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ATCC10864_008944-T1, ATCC10864_008944-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008944-T1
Unique NameATCC10864_008944-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000204:309758..310623+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008944-T1 ID=ATCC10864_008944-T1|Name=ATCC10864_008944-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=866bp|location=Sequence derived from alignment at MCQH01000204:309758..310623+ (Aspergillus niger ATCC 10864)
ATGGCTACTCGTCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCA
AGCCAGCCAGTCATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATC
TCTCCTCTTTACAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACC
TTCGCGCTGGAACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGC
AGAGTTCGCTCGTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCA
GCAATGTCAAAGGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGT
TTCTGGACGCAGATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGT
AGCTGTTAGAGTGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCG
GGTTAATCGGTGTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCT
ATTGGTAGTGGACTGGAGGTTACAGAGTACGTACTTACTCTTTGCTCCAT
CTTGTGATTATTGATACAGTATACTAATCTGAGCTACCTTCTGCGACATG
CAGTGATGACGTTCTCCGAGCTGTCAAGAGTCTGGAACCGCTTGGCTCTG
GGTTCTCCATTGTACATGTCGGCAGCAAGCAATATATTCGATCGATTCCC
AAAGAGCTAAACACGGACCAGGCTACTGTGCTCGAGGCAATTCAGGTTCT
TGGCTACGTGAGCATCTCTATGCTTCAAGCGAATTTGAATTGGGAGAAGG
CTCGGGCACAGACTGTCATTGATGATCTGCTGGCGGATGGCCTTGTCTGG
CTAGATGCCCAAGCGGAGGAAAATGAGTATTGGTCACCTCAAAATCTGCT
AGATGACAGTGGGTGA
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Coding sequence (CDS) from alignment at MCQH01000204:309758..310623+

>ATCC10864_008944-T1 ID=ATCC10864_008944-T1|Name=ATCC10864_008944-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1578bp|location=Sequence derived from alignment at MCQH01000204:309758..310623+ (Aspergillus niger ATCC 10864)
ATGGCTACTCGTCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCA
AGCCAGCCAGTCATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATC
TCTCCTCTTTACAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACC
TTCGCGCTGGAACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGC
AGAGTTCGCTCGTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCA
GCAATGTCAAAGGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGT
TTCTGGACGCAGATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGT
AGCTGTTAGAGTGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCG
GGTTAATCGGTGTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCT
ATTGGTAGTGGACTGGAGGTTACAGATGATGACGTTCTCCGAGCTGTCAA
GAGTCTGGAACCGCTTGGCTCTGGGTTCTCCATTGTACATGTCGGCAGCA
AGCAATATATTCGATCGATTCCCAAAGAGCTAAACACGGACCAGGCTACT
GTGCTCGAGGCAATTCAGGTTCTTGGCTACGTGAGCATCTCTATGCTTCA
AGCGAATTTGAATTGGGAGAAGGCTCGGGCACAGACTGTCATTGATGATC
TGCTGGCGGATGGCCTTGTCTGGCTAGATGCCCAAGCGGAGGAAAATGAG
TATTGGTCACCTCAAAATCTGCTAGATGACAGTGGGTGAATGGCTACTCG
TCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCAAGCCAGCCAGT
CATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATCTCTCCTCTTTA
CAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACCTTCGCGCTGGA
ACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGCAGAGTTCGCTC
GTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCAGCAATGTCAAA
GGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGTTTCTGGACGCA
GATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGTAGCTGTTAGAG
TGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCGGGTTAATCGGT
GTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCTATTGGTAGTGG
ACTGGAGGTTACAGATGATGACGTTCTCCGAGCTGTCAAGAGTCTGGAAC
CGCTTGGCTCTGGGTTCTCCATTGTACATGTCGGCAGCAAGCAATATATT
CGATCGATTCCCAAAGAGCTAAACACGGACCAGGCTACTGTGCTCGAGGC
AATTCAGGTTCTTGGCTACGTGAGCATCTCTATGCTTCAAGCGAATTTGA
ATTGGGAGAAGGCTCGGGCACAGACTGTCATTGATGATCTGCTGGCGGAT
GGCCTTGTCTGGCTAGATGCCCAAGCGGAGGAAAATGAGTATTGGTCACC
TCAAAATCTGCTAGATGACAGTGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008944ATCC10864_008944Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008944-T1.exon1ATCC10864_008944-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008944-T1.exon2ATCC10864_008944-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008944-T1.cdsATCC10864_008944-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008944-T1ATCC10864_008944-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR016689
InterProIPR036388
PFAMPF04157
InterProIPR036390
InterProIPR040608
Properties
Property NameValue
NoteBUSCO:EOG0926477X
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000204supercontigMCQH01000204:309758..310623 +
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