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ATCC10864_009064-T1, ATCC10864_009064-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009064-T1
Unique NameATCC10864_009064-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:85420..86886-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009064-T1 ID=ATCC10864_009064-T1|Name=ATCC10864_009064-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1467bp|location=Sequence derived from alignment at MCQH01000208:85420..86886- (Aspergillus niger ATCC 10864)
ATGTCCGTTTGGAACCCCGATAATATTCGCGATGTTGCCGAGTCGGTCGG
TGTCGTAAACCTCAGCAATGATGTCACTGAGAACCTTGCCCGCGACGTCG
AGTACCGCATCGCGCAGGTCCTGGAAGAGGCCCTCAAATTCATGCGCCAC
AGTCGACGCACGCTACTCACGACACAAGATGTCGCGCAGGCGCTGCGCGT
GCTGGATGTGGAGCCACTGTACGGATACGAGTCTACAAGGCCTTTGCGGT
TCGGAGAGGCGTCACTGGGCCCTGGTCAGCCGTTGTTCTACGTGGAGGAT
GAAGAAGTGGACTTTGAGAAGTTGATAAATGCGCCGTTGCCCAGGGTTCC
TCGCGAGATCTCTTTCACAGGTAAACTTGGCCCTGCTGCTCTATGGAAAT
ATTTACAATGAAGTGTTGGCATGCTGACTCCATTAAGCCCATTGGTTGGC
GGTTGAAGGTGTACAACCGTCCATCCCTCAGAATCCCACGGCGGCCGACT
CGAGAAACATGGAACTGATGTCCAAGGGACCCAACGCAAGCTCTACATTG
GCGGCCATGAGTGGAGGAGGAAATGTCTCCGTCAAGCCCCTGGTGAAGCA
TGTGCTTTCTAAGGAGCTCCAGCTATACTTTGAGAAGGTCTGCAACGCCT
TCCTGGACGAGTCCAGTGAGGAATACAGGACGTCGGGTTATGCCAGTCTC
CGAGAAGACCCCGGACTACACCAGCTGGTGCCATATTTCGTGCAATTCAT
TTCGGAGAAGGTGACGCATGGGCTGAAGGATGTCTTTGTCCTGACGCAGG
TGATGCACATGGCCGAGGCTCTGGTACAAAACAAGTCTCTCTACGTGGAC
CCATATGTGAGTCATGATTGTCACATGAACAACGCGGATTACATTCCACT
GACTCCTGATAGATCGCCTCACTTGTTCCACCTATTCTGACGTGCCTGAT
CGGTCGACAACTCGGTGGCAGTGCTGAACTGACGGAGCAATTTGCCCTGC
GCGACCTTGCCGCATCGCTTCTGGGCCTCATCGCCAAGAAATATTCCAAT
TCGTCGCACACCCTCAAGCCACGACTGGCCCGGTCGTGCCTGAAGACGTT
CCTGGACCCGTCCAAACCCTTTGGGGCGCACTATGGCGCGGTGATCGGAC
TACATGCGGTTGGCGGTGCAGAGGCGGTGCGGGTGCTGATCATGCCTAAT
CTGCCGACGTACGGCAACCTGCTCAAGGATGGCATGGCGGAGGAGAGTCC
ACGCCGGCCGGAGGCAGAGCGGGTGCTTAGCGTGCTGCTGGGGGTGCTGA
ACACGCTACGGGAGGGCCGGATGGCACTGGCCAACGGTCATGGCGGGATG
GTGACGGATGGTCTTCGAGATCGGCTGAGTCAGAAAGTGGGTGAGTTCCT
GGCCGCGAAGATTAGTGACGCGGGGGAAGTTGACCTCGCTCATGCCATTG
TGGAGTCGTCCTCCTGA
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Coding sequence (CDS) from alignment at MCQH01000208:85420..86886-

>ATCC10864_009064-T1 ID=ATCC10864_009064-T1|Name=ATCC10864_009064-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4032bp|location=Sequence derived from alignment at MCQH01000208:85420..86886- (Aspergillus niger ATCC 10864)
ATCGCCTCACTTGTTCCACCTATTCTGACGTGCCTGATCGGTCGACAACT
CGGTGGCAGTGCTGAACTGACGGAGCAATTTGCCCTGCGCGACCTTGCCG
CATCGCTTCTGGGCCTCATCGCCAAGAAATATTCCAATTCGTCGCACACC
CTCAAGCCACGACTGGCCCGGTCGTGCCTGAAGACGTTCCTGGACCCGTC
CAAACCCTTTGGGGCGCACTATGGCGCGGTGATCGGACTACATGCGGTTG
GCGGTGCAGAGGCGGTGCGGGTGCTGATCATGCCTAATCTGCCGACGTAC
GGCAACCTGCTCAAGGATGGCATGGCGGAGGAGAGTCCACGCCGGCCGGA
GGCAGAGCGGGTGCTTAGCGTGCTGCTGGGGGTGCTGAACACGCTACGGG
AGGGCCGGATGGCACTGGCCAACGGTCATGGCGGGATGGTGACGGATGGT
CTTCGAGATCGGCTGAGTCAGAAAGTGGGTGAGTTCCTGGCCGCGAAGAT
TAGTGACGCGGGGGAAGTTGACCTCGCTCATGCCATTGTGGAGTCGTCCT
CCTGACCCATTGGTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTCAGA
ATCCCACGGCGGCCGACTCGAGAAACATGGAACTGATGTCCAAGGGACCC
AACGCAAGCTCTACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTCCGT
CAAGCCCCTGGTGAAGCATGTGCTTTCTAAGGAGCTCCAGCTATACTTTG
AGAAGGTCTGCAACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGGACG
TCGGGTTATGCCAGTCTCCGAGAAGACCCCGGACTACACCAGCTGGTGCC
ATATTTCGTGCAATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGGATG
TCTTTGTCCTGACGCAGGTGATGCACATGGCCGAGGCTCTGGTACAAAAC
AAGTCTCTCTACGTGGACCCATATATGTCCGTTTGGAACCCCGATAATAT
TCGCGATGTTGCCGAGTCGGTCGGTGTCGTAAACCTCAGCAATGATGTCA
CTGAGAACCTTGCCCGCGACGTCGAGTACCGCATCGCGCAGGTCCTGGAA
GAGGCCCTCAAATTCATGCGCCACAGTCGACGCACGCTACTCACGACACA
AGATGTCGCGCAGGCGCTGCGCGTGCTGGATGTGGAGCCACTGTACGGAT
ACGAGTCTACAAGGCCTTTGCGGTTCGGAGAGGCGTCACTGGGCCCTGGT
CAGCCGTTGTTCTACGTGGAGGATGAAGAAGTGGACTTTGAGAAGTTGAT
AAATGCGCCGTTGCCCAGGGTTCCTCGCGAGATCTCTTTCACAGATCGCC
TCACTTGTTCCACCTATTCTGACGTGCCTGATCGGTCGACAACTCGGTGG
CAGTGCTGAACTGACGGAGCAATTTGCCCTGCGCGACCTTGCCGCATCGC
TTCTGGGCCTCATCGCCAAGAAATATTCCAATTCGTCGCACACCCTCAAG
CCACGACTGGCCCGGTCGTGCCTGAAGACGTTCCTGGACCCGTCCAAACC
CTTTGGGGCGCACTATGGCGCGGTGATCGGACTACATGCGGTTGGCGGTG
CAGAGGCGGTGCGGGTGCTGATCATGCCTAATCTGCCGACGTACGGCAAC
CTGCTCAAGGATGGCATGGCGGAGGAGAGTCCACGCCGGCCGGAGGCAGA
GCGGGTGCTTAGCGTGCTGCTGGGGGTGCTGAACACGCTACGGGAGGGCC
GGATGGCACTGGCCAACGGTCATGGCGGGATGGTGACGGATGGTCTTCGA
GATCGGCTGAGTCAGAAAGTGGGTGAGTTCCTGGCCGCGAAGATTAGTGA
CGCGGGGGAAGTTGACCTCGCTCATGCCATTGTGGAGTCGTCCTCCTGAC
CCATTGGTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTCAGAATCCCA
CGGCGGCCGACTCGAGAAACATGGAACTGATGTCCAAGGGACCCAACGCA
AGCTCTACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTCCGTCAAGCC
CCTGGTGAAGCATGTGCTTTCTAAGGAGCTCCAGCTATACTTTGAGAAGG
TCTGCAACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGGACGTCGGGT
TATGCCAGTCTCCGAGAAGACCCCGGACTACACCAGCTGGTGCCATATTT
CGTGCAATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGGATGTCTTTG
TCCTGACGCAGGTGATGCACATGGCCGAGGCTCTGGTACAAAACAAGTCT
CTCTACGTGGACCCATATATGTCCGTTTGGAACCCCGATAATATTCGCGA
TGTTGCCGAGTCGGTCGGTGTCGTAAACCTCAGCAATGATGTCACTGAGA
ACCTTGCCCGCGACGTCGAGTACCGCATCGCGCAGGTCCTGGAAGAGGCC
CTCAAATTCATGCGCCACAGTCGACGCACGCTACTCACGACACAAGATGT
CGCGCAGGCGCTGCGCGTGCTGGATGTGGAGCCACTGTACGGATACGAGT
CTACAAGGCCTTTGCGGTTCGGAGAGGCGTCACTGGGCCCTGGTCAGCCG
TTGTTCTACGTGGAGGATGAAGAAGTGGACTTTGAGAAGTTGATAAATGC
GCCGTTGCCCAGGGTTCCTCGCGAGATCTCTTTCACAGATCGCCTCACTT
GTTCCACCTATTCTGACGTGCCTGATCGGTCGACAACTCGGTGGCAGTGC
TGAACTGACGGAGCAATTTGCCCTGCGCGACCTTGCCGCATCGCTTCTGG
GCCTCATCGCCAAGAAATATTCCAATTCGTCGCACACCCTCAAGCCACGA
CTGGCCCGGTCGTGCCTGAAGACGTTCCTGGACCCGTCCAAACCCTTTGG
GGCGCACTATGGCGCGGTGATCGGACTACATGCGGTTGGCGGTGCAGAGG
CGGTGCGGGTGCTGATCATGCCTAATCTGCCGACGTACGGCAACCTGCTC
AAGGATGGCATGGCGGAGGAGAGTCCACGCCGGCCGGAGGCAGAGCGGGT
GCTTAGCGTGCTGCTGGGGGTGCTGAACACGCTACGGGAGGGCCGGATGG
CACTGGCCAACGGTCATGGCGGGATGGTGACGGATGGTCTTCGAGATCGG
CTGAGTCAGAAAGTGGGTGAGTTCCTGGCCGCGAAGATTAGTGACGCGGG
GGAAGTTGACCTCGCTCATGCCATTGTGGAGTCGTCCTCCTGACCCATTG
GTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTCAGAATCCCACGGCGG
CCGACTCGAGAAACATGGAACTGATGTCCAAGGGACCCAACGCAAGCTCT
ACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTCCGTCAAGCCCCTGGT
GAAGCATGTGCTTTCTAAGGAGCTCCAGCTATACTTTGAGAAGGTCTGCA
ACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGGACGTCGGGTTATGCC
AGTCTCCGAGAAGACCCCGGACTACACCAGCTGGTGCCATATTTCGTGCA
ATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGGATGTCTTTGTCCTGA
CGCAGGTGATGCACATGGCCGAGGCTCTGGTACAAAACAAGTCTCTCTAC
GTGGACCCATATATGTCCGTTTGGAACCCCGATAATATTCGCGATGTTGC
CGAGTCGGTCGGTGTCGTAAACCTCAGCAATGATGTCACTGAGAACCTTG
CCCGCGACGTCGAGTACCGCATCGCGCAGGTCCTGGAAGAGGCCCTCAAA
TTCATGCGCCACAGTCGACGCACGCTACTCACGACACAAGATGTCGCGCA
GGCGCTGCGCGTGCTGGATGTGGAGCCACTGTACGGATACGAGTCTACAA
GGCCTTTGCGGTTCGGAGAGGCGTCACTGGGCCCTGGTCAGCCGTTGTTC
TACGTGGAGGATGAAGAAGTGGACTTTGAGAAGTTGATAAATGCGCCGTT
GCCCAGGGTTCCTCGCGAGATCTCTTTCACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000124SAGA complex
GO:0046695SLIK (SAGA-like) complex
GO:0005669transcription factor TFIID complex
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0016251RNA polymerase II general transcription initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
GO:0006367transcription initiation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009064ATCC10864_009064Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009064-T1ATCC10864_009064-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009064-T1.cdsATCC10864_009064-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009064-T1.exon3ATCC10864_009064-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009064-T1.exon2ATCC10864_009064-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009064-T1.exon1ATCC10864_009064-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR011442
InterProIPR016024
InterProIPR037796
InterProIPR004823
PFAMPF07571
InterProIPR009072
PFAMPF02969
Properties
Property NameValue
NoteBUSCO:EOG09260THV
NoteantiSMASH:Cluster_1000208.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:85420..86886 -
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