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ATCC10864_009087-T1, ATCC10864_009087-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009087-T1
Unique NameATCC10864_009087-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:138331..139984+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009087-T1 ID=ATCC10864_009087-T1|Name=ATCC10864_009087-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1654bp|location=Sequence derived from alignment at MCQH01000208:138331..139984+ (Aspergillus niger ATCC 10864)
ATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGACCT
GACTCGCTCTAACAATTTGGACGAGAAGGTGAGGATCAGCACTTTTCTCT
CTGTCTGATGTATGTACTGACTGTTAGCAGGCCTTTGATGACATGATCAA
AGAGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTCC
AGTCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCCT
CCCGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGCT
GGTTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGCC
GCTCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCACC
ACCTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACCGC
CCTCGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAAC
AGAATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAACC
GACCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGCG
TTTCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAAG
AGCTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACCAG
ACCATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGTC
CTCCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAAGA
CGGATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCACA
CACACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTGGA
ACGTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGATA
TGGCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCTCC
GCCAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGCGA
CTTCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAAGC
TCTCCGGGATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATGAC
GAAGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGCAT
GACGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCCTA
GCCGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGTC
GAAGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGCGT
CGGCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGCG
GTAACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCATG
GGTGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGACAT
GGCCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGTG
GTCTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGCCAGATG
AGTGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGACG
GTGA
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Coding sequence (CDS) from alignment at MCQH01000208:138331..139984+

>ATCC10864_009087-T1 ID=ATCC10864_009087-T1|Name=ATCC10864_009087-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3204bp|location=Sequence derived from alignment at MCQH01000208:138331..139984+ (Aspergillus niger ATCC 10864)
ATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGACCT
GACTCGCTCTAACAATTTGGACGAGAAGGCCTTTGATGACATGATCAAAG
AGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTCCAG
TCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCCTCC
CGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGCTGG
TTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGCCGC
TCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCACCAC
CTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACCGCCC
TCGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAACAG
AATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAACCGA
CCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGCGTT
TCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAAGAG
CTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACCAGAC
CATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGTCCT
CCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAAGACG
GATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCACACA
CACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTGGAAC
GTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGATATG
GCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCTCCGC
CAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGCGACT
TCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAAGCTC
TCCGGGATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATGACGA
AGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGCATGA
CGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCCTAGC
CGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGTCGA
AGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGCGTCG
GCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGCGGT
AACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCATGGG
TGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGACATGG
CCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGTGGT
CTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGCCAGATGAG
TGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGACGGT
GAATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGAC
CTGACTCGCTCTAACAATTTGGACGAGAAGGCCTTTGATGACATGATCAA
AGAGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTCC
AGTCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCCT
CCCGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGCT
GGTTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGCC
GCTCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCACC
ACCTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACCGC
CCTCGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAAC
AGAATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAACC
GACCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGCG
TTTCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAAG
AGCTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACCAG
ACCATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGTC
CTCCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAAGA
CGGATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCACA
CACACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTGGA
ACGTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGATA
TGGCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCTCC
GCCAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGCGA
CTTCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAAGC
TCTCCGGGATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATGAC
GAAGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGCAT
GACGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCCTA
GCCGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGTC
GAAGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGCGT
CGGCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGCG
GTAACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCATG
GGTGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGACAT
GGCCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGTG
GTCTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGCCAGATG
AGTGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGACG
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:00083127S RNA binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009087ATCC10864_009087Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009087-T1.exon1ATCC10864_009087-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009087-T1.exon2ATCC10864_009087-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009087-T1.cdsATCC10864_009087-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009087-T1ATCC10864_009087-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004125
InterProIPR042101
InterProIPR022941
InterProIPR036891
InterProIPR000897
InterProIPR036225
InterProIPR006325
PFAMPF02492
PFAMPF02978
PFAMPF02881
PFAMPF00448
InterProIPR003593
InterProIPR013822
InterProIPR027417
Properties
Property NameValue
NoteBUSCO:EOG09261V9P
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:138331..139984 +
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