|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000208:501861..502850+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_009203-T1 ID=ATCC10864_009203-T1|Name=ATCC10864_009203-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=990bp|location=Sequence derived from alignment at MCQH01000208:501861..502850+ (Aspergillus niger ATCC 10864)
ATGAGGATCCGGATTCGCGGTCCGGCGGGACAATCCACCGTCACGCTGGA
TGCAGATGCAACTGTCGACGACCTCCGGCATCAGATCACGGAGAAAACGG
GGCTGACGGCGTACGATGTAAAATATGGATATCCAAATATCAAGCCATTG
GTGCTGGGCGGGCTTCCTTCGAATCAGAAACTAGCAGATCTAGATATCAC
CCTAAACGGGGAACAACTTATCGTCACACAGCATGAGAACTCAGCCCAGT
CCCCGATCAAAAGTGAACCTCAAGCAGCAAATCTTTTGTTGAAAGCGCCA
GCTGTAAGCAGCACACCGAAGAAGGGTTCTCCTGATGATCCGCCGGAGGT
CCCTTCGCCCGACCATAGCGGAACCTTTGTTCTCCGAATCATGCCCGATG
ACAACTCTTGTCTCTTTCGTGCAGTGAGTAGTGCAACTATGGGAGGAGTA
GATGCCATGACCGAACTACGATCCGTTGTTGCGCAAACAATTCAAGCGCA
CCCAGACATCTATACCGAGGCGGTATTGGAGAAAAAGCCGGACGAATACT
GCCGCTGGATTCAGAATGAGGACTCATGGGGTGGTGGAATCGAGCTGAGC
ATCCTCAGCAAGCATTTCGATATTGAAATATGCTCCATAGACGTGCAGAC
CCTTCGCATCGATCGCTTCAACGAAGGCGCCCCGATGCGGTGTATCGTGG
TTTATTCAGGAATCCACTACGATACAATCGCGTTGTCGCCTTCCAGCCCG
CCTTATACTCACTCAGATGTGCCTCCTGACTTTGATACCAAAGTCTTCGA
CGCTGCAGATCCATTGGTCCTTGAGAAGTCGCAGGAACTCTGCCAAGTCC
TGCAATCTAGGCATTACTACACTGACACAGCTGGGTTTCGTCTTCGTTGC
AATACGTGTGGAGGGACATTCGTCGGAGAGAGAGGTGCTACACAGCATGC
CGAACAAACAGGGCATGTTGATTTCGGCGAGGCTGGCTGA back to topCoding sequence (CDS) from alignment at MCQH01000208:501861..502850+ >ATCC10864_009203-T1 ID=ATCC10864_009203-T1|Name=ATCC10864_009203-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=990bp|location=Sequence derived from alignment at MCQH01000208:501861..502850+ (Aspergillus niger ATCC 10864)
ATGAGGATCCGGATTCGCGGTCCGGCGGGACAATCCACCGTCACGCTGGA
TGCAGATGCAACTGTCGACGACCTCCGGCATCAGATCACGGAGAAAACGG
GGCTGACGGCGTACGATGTAAAATATGGATATCCAAATATCAAGCCATTG
GTGCTGGGCGGGCTTCCTTCGAATCAGAAACTAGCAGATCTAGATATCAC
CCTAAACGGGGAACAACTTATCGTCACACAGCATGAGAACTCAGCCCAGT
CCCCGATCAAAAGTGAACCTCAAGCAGCAAATCTTTTGTTGAAAGCGCCA
GCTGTAAGCAGCACACCGAAGAAGGGTTCTCCTGATGATCCGCCGGAGGT
CCCTTCGCCCGACCATAGCGGAACCTTTGTTCTCCGAATCATGCCCGATG
ACAACTCTTGTCTCTTTCGTGCAGTGAGTAGTGCAACTATGGGAGGAGTA
GATGCCATGACCGAACTACGATCCGTTGTTGCGCAAACAATTCAAGCGCA
CCCAGACATCTATACCGAGGCGGTATTGGAGAAAAAGCCGGACGAATACT
GCCGCTGGATTCAGAATGAGGACTCATGGGGTGGTGGAATCGAGCTGAGC
ATCCTCAGCAAGCATTTCGATATTGAAATATGCTCCATAGACGTGCAGAC
CCTTCGCATCGATCGCTTCAACGAAGGCGCCCCGATGCGGTGTATCGTGG
TTTATTCAGGAATCCACTACGATACAATCGCGTTGTCGCCTTCCAGCCCG
CCTTATACTCACTCAGATGTGCCTCCTGACTTTGATACCAAAGTCTTCGA
CGCTGCAGATCCATTGGTCCTTGAGAAGTCGCAGGAACTCTGCCAAGTCC
TGCAATCTAGGCATTACTACACTGACACAGCTGGGTTTCGTCTTCGTTGC
AATACGTGTGGAGGGACATTCGTCGGAGAGAGAGGTGCTACACAGCATGC
CGAACAAACAGGGCATGTTGATTTCGGCGAGGCTGGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030433 | ubiquitin-dependent ERAD pathway |
| GO:0016579 | protein deubiquitination |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity |
| GO:0101005 | ubiquitinyl hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR013087 |
| PFAM | PF02338 |
| InterPro | IPR039138 |
| InterPro | IPR003323 |
| InterPro | IPR038765 |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0116559 |
| Note | BUSCO:EOG09263S1E |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000208 | supercontig | MCQH01000208:501861..502850 + |
|
