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ATCC10864_009059-T1, ATCC10864_009059-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009059-T1
Unique NameATCC10864_009059-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:70595..71867-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009059-T1 ID=ATCC10864_009059-T1|Name=ATCC10864_009059-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1273bp|location=Sequence derived from alignment at MCQH01000208:70595..71867- (Aspergillus niger ATCC 10864)
ATGGAGCACAACGCGGATCGTGATGAGATTGTCTCTCAATTCTGCGCCAT
GACTAGGACGGATCCTCACGAGGTACATGTTAATCATCCCAGACTGAGCT
ATGGTTGCTAACTACATACTTCATCTCAGGCGCAAGGCTATCTCGCAGCC
AACGAGTGGGACCTCGAAGCCGCAGTGACCGAATTCTTCGCCGAACAAGA
TGAAGCTTCACAGGATACTGGTGCGGCTGGTGGTGGTCGCCGACTGGGCA
CTGAATCGGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCTCAT
TCCCCCTCCATTACCCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAAAAA
GAAGTTTGCAACCCTGAACGACTTTGCGTCGGGTGGAGGAGAATCTTCAG
AGGAGGACGATGCAGTGAACCAGGACTTCTTCGCTGGAGGTGAGAAGTCG
GGCTTGGCTGTGCAGAACCCCGATGATATCAAGAAGAAGATCATTGAAAA
GGCCAAAAGGTGAGGTCTTTTGGATACACTTGGTTGCTCAGGGCTGATAT
GTTTATAGGGCTCAGCCTCCGCCATCGGACGAACCTACCAGAAGGTCTTT
CTTCACCGGCACAGCACGTACCCTTGGTGGTGATGAGGCTCCCAGCAGGG
TAATCGAAGCCCCCAGTGCACCTGTTTCGCAGACACCGCAGCGCGTACAT
AGAACCCTACACTTCTGGTCAGATGGCTTCTCTGTTGATGACGGAGAGCT
GTTCAACTCCGACGACCCCGCCAACCGCGAGATCCTCGAGGGTATCCGCC
AGGGCCGTGCCCCGCTCTCCATCATGAATGTGCAGGCTGGCCAGGAGGTG
GACGTGGAGATCAAACAGCACGACGAGAAATACGTGAAGCCCAAGCCTAA
GTACAAGCCCTTTTCCGGGGCTGGACAGCGCCTCGGCAGCCCCACGCCTG
GTGTGAGGGCACCTGCGCCAGCAGCAGCTCCTACTCCCAGTCAGTCTACC
GAGCCAGCCAAGCCGGACGTAGATGAGTCGCAGCCGATAGTGACTCTTCA
GATCCGCCTTGGAGACGGCTCACGGCTCACTTCCCGGTTCAACACCACCC
ATACCATTGGTGACGTGTACCAGTTTGTGTCCGCTGCCAGCCCCAGTAGT
CAGTCGCGTCCCTGGGTATTGATGACTACGTTCCCCAGCAAGGATCTTTC
TGACAAGAGTGTTGTGCTGGGTGATATGGCGGAGTTTAAGCGGGGCGGCG
TGGTGGTACAGAAGTGGCAATAA
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Coding sequence (CDS) from alignment at MCQH01000208:70595..71867-

>ATCC10864_009059-T1 ID=ATCC10864_009059-T1|Name=ATCC10864_009059-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3501bp|location=Sequence derived from alignment at MCQH01000208:70595..71867- (Aspergillus niger ATCC 10864)
GGCTCAGCCTCCGCCATCGGACGAACCTACCAGAAGGTCTTTCTTCACCG
GCACAGCACGTACCCTTGGTGGTGATGAGGCTCCCAGCAGGGTAATCGAA
GCCCCCAGTGCACCTGTTTCGCAGACACCGCAGCGCGTACATAGAACCCT
ACACTTCTGGTCAGATGGCTTCTCTGTTGATGACGGAGAGCTGTTCAACT
CCGACGACCCCGCCAACCGCGAGATCCTCGAGGGTATCCGCCAGGGCCGT
GCCCCGCTCTCCATCATGAATGTGCAGGCTGGCCAGGAGGTGGACGTGGA
GATCAAACAGCACGACGAGAAATACGTGAAGCCCAAGCCTAAGTACAAGC
CCTTTTCCGGGGCTGGACAGCGCCTCGGCAGCCCCACGCCTGGTGTGAGG
GCACCTGCGCCAGCAGCAGCTCCTACTCCCAGTCAGTCTACCGAGCCAGC
CAAGCCGGACGTAGATGAGTCGCAGCCGATAGTGACTCTTCAGATCCGCC
TTGGAGACGGCTCACGGCTCACTTCCCGGTTCAACACCACCCATACCATT
GGTGACGTGTACCAGTTTGTGTCCGCTGCCAGCCCCAGTAGTCAGTCGCG
TCCCTGGGTATTGATGACTACGTTCCCCAGCAAGGATCTTTCTGACAAGA
GTGTTGTGCTGGGTGATATGGCGGAGTTTAAGCGGGGCGGCGTGGTGGTA
CAGAAGTGGCAATAAGCGCAAGGCTATCTCGCAGCCAACGAGTGGGACCT
CGAAGCCGCAGTGACCGAATTCTTCGCCGAACAAGATGAAGCTTCACAGG
ATACTGGTGCGGCTGGTGGTGGTCGCCGACTGGGCACTGAATCGGAACCC
TCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCTCATTCCCCCTCCATTAC
CCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAAAAAGAAGTTTGCAACCC
TGAACGACTTTGCGTCGGGTGGAGGAGAATCTTCAGAGGAGGACGATGCA
GTGAACCAGGACTTCTTCGCTGGAGGTGAGAAGTCGGGCTTGGCTGTGCA
GAACCCCGATGATATCAAGAAGAAGATCATTGAAAAGGCCAAAAGATGGA
GCACAACGCGGATCGTGATGAGATTGTCTCTCAATTCTGCGCCATGACTA
GGACGGATCCTCACGAGGGCTCAGCCTCCGCCATCGGACGAACCTACCAG
AAGGTCTTTCTTCACCGGCACAGCACGTACCCTTGGTGGTGATGAGGCTC
CCAGCAGGGTAATCGAAGCCCCCAGTGCACCTGTTTCGCAGACACCGCAG
CGCGTACATAGAACCCTACACTTCTGGTCAGATGGCTTCTCTGTTGATGA
CGGAGAGCTGTTCAACTCCGACGACCCCGCCAACCGCGAGATCCTCGAGG
GTATCCGCCAGGGCCGTGCCCCGCTCTCCATCATGAATGTGCAGGCTGGC
CAGGAGGTGGACGTGGAGATCAAACAGCACGACGAGAAATACGTGAAGCC
CAAGCCTAAGTACAAGCCCTTTTCCGGGGCTGGACAGCGCCTCGGCAGCC
CCACGCCTGGTGTGAGGGCACCTGCGCCAGCAGCAGCTCCTACTCCCAGT
CAGTCTACCGAGCCAGCCAAGCCGGACGTAGATGAGTCGCAGCCGATAGT
GACTCTTCAGATCCGCCTTGGAGACGGCTCACGGCTCACTTCCCGGTTCA
ACACCACCCATACCATTGGTGACGTGTACCAGTTTGTGTCCGCTGCCAGC
CCCAGTAGTCAGTCGCGTCCCTGGGTATTGATGACTACGTTCCCCAGCAA
GGATCTTTCTGACAAGAGTGTTGTGCTGGGTGATATGGCGGAGTTTAAGC
GGGGCGGCGTGGTGGTACAGAAGTGGCAATAAGCGCAAGGCTATCTCGCA
GCCAACGAGTGGGACCTCGAAGCCGCAGTGACCGAATTCTTCGCCGAACA
AGATGAAGCTTCACAGGATACTGGTGCGGCTGGTGGTGGTCGCCGACTGG
GCACTGAATCGGAACCCTCTGCAGGCCGTTCGCTTGGTGGCAGCTCCTCT
CATTCCCCCTCCATTACCCCGCAGCCCTCGTCCCGCAGGTCGGCCCCGAA
AAAGAAGTTTGCAACCCTGAACGACTTTGCGTCGGGTGGAGGAGAATCTT
CAGAGGAGGACGATGCAGTGAACCAGGACTTCTTCGCTGGAGGTGAGAAG
TCGGGCTTGGCTGTGCAGAACCCCGATGATATCAAGAAGAAGATCATTGA
AAAGGCCAAAAGATGGAGCACAACGCGGATCGTGATGAGATTGTCTCTCA
ATTCTGCGCCATGACTAGGACGGATCCTCACGAGGGCTCAGCCTCCGCCA
TCGGACGAACCTACCAGAAGGTCTTTCTTCACCGGCACAGCACGTACCCT
TGGTGGTGATGAGGCTCCCAGCAGGGTAATCGAAGCCCCCAGTGCACCTG
TTTCGCAGACACCGCAGCGCGTACATAGAACCCTACACTTCTGGTCAGAT
GGCTTCTCTGTTGATGACGGAGAGCTGTTCAACTCCGACGACCCCGCCAA
CCGCGAGATCCTCGAGGGTATCCGCCAGGGCCGTGCCCCGCTCTCCATCA
TGAATGTGCAGGCTGGCCAGGAGGTGGACGTGGAGATCAAACAGCACGAC
GAGAAATACGTGAAGCCCAAGCCTAAGTACAAGCCCTTTTCCGGGGCTGG
ACAGCGCCTCGGCAGCCCCACGCCTGGTGTGAGGGCACCTGCGCCAGCAG
CAGCTCCTACTCCCAGTCAGTCTACCGAGCCAGCCAAGCCGGACGTAGAT
GAGTCGCAGCCGATAGTGACTCTTCAGATCCGCCTTGGAGACGGCTCACG
GCTCACTTCCCGGTTCAACACCACCCATACCATTGGTGACGTGTACCAGT
TTGTGTCCGCTGCCAGCCCCAGTAGTCAGTCGCGTCCCTGGGTATTGATG
ACTACGTTCCCCAGCAAGGATCTTTCTGACAAGAGTGTTGTGCTGGGTGA
TATGGCGGAGTTTAAGCGGGGCGGCGTGGTGGTACAGAAGTGGCAATAAG
CGCAAGGCTATCTCGCAGCCAACGAGTGGGACCTCGAAGCCGCAGTGACC
GAATTCTTCGCCGAACAAGATGAAGCTTCACAGGATACTGGTGCGGCTGG
TGGTGGTCGCCGACTGGGCACTGAATCGGAACCCTCTGCAGGCCGTTCGC
TTGGTGGCAGCTCCTCTCATTCCCCCTCCATTACCCCGCAGCCCTCGTCC
CGCAGGTCGGCCCCGAAAAAGAAGTTTGCAACCCTGAACGACTTTGCGTC
GGGTGGAGGAGAATCTTCAGAGGAGGACGATGCAGTGAACCAGGACTTCT
TCGCTGGAGGTGAGAAGTCGGGCTTGGCTGTGCAGAACCCCGATGATATC
AAGAAGAAGATCATTGAAAAGGCCAAAAGATGGAGCACAACGCGGATCGT
GATGAGATTGTCTCTCAATTCTGCGCCATGACTAGGACGGATCCTCACGA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBX1ATCC10864_009059Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009059-T1ATCC10864_009059-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009059-T1.cdsATCC10864_009059-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009059-T1.exon3ATCC10864_009059-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009059-T1.exon2ATCC10864_009059-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009059-T1.exon1ATCC10864_009059-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009060
InterProIPR012989
PFAMPF14555
PFAMPF08059
InterProIPR029071
InterProIPR036241
InterProIPR001012
PFAMPF00789
Properties
Property NameValue
NoteBUSCO:EOG0926423H
ProductUBX domain-containing protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:70595..71867 -
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