You are here

Home

ATCC10864_009077-T1, ATCC10864_009077-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009077-T1
Unique NameATCC10864_009077-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:116836..118558-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009077-T1 ID=ATCC10864_009077-T1|Name=ATCC10864_009077-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1723bp|location=Sequence derived from alignment at MCQH01000208:116836..118558- (Aspergillus niger ATCC 10864)
ATGGTCACTATCACCGCCAAATCTGAGGCAGCTTCTGCTACTTCCCCTAT
TTCTTCCAATACTATCACTACTACCCTCAACGGGGTAGGCGATCCCAAAA
ATAAAGAAAAAGATCTTCAACTTCAAGAAAAAGAAGGAGAAGAAGAAGAA
ATATCCAAAGAAACCAAAGCATACAACTCCTCCAACGGCGTAACCAGCCA
ACTCTGCACCTGGATCGCCTCCCTCCAGCTGGACGACATCCCAGACTCTG
TCCGCACCCGCGCTAAATACCTCTTCCTCGATGGCATTGCCTGTGCCCTC
GTTGGTGCGCGCGTCCCATGGTCGCAGAAAGCATTTGACGCGATGACTGC
CTTCGAGGAGAGGGGGAAGCATGTGGTCATTGGGTATGAAGAGGTATTTC
TCCCTCCTACCTATATAATCTTTTCATCCATGCTATTACATGGATGAATG
GATAGAGTTAGGATTATAAAGGTACTAATGGATTTGGCAGCGCCTCGGTG
CCATCGCCGCCGCAACCCTCAACGGCTCCTGGATCCAAGCCTGCGAAGTA
GACGACTACCACAGCGTGGCGCCTTTGCACTCCCAAGCCGTGGTCATCCC
TCCTCTCTTCGCGGCAGCCGTCGGTGCGCGGGACCATCCGACCACCCCGC
GCATCATCGACGGACGAACACTTCTTCTTGCCTCGGTAGTGGGGTTCGAA
ATTGGTCCCCGCGTCGGCATGGCGCTGCACGGCACGGAGATGCTCGCCAA
GGGATGGCACTGCGGTTCTGTTTTTGGTGCACCCGCGGCTGCAGGTAGTT
CCGCAAAACTCCTCGGTTTGTCAGCTGGTCAAATCGAAGACGCGATCGGA
GTAGCAGCGACGCAGGCATGCGGGCTCATGGCGGCGCAGTACGACGGGAT
GGTGAAGCGGATGCATCACGGGTTCGCGGCGCGGAATGGACTGTTGGGAA
CGATGTTGGCGTGGGGAGGATACGAAGGGATCAAGAAGGTGTTTGAGCGG
CCGTATGGAGGGTTTCTGGCGATGTTTGGACTGGGGTCGAAGCATACGCC
TAGTTCGAAGCCAGAGGAGGTGGCGAAGGATTTGGGGACGTTTTGGCATA
CGGCGGAATGGATTCGGTTGAAGTTGCATGCGTGCTGTGGGGGGATTCAT
GGCACGATTGAGTGTTTGGCGGAGATGCAGGAGATGTATCCGGAACGACT
TGGACGGGAGAAATTAGGAGAGATCAAGGAGATTCGGATTCAATTGAGTG
ATGCGGTGTTTCATCACTGTGGATGGGCGCCGGAGACGAGGCCGCTGACG
CCGACGGGGGCGCAGATGAATACGGCGTTTGTGGCGGCGTCACAGTTGGT
GGATGGACAGGTGTTGTTGGAGCAATTTTCGTCGGGGAAGCTGGATCGGA
ATGAGGTTTGGGAGTTGATCGGGAAGACGAGTTGTGTGCATACGACGGAG
TTGGATCAGCCGAATATTGGGTGTGGTGCGTTGATTTCGATCACGTTTGC
GGATGGTAGTCAGGTTCAGCATTCGTTGTTGAAGCCGAAGGGGGTGGACG
AACCGATTTCGAATGAGGAGATCTTGGAGAAGTTTCGTCGGCTGACAGGA
GGGTTGATCGGGGTGGAGAGGCAGGAGAAGATTGAACGAGCTGTGCTGGG
GATGGAGGAGTTGCAGGATGTGAACGAGTTGATTGAGTTGCTGAGTGTGA
ATGTGGTCAATCCGTTGCAGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000208:116836..118558-

>ATCC10864_009077-T1 ID=ATCC10864_009077-T1|Name=ATCC10864_009077-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3252bp|location=Sequence derived from alignment at MCQH01000208:116836..118558- (Aspergillus niger ATCC 10864)
CGCCTCGGTGCCATCGCCGCCGCAACCCTCAACGGCTCCTGGATCCAAGC
CTGCGAAGTAGACGACTACCACAGCGTGGCGCCTTTGCACTCCCAAGCCG
TGGTCATCCCTCCTCTCTTCGCGGCAGCCGTCGGTGCGCGGGACCATCCG
ACCACCCCGCGCATCATCGACGGACGAACACTTCTTCTTGCCTCGGTAGT
GGGGTTCGAAATTGGTCCCCGCGTCGGCATGGCGCTGCACGGCACGGAGA
TGCTCGCCAAGGGATGGCACTGCGGTTCTGTTTTTGGTGCACCCGCGGCT
GCAGGTAGTTCCGCAAAACTCCTCGGTTTGTCAGCTGGTCAAATCGAAGA
CGCGATCGGAGTAGCAGCGACGCAGGCATGCGGGCTCATGGCGGCGCAGT
ACGACGGGATGGTGAAGCGGATGCATCACGGGTTCGCGGCGCGGAATGGA
CTGTTGGGAACGATGTTGGCGTGGGGAGGATACGAAGGGATCAAGAAGGT
GTTTGAGCGGCCGTATGGAGGGTTTCTGGCGATGTTTGGACTGGGGTCGA
AGCATACGCCTAGTTCGAAGCCAGAGGAGGTGGCGAAGGATTTGGGGACG
TTTTGGCATACGGCGGAATGGATTCGGTTGAAGTTGCATGCGTGCTGTGG
GGGGATTCATGGCACGATTGAGTGTTTGGCGGAGATGCAGGAGATGTATC
CGGAACGACTTGGACGGGAGAAATTAGGAGAGATCAAGGAGATTCGGATT
CAATTGAGTGATGCGGTGTTTCATCACTGTGGATGGGCGCCGGAGACGAG
GCCGCTGACGCCGACGGGGGCGCAGATGAATACGGCGTTTGTGGCGGCGT
CACAGTTGGTGGATGGACAGGTGTTGTTGGAGCAATTTTCGTCGGGGAAG
CTGGATCGGAATGAGGTTTGGGAGTTGATCGGGAAGACGAGTTGTGTGCA
TACGACGGAGTTGGATCAGCCGAATATTGGGTGTGGTGCGTTGATTTCGA
TCACGTTTGCGGATGGTAGTCAGGTTCAGCATTCGTTGTTGAAGCCGAAG
GGGGTGGACGAACCGATTTCGAATGAGGAGATCTTGGAGAAGTTTCGTCG
GCTGACAGGAGGGTTGATCGGGGTGGAGAGGCAGGAGAAGATTGAACGAG
CTGTGCTGGGGATGGAGGAGTTGCAGGATGTGAACGAGTTGATTGAGTTG
CTGAGTGTGAATGTGGTCAATCCGTTGCAGTAGATGGTCACTATCACCGC
CAAATCTGAGGCAGCTTCTGCTACTTCCCCTATTTCTTCCAATACTATCA
CTACTACCCTCAACGGGGTAGGCGATCCCAAAAATAAAGAAAAAGATCTT
CAACTTCAAGAAAAAGAAGGAGAAGAAGAAGAAATATCCAAAGAAACCAA
AGCATACAACTCCTCCAACGGCGTAACCAGCCAACTCTGCACCTGGATCG
CCTCCCTCCAGCTGGACGACATCCCAGACTCTGTCCGCACCCGCGCTAAA
TACCTCTTCCTCGATGGCATTGCCTGTGCCCTCGTTGGTGCGCGCGTCCC
ATGGTCGCAGAAAGCATTTGACGCGATGACTGCCTTCGAGGAGAGGGGGA
AGCATGTGGTCATTGGGTATGAAGAGCGCCTCGGTGCCATCGCCGCCGCA
ACCCTCAACGGCTCCTGGATCCAAGCCTGCGAAGTAGACGACTACCACAG
CGTGGCGCCTTTGCACTCCCAAGCCGTGGTCATCCCTCCTCTCTTCGCGG
CAGCCGTCGGTGCGCGGGACCATCCGACCACCCCGCGCATCATCGACGGA
CGAACACTTCTTCTTGCCTCGGTAGTGGGGTTCGAAATTGGTCCCCGCGT
CGGCATGGCGCTGCACGGCACGGAGATGCTCGCCAAGGGATGGCACTGCG
GTTCTGTTTTTGGTGCACCCGCGGCTGCAGGTAGTTCCGCAAAACTCCTC
GGTTTGTCAGCTGGTCAAATCGAAGACGCGATCGGAGTAGCAGCGACGCA
GGCATGCGGGCTCATGGCGGCGCAGTACGACGGGATGGTGAAGCGGATGC
ATCACGGGTTCGCGGCGCGGAATGGACTGTTGGGAACGATGTTGGCGTGG
GGAGGATACGAAGGGATCAAGAAGGTGTTTGAGCGGCCGTATGGAGGGTT
TCTGGCGATGTTTGGACTGGGGTCGAAGCATACGCCTAGTTCGAAGCCAG
AGGAGGTGGCGAAGGATTTGGGGACGTTTTGGCATACGGCGGAATGGATT
CGGTTGAAGTTGCATGCGTGCTGTGGGGGGATTCATGGCACGATTGAGTG
TTTGGCGGAGATGCAGGAGATGTATCCGGAACGACTTGGACGGGAGAAAT
TAGGAGAGATCAAGGAGATTCGGATTCAATTGAGTGATGCGGTGTTTCAT
CACTGTGGATGGGCGCCGGAGACGAGGCCGCTGACGCCGACGGGGGCGCA
GATGAATACGGCGTTTGTGGCGGCGTCACAGTTGGTGGATGGACAGGTGT
TGTTGGAGCAATTTTCGTCGGGGAAGCTGGATCGGAATGAGGTTTGGGAG
TTGATCGGGAAGACGAGTTGTGTGCATACGACGGAGTTGGATCAGCCGAA
TATTGGGTGTGGTGCGTTGATTTCGATCACGTTTGCGGATGGTAGTCAGG
TTCAGCATTCGTTGTTGAAGCCGAAGGGGGTGGACGAACCGATTTCGAAT
GAGGAGATCTTGGAGAAGTTTCGTCGGCTGACAGGAGGGTTGATCGGGGT
GGAGAGGCAGGAGAAGATTGAACGAGCTGTGCTGGGGATGGAGGAGTTGC
AGGATGTGAACGAGTTGATTGAGTTGCTGAGTGTGAATGTGGTCAATCCG
TTGCAGTAGATGGTCACTATCACCGCCAAATCTGAGGCAGCTTCTGCTAC
TTCCCCTATTTCTTCCAATACTATCACTACTACCCTCAACGGGGTAGGCG
ATCCCAAAAATAAAGAAAAAGATCTTCAACTTCAAGAAAAAGAAGGAGAA
GAAGAAGAAATATCCAAAGAAACCAAAGCATACAACTCCTCCAACGGCGT
AACCAGCCAACTCTGCACCTGGATCGCCTCCCTCCAGCTGGACGACATCC
CAGACTCTGTCCGCACCCGCGCTAAATACCTCTTCCTCGATGGCATTGCC
TGTGCCCTCGTTGGTGCGCGCGTCCCATGGTCGCAGAAAGCATTTGACGC
GATGACTGCCTTCGAGGAGAGGGGGAAGCATGTGGTCATTGGGTATGAAG
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009077ATCC10864_009077Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009077-T1ATCC10864_009077-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009077-T1.cdsATCC10864_009077-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009077-T1.exon2ATCC10864_009077-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009077-T1.exon1ATCC10864_009077-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03972
InterProIPR042188
InterProIPR005656
InterProIPR036148
PFAMPF19305
InterProIPR042183
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:116836..118558 -
Powered by Drupal