Aspergillus niger ATCC 10864)
ATGGCCTCCACTGCTACGTGAGACTCCCTTTGAGATTCCCCTGCGGCTGA
TCGCTCGAGGTGCCTGTGAGGTTACAGATATAGTCGTCCTTTCTCGCTGG
AGATGCTGCGACCAGAAACGGTTGCTGAGCACCAGCTCGATTTTTCCCGC
GACCGCGCTTCGCCCTTGAATCGCCTAAGACTTTGTTAGGAATATGAGGA
TTGGGTGCGGCACGGTCTGGGGTATTGAGGTTGAAGGCACTGTGAACCTT
CTCCTTGAAAACAATTGTTGTGAGCTATCGTCATGTACCATTGCGCCGTG
ATAGGGCATGGTAGGGGCGAAAAGCGTCAACACCACTTCCCGAGCGTTAT
GCTTGGGGTTTTGTCGGATGAGAATTATCATACTTGGTCGTAGTCGCCGC
GGGCTTGCGAACGTTGCTGCTGAGAATGCGTGACTAGTAGTGAGCTGGTT
CGCGCGGGCTCGACAAGTGAAGAAGAAAATTTTTTCTTCTACCTCACCGA
TCAAATGCATGTCGTCGAGTGCTTTTTTATCCATTGCCTTCAGTATGAGA
ATGTGGCACTATAGCTGCAATTCTTACACTCGGCGAAAGTCTGTGTAATC
ATTACGGACAGACTGTACTGACCTTAACAGCACTGTCCCCACCAAGGAGC
AGGTTCTCGTCCCCGAGACCCTCCTGAAGAAGCGCAAGAGCCAGGAGCAG
GCTCGCGCTGTCGCCCGTGAGGAGGCCGAGAAGAAGAAGGCCGTAAGTTA
TACCTTTTTTTTATATATCCTCTTTCCCTCTTCCTTCTATAGTGATGACA
ACAACCACCACGCGACTAGACTACGGTCGATGCTGTCGCTTCGTTAACCA
TCTTTCGGGGCTGAAAATGAAGCTTCAAATGATTTCATTTCACGAGTCAT
TTGCAAAGACCATCTGCTAACAGATGAATCCAGGCCAACAAGGAGAAGCG
CGCCGTTATCTTCAAGCGTGCCGAGTCCTACGTCAAGGAGTACCGCGATG
CTGAGCGCGAGAAGATCCGCCTTGCCCGCGTTGCTCGCAAGGAGGGTAAC
TTCTACGTTGCTGACGAGCCCAAGCTTGTCTTCGTTATCCGTATCAAGGG
GTAAGTTAATCTAGCATGCCATATGAATGTCATGATATTAACAACTTGAT
AGTATCAACAAGATCCCTCCCCAGCCCCGCAAGATCCTCCAGCTGCTCCG
TCTGCTCCAGATCAACAACGGTACCTTCGTCCGTCTTACCAAGGCTACCC
AGGAGATGTTGACCATCATCAACCCCTACATTGCCTACGGTTACCCCAAC
CTCAAGTCCGTCCGTGAGCTCGTCTACAAGCGCGGTTACGGAAAGGTCGA
CAAGCAGCGTGTTCCCCTCACCGACAACCAGATCATTGAGGAGAACCTCG
GCAAGTACGGCATTGTCTGCATGGAGGATCTTATCCACGAGATCTACACC
GTTGGCCCCAACTTCAAGCAGGCCAACAACTTCCTGTGGCCCTTCAAGCT
CTCCAACCCCACTGGTGGCTTCCACACCCGCAAGTTCAAGCACTTCATCG
AGGGTGGTGACTACGGTAACCGTGAGGAGAACATCAACGGCCTCATCCGC
CAGATGAACTAG
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Coding sequence (CDS) from alignment at MCQH01000204:307812..309423-

>ATCC10864_008943-T1 ID=ATCC10864_008943-T1|Name=ATCC10864_008943-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3024bp|location=Sequence derived from alignment at MCQH01000204:307812..309423- (Aspergillus niger ATCC 10864)
TATCAACAAGATCCCTCCCCAGCCCCGCAAGATCCTCCAGCTGCTCCGTC
TGCTCCAGATCAACAACGGTACCTTCGTCCGTCTTACCAAGGCTACCCAG
GAGATGTTGACCATCATCAACCCCTACATTGCCTACGGTTACCCCAACCT
CAAGTCCGTCCGTGAGCTCGTCTACAAGCGCGGTTACGGAAAGGTCGACA
AGCAGCGTGTTCCCCTCACCGACAACCAGATCATTGAGGAGAACCTCGGC
AAGTACGGCATTGTCTGCATGGAGGATCTTATCCACGAGATCTACACCGT
TGGCCCCAACTTCAAGCAGGCCAACAACTTCCTGTGGCCCTTCAAGCTCT
CCAACCCCACTGGTGGCTTCCACACCCGCAAGTTCAAGCACTTCATCGAG
GGTGGTGACTACGGTAACCGTGAGGAGAACATCAACGGCCTCATCCGCCA
GATGAACTAGGCCAACAAGGAGAAGCGCGCCGTTATCTTCAAGCGTGCCG
AGTCCTACGTCAAGGAGTACCGCGATGCTGAGCGCGAGAAGATCCGCCTT
GCCCGCGTTGCTCGCAAGGAGGGTAACTTCTACGTTGCTGACGAGCCCAA
GCTTGTCTTCGTTATCCGTATCAAGGGCACTGTCCCCACCAAGGAGCAGG
TTCTCGTCCCCGAGACCCTCCTGAAGAAGCGCAAGAGCCAGGAGCAGGCT
CGCGCTGTCGCCCGTGAGGAGGCCGAGAAGAAGAAGGCCATGGCCTCCAC
TGCTACTATCAACAAGATCCCTCCCCAGCCCCGCAAGATCCTCCAGCTGC
TCCGTCTGCTCCAGATCAACAACGGTACCTTCGTCCGTCTTACCAAGGCT
ACCCAGGAGATGTTGACCATCATCAACCCCTACATTGCCTACGGTTACCC
CAACCTCAAGTCCGTCCGTGAGCTCGTCTACAAGCGCGGTTACGGAAAGG
TCGACAAGCAGCGTGTTCCCCTCACCGACAACCAGATCATTGAGGAGAAC
CTCGGCAAGTACGGCATTGTCTGCATGGAGGATCTTATCCACGAGATCTA
CACCGTTGGCCCCAACTTCAAGCAGGCCAACAACTTCCTGTGGCCCTTCA
AGCTCTCCAACCCCACTGGTGGCTTCCACACCCGCAAGTTCAAGCACTTC
ATCGAGGGTGGTGACTACGGTAACCGTGAGGAGAACATCAACGGCCTCAT
CCGCCAGATGAACTAGGCCAACAAGGAGAAGCGCGCCGTTATCTTCAAGC
GTGCCGAGTCCTACGTCAAGGAGTACCGCGATGCTGAGCGCGAGAAGATC
CGCCTTGCCCGCGTTGCTCGCAAGGAGGGTAACTTCTACGTTGCTGACGA
GCCCAAGCTTGTCTTCGTTATCCGTATCAAGGGCACTGTCCCCACCAAGG
AGCAGGTTCTCGTCCCCGAGACCCTCCTGAAGAAGCGCAAGAGCCAGGAG
CAGGCTCGCGCTGTCGCCCGTGAGGAGGCCGAGAAGAAGAAGGCCATGGC
CTCCACTGCTACTATCAACAAGATCCCTCCCCAGCCCCGCAAGATCCTCC
AGCTGCTCCGTCTGCTCCAGATCAACAACGGTACCTTCGTCCGTCTTACC
AAGGCTACCCAGGAGATGTTGACCATCATCAACCCCTACATTGCCTACGG
TTACCCCAACCTCAAGTCCGTCCGTGAGCTCGTCTACAAGCGCGGTTACG
GAAAGGTCGACAAGCAGCGTGTTCCCCTCACCGACAACCAGATCATTGAG
GAGAACCTCGGCAAGTACGGCATTGTCTGCATGGAGGATCTTATCCACGA
GATCTACACCGTTGGCCCCAACTTCAAGCAGGCCAACAACTTCCTGTGGC
CCTTCAAGCTCTCCAACCCCACTGGTGGCTTCCACACCCGCAAGTTCAAG
CACTTCATCGAGGGTGGTGACTACGGTAACCGTGAGGAGAACATCAACGG
CCTCATCCGCCAGATGAACTAGGCCAACAAGGAGAAGCGCGCCGTTATCT
TCAAGCGTGCCGAGTCCTACGTCAAGGAGTACCGCGATGCTGAGCGCGAG
AAGATCCGCCTTGCCCGCGTTGCTCGCAAGGAGGGTAACTTCTACGTTGC
TGACGAGCCCAAGCTTGTCTTCGTTATCCGTATCAAGGGCACTGTCCCCA
CCAAGGAGCAGGTTCTCGTCCCCGAGACCCTCCTGAAGAAGCGCAAGAGC
CAGGAGCAGGCTCGCGCTGTCGCCCGTGAGGAGGCCGAGAAGAAGAAGGC
CATGGCCTCCACTGCTACTATCAACAAGATCCCTCCCCAGCCCCGCAAGA
TCCTCCAGCTGCTCCGTCTGCTCCAGATCAACAACGGTACCTTCGTCCGT
CTTACCAAGGCTACCCAGGAGATGTTGACCATCATCAACCCCTACATTGC
CTACGGTTACCCCAACCTCAAGTCCGTCCGTGAGCTCGTCTACAAGCGCG
GTTACGGAAAGGTCGACAAGCAGCGTGTTCCCCTCACCGACAACCAGATC
ATTGAGGAGAACCTCGGCAAGTACGGCATTGTCTGCATGGAGGATCTTAT
CCACGAGATCTACACCGTTGGCCCCAACTTCAAGCAGGCCAACAACTTCC
TGTGGCCCTTCAAGCTCTCCAACCCCACTGGTGGCTTCCACACCCGCAAG
TTCAAGCACTTCATCGAGGGTGGTGACTACGGTAACCGTGAGGAGAACAT
CAACGGCCTCATCCGCCAGATGAACTAGGCCAACAAGGAGAAGCGCGCCG
TTATCTTCAAGCGTGCCGAGTCCTACGTCAAGGAGTACCGCGATGCTGAG
CGCGAGAAGATCCGCCTTGCCCGCGTTGCTCGCAAGGAGGGTAACTTCTA
CGTTGCTGACGAGCCCAAGCTTGTCTTCGTTATCCGTATCAAGGGCACTG
TCCCCACCAAGGAGCAGGTTCTCGTCCCCGAGACCCTCCTGAAGAAGCGC
AAGAGCCAGGAGCAGGCTCGCGCTGTCGCCCGTGAGGAGGCCGAGAAGAA
GAAGGCCATGGCCTCCACTGCTAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0022625cytosolic large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0000463maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL7ATCC10864_008943Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008943-T1ATCC10864_008943-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008943-T1.cdsATCC10864_008943-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008943-T1.exon4ATCC10864_008943-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008943-T1.exon3ATCC10864_008943-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008943-T1.exon2ATCC10864_008943-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008943-T1.exon1ATCC10864_008943-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005998
InterProIPR018038
PFAMPF08079
PFAMPF00327
InterProIPR036919
InterProIPR039699
InterProIPR016082
InterProIPR012988
InterProIPR035808
Properties
Property NameValue
NoteBUSCO:EOG09264P3R
Product60S ribosomal protein L7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000204supercontigMCQH01000204:307812..309423 -
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