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ATCC10864_009073-T1, ATCC10864_009073-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009073-T1
Unique NameATCC10864_009073-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:106092..106717+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009073-T1 ID=ATCC10864_009073-T1|Name=ATCC10864_009073-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=626bp|location=Sequence derived from alignment at MCQH01000208:106092..106717+ (Aspergillus niger ATCC 10864)
ATGGGACCGCGCGTGACTAAGCTGGCCCTTGGCCCGTGCCCCGTTCGGTC
CGCCAAAAATTTCCTGCGTATCGCCGAAGTTCAAGTGCAGCGGTTTGGCA
TCGATAAACGCACTCGTTCAACACCCAGCACCTTCATTTCGTCTTCCAGT
CGCTTAACAAAACTAATCCTTCAAGTGAGTCTATTTGCAGTCTACTCCAA
TGCTACTGACTCGTACTGACTGAAGTCCTCTAGAATGCATCTTATGTGTA
TGTTTCTCCGCACTCGGACTCCCCTCGATCAATCCGAACTAACGAATGCA
CAAAGACTCTCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAAGG
TTACCGAGGACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCTCT
CCCGATGACAAGTACTCTCGGTAGGTTCTTTTCGCCGACGATCTCCAGGC
ACATTGGAGAGAATTTGTGGACTAATGATATTGGCTATTTAGGCACCGTG
TGACCCTCAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCCGGTATG
AAACCCCGAGTGCGAGTCCCCATATAGTGGATATGGCTGACGGCAGACTA
CAGACAAGGAGGCTGCTAAGCTGTAA
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Coding sequence (CDS) from alignment at MCQH01000208:106092..106717+

>ATCC10864_009073-T1 ID=ATCC10864_009073-T1|Name=ATCC10864_009073-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1935bp|location=Sequence derived from alignment at MCQH01000208:106092..106717+ (Aspergillus niger ATCC 10864)
ATGGGACCGCGCGTGACTAAGCTGGCCCTTGGCCCGTGCCCCGTTCGGTC
CGCCAAAAATTTCCTGCGTATCGCCGAAGTTCAAGTGCAGCGGTTTGGCA
TCGATAAACGCACTCGTTCAACACCCAGCACCTTCATTTCGTCTTCCAGT
CGCTTAACAAAACTAATCCTTCAATCCTCTAGAATGCATCTTATGTACTC
TCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAAGGTTACCGAGG
ACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCTCTCCCGATGAC
AAGTACTCTCGGCACCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTAT
GACCCAGCAAGCCGACAAGGAGGCTGCTAAGCTGTAAATGGGACCGCGCG
TGACTAAGCTGGCCCTTGGCCCGTGCCCCGTTCGGTCCGCCAAAAATTTC
CTGCGTATCGCCGAAGTTCAAGTGCAGCGGTTTGGCATCGATAAACGCAC
TCGTTCAACACCCAGCACCTTCATTTCGTCTTCCAGTCGCTTAACAAAAC
TAATCCTTCAATCCTCTAGAATGCATCTTATGTACTCTCTGGGCCCCGAT
GGCAAGCGGGTTTACACCCTCAAGAAGGTTACCGAGGACGGTCGCGTTAC
CAAGAGTGCTCACCCCGCCCGTTTCTCTCCCGATGACAAGTACTCTCGGC
ACCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCC
GACAAGGAGGCTGCTAAGCTGTAAATGGGACCGCGCGTGACTAAGCTGGC
CCTTGGCCCGTGCCCCGTTCGGTCCGCCAAAAATTTCCTGCGTATCGCCG
AAGTTCAAGTGCAGCGGTTTGGCATCGATAAACGCACTCGTTCAACACCC
AGCACCTTCATTTCGTCTTCCAGTCGCTTAACAAAACTAATCCTTCAATC
CTCTAGAATGCATCTTATGTACTCTCTGGGCCCCGATGGCAAGCGGGTTT
ACACCCTCAAGAAGGTTACCGAGGACGGTCGCGTTACCAAGAGTGCTCAC
CCCGCCCGTTTCTCTCCCGATGACAAGTACTCTCGGCACCGTGTGACCCT
CAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCCGACAAGGAGGCTG
CTAAGCTGTAAATGGGACCGCGCGTGACTAAGCTGGCCCTTGGCCCGTGC
CCCGTTCGGTCCGCCAAAAATTTCCTGCGTATCGCCGAAGTTCAAGTGCA
GCGGTTTGGCATCGATAAACGCACTCGTTCAACACCCAGCACCTTCATTT
CGTCTTCCAGTCGCTTAACAAAACTAATCCTTCAATCCTCTAGAATGCAT
CTTATGTACTCTCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAA
GGTTACCGAGGACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCT
CTCCCGATGACAAGTACTCTCGGCACCGTGTGACCCTCAAGAAGAGATAC
GGTCTGCTTATGACCCAGCAAGCCGACAAGGAGGCTGCTAAGCTGTAAAT
GGGACCGCGCGTGACTAAGCTGGCCCTTGGCCCGTGCCCCGTTCGGTCCG
CCAAAAATTTCCTGCGTATCGCCGAAGTTCAAGTGCAGCGGTTTGGCATC
GATAAACGCACTCGTTCAACACCCAGCACCTTCATTTCGTCTTCCAGTCG
CTTAACAAAACTAATCCTTCAATCCTCTAGAATGCATCTTATGTACTCTC
TGGGCCCCGATGGCAAGCGGGTTTACACCCTCAAGAAGGTTACCGAGGAC
GGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTTTCTCTCCCGATGACAA
GTACTCTCGGCACCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTATGA
CCCAGCAAGCCGACAAGGAGGCTGCTAAGCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0042254ribosome biogenesis
Vocabulary: Molecular Function
TermDefinition
GO:0030515snoRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009073ATCC10864_009073Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009073-T1ATCC10864_009073-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009073-T1.exon1ATCC10864_009073-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009073-T1.exon2ATCC10864_009073-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009073-T1.exon3ATCC10864_009073-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009073-T1.exon4ATCC10864_009073-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009073-T1.exon5ATCC10864_009073-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009073-T1.cdsATCC10864_009073-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007264
PFAMPF04135
InterProIPR036756
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:106092..106717 +
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