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ATCC10864_008945-T1, ATCC10864_008945-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008945-T1
Unique NameATCC10864_008945-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000204:311279..313965-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008945-T1 ID=ATCC10864_008945-T1|Name=ATCC10864_008945-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2687bp|location=Sequence derived from alignment at MCQH01000204:311279..313965- (Aspergillus niger ATCC 10864)
ATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAGCTCCTC
TGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGTCCGAGG
AGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCTTCCGAG
GACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAATGTTTC
CGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCAAGAGTG
CCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTGATTGAA
AATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGGTGCGTTTGG
CCCTGGAATCAAAGAATGGAATTGCGGGACCGGCAGCGGAGGGAAGGATG
GGTTTTTGATACTAACATCCGTTTTATAGAGTTTGACAAGCTGAACCGTC
AAATCGTCAAGATTGTCCAGTCTGGCCCGACCCCGAAGATCTACGTCAAG
ACCGTTGCGGACCTGGAGGATTTCGTCAACGAGACCATCTCGAAGCAGAA
GTCGAGCAACAAGAAGATGAACGCCAGCAACGCCAAGGGATTCAACGCCG
TTAAGCAGCGTATCAAGAAGAACAACAAGGACTACGCCGTTCAGATCGAC
AAGTACAGGAAGGACAAGGATGGCTTCATGGAAGCCAAGGAGGAAGTGGC
CCGTCCCGTCGCCGCCGCCCCTCGCCTGACCAAGATTGAGCGTATCGAAG
CCCCTGCTCTTTCCACCGCCGGTGATGACGATGGTTTTGCGACCGTTGGC
CGTGGCGGCAAGACCCTCCAGTACACCCCCGAGAGCATCCTGAAGCACCT
CCGCGTTATCGTCGAATCCCGCGGAAAGAAGAACACCGACCGTTTGGAGC
AGATCCGCACGATGGAGAAGCTGTTGGAGGTTGCCCAGACTCCTTACCAG
CGTATCCGCATCTACTTGACCATGATCTCCACCCGCTTCGATCTCACCTC
TTCCTCTACCAGCAACTACATGGCCGTCGATCAGTGGAAGTTCGCCGAGC
AGGAGTTCGCTACCCTTCTGTCCGTTCTCGAGAACAACCGCACCTATGTC
GTGACCGAGGGTGCCGAAGAGTGGGAGGATGATGAGAAGCAGCCCACACC
CGCCCCCGGCGAGGTCGTTCACATCCCCGGCAGCATTGTCTCGTATGTCG
AGAGACTGGATGATGAGCTCACCCGTTCCCTGCAGCACATTGACCCCCAC
ACTGCCGAGTACATCGACCGTCTGGGTGATGAGAAGCAGCTGTACGCCAA
CCTTGTGCGCACCCAGGTCTACGTCGAGGGTCTTACTCAGTCCGAGAAGA
CCGATCCCCGTCAGGACAGCCTTAACCGCGTGGTCATGAGGAGACTGGAG
CACATCTACTTCAAGCCCTCTCAGGTCGTCACGATCCTGGAGGAAGGTAC
CTGGAAGGTCCTTCCCTCCGAATTGGAATCCAACGTCACTCCCCGTGGCA
ACACGGGAGATGTGACCAACCTTGTGCAGACCCTTTGCAGCTACCTGTTC
AAGCACAGCGACGGTATCATCCGTGCTCGTGCGATGCTGTGCCAGATCTA
CTTCCTTGCTCTGCACGACCAGTACTACCGCTCTCGTGACCTGATGCTCA
TGTCCCACCTTACCGAGAACATCGCCAACTTCGACGTTTCCACCCAGATC
CTCTTCAACCGCACCCTTGTTCAGATCGGTCTGTGTGCCTTCCGGGCCGG
CCTGATCTACGAGGCTCAGACCACCCTCTCTGAGGTCTGCGGCAGTGGAC
GTCAGAAAGAGCTGTTGGCTCAGGGCATCATCCTCCAGCGCTACTCCACC
GTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAGCGTCAGCTGCCCTTCCA
CATGCACATCAACCTGGAGCTTCTCGAGTGCATCTACCTGACGTCGAGCA
TGTTCCTGGAGGTCCCTCTGATGGCTCAGACTTCTTCCTCCCCCGAGATG
AAGCGTCGTGTCATCTCCAAGACCTTCCGTCGTATGCTGGACTACAACGA
GCGCCAGGTCTTCACTGGTCCTGCTGAGAACACCCGTGACGGTGTCATCA
TGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGAAGAAGGCCGCTGAGATG
CTCAACTCGATCAAGATCTGGGATCTGATGCCCCAGCCCGACAAGGTCAA
GGAGATGCTGTCCCAGCAGATCCAGGAGGAGGGTCTCCGCACCTACCTCT
TCACCTACGCCCCCTTCTACGACAGCCTCTCCATCTCCACCCTGGCTACC
ATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCTATCATCAGCCGTATGAT
CTCTCACGAGGAATTGGCCGCTGCTCTCGACCAGGTCAACGATGCCATTG
TCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCCAGTCCCAGATCGTCACC
CTCGCCGACAAGTCGATGAACCTTCTGGAGTCCAACGAAAAGACTCTCGA
GCAGCGTACGCAAGGCATGGCCAACGCCTTCCAGCGCGATCAGGGCGCCG
GCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTGGCCAAGCCCGTGGTGGT
CCCAGATTCCCTGGTGGCCAACAAGGTCGTCGGCCTGGTGGACAGCAGTT
TAGCGGTGGTGCATTGGGCGGGGCGATCAAGGCATAA
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Coding sequence (CDS) from alignment at MCQH01000204:311279..313965-

>ATCC10864_008945-T1 ID=ATCC10864_008945-T1|Name=ATCC10864_008945-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5196bp|location=Sequence derived from alignment at MCQH01000204:311279..313965- (Aspergillus niger ATCC 10864)
AGTTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCG
ACCCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAA
CGAGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCA
ACGCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAG
GACTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCAT
GGAAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGA
CCAAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGAC
GATGGTTTTGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCC
CGAGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGA
AGAACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAG
GTTGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTC
CACCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCG
ATCAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTC
GAGAACAACCGCACCTATGTCGTGACCGAGGGTGCCGAAGAGTGGGAGGA
TGATGAGAAGCAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCG
GCAGCATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCC
CTGCAGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGA
TGAGAAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGG
GTCTTACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGC
GTGGTCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGT
CACGATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAAT
CCAACGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAG
ACCCTTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCG
TGCGATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACC
GCTCTCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAAC
TTCGACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGG
TCTGTGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCT
CTGAGGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATC
ATCCTCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCG
TCAGCGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGT
GCATCTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAG
ACTTCTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCG
TCGTATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGA
ACACCCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGAC
TGGAAGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGAT
GCCCCAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGG
AGGGTCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTC
TCCATCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGC
CGCTATCATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCG
ACCAGGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGT
CTCCAGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGA
GTCCAACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCT
TCCAGCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGT
GGTGGCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCG
TCGGCCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCA
AGGCATAAATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCC
AGCTCCTCTGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCA
GTCCGAGGAGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCT
CTTCCGAGGACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAG
AATGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGT
CAAGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGT
TGATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGAG
TTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCGAC
CCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAACG
AGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCAAC
GCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAGGA
CTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCATGG
AAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGACC
AAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGACGA
TGGTTTTGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCCCG
AGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGAAG
AACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAGGT
TGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTCCA
CCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCGAT
CAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTCGA
GAACAACCGCACCTATGTCGTGACCGAGGGTGCCGAAGAGTGGGAGGATG
ATGAGAAGCAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCGGC
AGCATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCT
GCAGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATG
AGAAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGT
CTTACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGT
GGTCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCA
CGATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCC
AACGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGAC
CCTTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTG
CGATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGC
TCTCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTT
CGACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTC
TGTGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCT
GAGGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCAT
CCTCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTC
AGCGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGC
ATCTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGAC
TTCTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTC
GTATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAAC
ACCCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTG
GAAGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGC
CCCAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAG
GGTCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTC
CATCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCG
CTATCATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGAC
CAGGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCT
CCAGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGT
CCAACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTC
CAGCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGG
TGGCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTC
GGCCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAG
GCATAAATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAG
CTCCTCTGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGT
CCGAGGAGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCT
TCCGAGGACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAA
TGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCA
AGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTG
ATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0031369translation initiation factor binding
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NIP1ATCC10864_008945Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008945-T1ATCC10864_008945-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008945-T1.cdsATCC10864_008945-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008945-T1.exon2ATCC10864_008945-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008945-T1.exon1ATCC10864_008945-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01399
InterProIPR036388
InterProIPR027516
InterProIPR000717
InterProIPR008905
InterProIPR036390
Properties
Property NameValue
NoteBUSCO:EOG092616QN
ProductTranslation initiation factor 3 subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000204supercontigMCQH01000204:311279..313965 -
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