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ATCC10864_009223-T1, ATCC10864_009223-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009223-T1
Unique NameATCC10864_009223-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:553938..554522+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009223-T1 ID=ATCC10864_009223-T1|Name=ATCC10864_009223-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=585bp|location=Sequence derived from alignment at MCQH01000208:553938..554522+ (Aspergillus niger ATCC 10864)
ATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCCCC
GGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGACTG
CTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAG
ACCTACTCGTCTTACATCTACAAGGGTGAGTAATCTTAAGACTTGTATTC
CTAGTCAATAGTTGTTGACTGTGTTATAGTCTTGAAGCAGGTCCACCCTG
ATACCGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAAT
GGTATGTCGTGAATGAAGCAGGGTTATACCTTCAGCAAGCACCTAACGCG
GTCTAGATATCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCT
TACAACAAGAAGTCCACCATCTCTTCACGGGAGATCCAGACCTCGTAAGT
CCTCTGTCGATCAAGATAGTAGCAATTCGCTAACACCTCTCTAGTGTGAG
GCTCATCCTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCA
AGGCTGTCACGAAGTACTCGTCGTCTGCCAAATAA
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Coding sequence (CDS) from alignment at MCQH01000208:553938..554522+

>ATCC10864_009223-T1 ID=ATCC10864_009223-T1|Name=ATCC10864_009223-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1704bp|location=Sequence derived from alignment at MCQH01000208:553938..554522+ (Aspergillus niger ATCC 10864)
ATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCCCC
GGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGACTG
CTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAG
ACCTACTCGTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCTGATAC
CGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGATA
TCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACAAG
AAGTCCACCATCTCTTCACGGGAGATCCAGACCTCTGTGAGGCTCATCCT
TCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGTCA
CGAAGTACTCGTCGTCTGCCAAATAAATGCCTCCCAAAGCCGCTGAGAAG
AAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAGGCTCCCGCTGA
GAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTCCGGCGACAAGA
AGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACAAG
GTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCGACTCGTGCTATGTC
CATCCTGAACTCCTTTGTCAATGATATCTTCGAGCGTGTCGCGACCGAGG
CCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCACGGGAG
ATCCAGACCTCTGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCACGC
GGTGTCGGAAGGCACCAAGGCTGTCACGAAGTACTCGTCGTCTGCCAAAT
AAATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCC
CCGGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGAC
TGCTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGG
AGACCTACTCGTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCTGAT
ACCGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGA
TATCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACA
AGAAGTCCACCATCTCTTCACGGGAGATCCAGACCTCTGTGAGGCTCATC
CTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGT
CACGAAGTACTCGTCGTCTGCCAAATAAATGCCTCCCAAAGCCGCTGAGA
AGAAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAGGCTCCCGCT
GAGAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTCCGGCGACAA
GAAGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACA
AGGTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCGACTCGTGCTATG
TCCATCCTGAACTCCTTTGTCAATGATATCTTCGAGCGTGTCGCGACCGA
GGCCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCACGGG
AGATCCAGACCTCTGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCAC
GCGGTGTCGGAAGGCACCAAGGCTGTCACGAAGTACTCGTCGTCTGCCAA
ATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTB1ATCC10864_009223Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009223-T1.exon1ATCC10864_009223-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009223-T1.exon2ATCC10864_009223-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009223-T1.exon3ATCC10864_009223-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009223-T1.exon4ATCC10864_009223-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009223-T1.cdsATCC10864_009223-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009223-T1ATCC10864_009223-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009072
PFAMPF00125
InterProIPR000558
InterProIPR007125
Properties
Property NameValue
Producthistone H2B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:553938..554522 +
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