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ATCC10864_009129-T1, ATCC10864_009129-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009129-T1
Unique NameATCC10864_009129-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:265904..266779-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009129-T1 ID=ATCC10864_009129-T1|Name=ATCC10864_009129-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=876bp|location=Sequence derived from alignment at MCQH01000208:265904..266779- (Aspergillus niger ATCC 10864)
ATGCTTTACTTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATGC
TAATGATTTGGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGAG
ACTCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATACC
TATACGGAGAGCTACATCTCCACCATCGGAGTTGACTTCGTACGTATCTG
GCCTCTCATTATTCATCACAGCTGCTAGCAGTGAACTGCGTCATAGATCC
ACATCTAACGTTCCAATACAGAAAATTCGTACCATCGAGCTGGATGGAAA
GACGGTGAAACTCCAGATCGTAAGGCAGCCCCGTTCACAACAGTCGCTCA
CCTGGCTTAACTAACGGGCGCTCTAGTGGGATACTGCAGGCCAGGAACGT
TTCCGGACAATCACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGT
CGTCTACGATGTTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGC
TTCAAGAGATTGATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTC
GGAAACAAGAGCGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGC
TAAGGTATGTGGCCAGACCTTGGTGTGGGACTCTTCATTTCTGGCAGAGT
GGGTGATTGACGCAATGTGTTGTTGGTTTAGGAATTCGCCGACAGCCTTG
GGATCCCGTTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAG
GCTTTTTTGACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGAC
TGTCAACAACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAAT
CCGGCTCCGCGGGCGGCTGCTGCTAG
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Coding sequence (CDS) from alignment at MCQH01000208:265904..266779-

>ATCC10864_009129-T1 ID=ATCC10864_009129-T1|Name=ATCC10864_009129-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2640bp|location=Sequence derived from alignment at MCQH01000208:265904..266779- (Aspergillus niger ATCC 10864)
GAATTCGCCGACAGCCTTGGGATCCCGTTCTTGGAAACCTCGGCGAAGAA
CGCTTCGAATGTCGAGCAGGCTTTTTTGACAATGGCGAGGCAGATCAAGG
AACGCATGGGCACTGCGACTGTCAACAACAAGCCAACTGTGCAGGTTGGC
CAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGCGGCTGCTGCTAGTGGGA
TACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGTCTTACTACCGTG
GTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGACATGGACTCTTTC
AACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTACGCCACTGAAGG
TGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGGAAGACAAAAAGG
TCGTGGAATACACAGTGGCTAAGAAAATTCGTACCATCGAGCTGGATGGA
AAGACGGTGAAACTCCAGATCATGCTTTACTTGGCCGGCGCGGCCCTCTG
TGTGCGTATCGATCCATATGCTAATGATTTGGCTAGATACGATTATCTTT
TCAAGTTGCTCCTCATCGGAGACTCTGGTGTCGGAAAGTCGTGCTTGCTC
CTACGTTTTGCCGACGATACCTATACGGAGAGCTACATCTCCACCATCGG
AGTTGACTTCGAATTCGCCGACAGCCTTGGGATCCCGTTCTTGGAAACCT
CGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGACAATGGCGAGG
CAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACAAGCCAACTGT
GCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCGGGCGGCTGCT
GCTAGTGGGATACTGCAGGCCAGGAACGTTTCCGGACAATCACGTCGTCT
TACTACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATGTTACCGACAT
GGACTCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATTGATCGCTACG
CCACTGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAGCGATATGGAA
GACAAAAAGGTCGTGGAATACACAGTGGCTAAGAAAATTCGTACCATCGA
GCTGGATGGAAAGACGGTGAAACTCCAGATCATGCTTTACTTGGCCGGCG
CGGCCCTCTGTGTGCGTATCGATCCATATGCTAATGATTTGGCTAGATAC
GATTATCTTTTCAAGTTGCTCCTCATCGGAGACTCTGGTGTCGGAAAGTC
GTGCTTGCTCCTACGTTTTGCCGACGATACCTATACGGAGAGCTACATCT
CCACCATCGGAGTTGACTTCGAATTCGCCGACAGCCTTGGGATCCCGTTC
TTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGGCTTTTTTGAC
AATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACTGTCAACAACA
AGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATCCGGCTCCGCG
GGCGGCTGCTGCTAGTGGGATACTGCAGGCCAGGAACGTTTCCGGACAAT
CACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGTCGTCTACGATG
TTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGCTTCAAGAGATT
GATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTCGGAAACAAGAG
CGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGCTAAGAAAATTC
GTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGATCATGCTTTAC
TTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATGCTAATGATTT
GGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGAGACTCTGGTG
TCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATACCTATACGGAG
AGCTACATCTCCACCATCGGAGTTGACTTCGAATTCGCCGACAGCCTTGG
GATCCCGTTCTTGGAAACCTCGGCGAAGAACGCTTCGAATGTCGAGCAGG
CTTTTTTGACAATGGCGAGGCAGATCAAGGAACGCATGGGCACTGCGACT
GTCAACAACAAGCCAACTGTGCAGGTTGGCCAAGGCCAGGGCGTTCAATC
CGGCTCCGCGGGCGGCTGCTGCTAGTGGGATACTGCAGGCCAGGAACGTT
TCCGGACAATCACGTCGTCTTACTACCGTGGTGCCCATGGCATCTGTGTC
GTCTACGATGTTACCGACATGGACTCTTTCAACAATGTGAAGCAGTGGCT
TCAAGAGATTGATCGCTACGCCACTGAAGGTGTCAATAAGCTCCTTGTCG
GAAACAAGAGCGATATGGAAGACAAAAAGGTCGTGGAATACACAGTGGCT
AAGAAAATTCGTACCATCGAGCTGGATGGAAAGACGGTGAAACTCCAGAT
CATGCTTTACTTGGCCGGCGCGGCCCTCTGTGTGCGTATCGATCCATATG
CTAATGATTTGGCTAGATACGATTATCTTTTCAAGTTGCTCCTCATCGGA
GACTCTGGTGTCGGAAAGTCGTGCTTGCTCCTACGTTTTGCCGACGATAC
CTATACGGAGAGCTACATCTCCACCATCGGAGTTGACTTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YPT1ATCC10864_009129Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009129-T1ATCC10864_009129-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009129-T1.cdsATCC10864_009129-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009129-T1.exon4ATCC10864_009129-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009129-T1.exon3ATCC10864_009129-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009129-T1.exon2ATCC10864_009129-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009129-T1.exon1ATCC10864_009129-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027417
PFAMPF00025
PFAMPF00071
InterProIPR001806
PFAMPF08477
InterProIPR005225
Properties
Property NameValue
ProductGTP-binding protein of the rab
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:265904..266779 -
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