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ATCC10864_009239-T1, ATCC10864_009239-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009239-T1
Unique NameATCC10864_009239-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000209:26896..28472-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009239-T1 ID=ATCC10864_009239-T1|Name=ATCC10864_009239-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1577bp|location=Sequence derived from alignment at MCQH01000209:26896..28472- (Aspergillus niger ATCC 10864)
ATGGTCCAAATCAGTGAAGTGAAGGGCAACTCGCGCGAGAACAGAACCGC
GGCCCACACGCATATCAAGGGTCTTGGTCTACGACAAGATGGCACTGCGG
AGGCTTCAGGAGATGGTTTCGTTGGACAGGCAACTGCTCGTGAGGTACGC
GACAACATTGGCGCTCAGAAGTCTTACTCTCTAAGCTCTTAAACTTATGT
ACTAACCCGGAGGCTTGATATGACAGGCATGCGGTGTCGTTGTTGATCTG
ATCAAGGCGAAGAAGATGGCCGGTCGTGCCGTCCTCCTGGCTGGTGGACC
CGGAACTGGAAAGACTGCTCTGGCCCTCGCCGTGTCGCAGGAGCTGGGAA
CCAAAGTCCCCTTCTGTCCGATCGTTGGTAGTGAGATCTACTCTGCTGAG
GTCAAGAAAACAGAGGCACTCATGGAGAACTTCCGGAGGGCAATTGGTAC
GCGATCCGTACAATCTTGACGCGAAAGTCTCAATAGCCTCTAATGCATCG
ATAGGTCTCCGTGTTCGCGAAACGAAGGAAGTATACGAAGGTGAAGTCAC
GGAACTTACCCCCGAAGAGACGGAGAACCCTCTGGGAGGATACGGACGCA
CGATCAGCCATCTGATCATCGGCCTAAAGTCTGCCAAGGGCACCAAGAAG
CTGCGCCTGGACCCCAGCATCTACGAAGCCATCCAAAAGGAGCGGGTCAC
CGTGGGAGACGTCATCTACATCGAAGCGAATACCGGAGCCTGCAAGCGTG
TCGGACGGTCCGATGCCTACGCCACCGAGTTCGATCTTGAAGCAGAGGAA
TACGTGCCCGTACCGAAGGGAGAGGTTCACAAGAAGAAGGAAATCGTCCA
GGATGTGACGCTGCACGATCTGGACATGGCCAATGCGCGGCCCCAGGGTG
GACAGGATGTGATGAGCATGATGGGACAGCTCATGAAGCCCAAGAAGACC
GAAATCACGGAGAAGTTGCGCCAGGAGATCAACAAGGTCGTCAACCGCTA
CATTGACCAGGGCGTTGCGGAGCTCGTTCCCGGTGTCCTCTTCATCGACG
AGGTAGACTATTCCAGCCCTTCACAGCCTTACCTTACAATCAGTTGCTAA
CCCCACCCCTAGGTTCACATGCTCGATATCGAATGCTTCACATACCTCAA
CCGGGCACTCGAATCCTCCATCTCCCCCATTGTCATCCTTGCCTCTAACC
GCGGCAACACGGTCATCCGCGGCACCGACGACATCTCCGCCGCCCACGGC
ATCCCTCCCGACCTTCTCGCCCGTCTCCTCATCATCCCCACCCACCCTTA
CTCTCCCGATGAGATCAAGACCATCATTCGCCTGCGCGCCAAGACAGAAG
GCCTCAACATCACCGACCCCGCCCTGGAGAAGGTTGCCGAGCACGGCAGC
AAGGTCAGCTTGCGGTATGCTCTGCAATTACTCACCCCGGCTAGTATCCT
TGCCAAGGTGAATGGACGCCCAGGAGGTATCGAGGAAGCCGACGTGGCAG
AGTGCGAAGACCTGTTCCTTGATGCGCGGAGGAGCGCCACGATCGTGAAC
CAGGATAGTGAGAAGTACCTCAAATAA
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Coding sequence (CDS) from alignment at MCQH01000209:26896..28472-

>ATCC10864_009239-T1 ID=ATCC10864_009239-T1|Name=ATCC10864_009239-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5508bp|location=Sequence derived from alignment at MCQH01000209:26896..28472- (Aspergillus niger ATCC 10864)
GTTCACATGCTCGATATCGAATGCTTCACATACCTCAACCGGGCACTCGA
ATCCTCCATCTCCCCCATTGTCATCCTTGCCTCTAACCGCGGCAACACGG
TCATCCGCGGCACCGACGACATCTCCGCCGCCCACGGCATCCCTCCCGAC
CTTCTCGCCCGTCTCCTCATCATCCCCACCCACCCTTACTCTCCCGATGA
GATCAAGACCATCATTCGCCTGCGCGCCAAGACAGAAGGCCTCAACATCA
CCGACCCCGCCCTGGAGAAGGTTGCCGAGCACGGCAGCAAGGTCAGCTTG
CGGTATGCTCTGCAATTACTCACCCCGGCTAGTATCCTTGCCAAGGTGAA
TGGACGCCCAGGAGGTATCGAGGAAGCCGACGTGGCAGAGTGCGAAGACC
TGTTCCTTGATGCGCGGAGGAGCGCCACGATCGTGAACCAGGATAGTGAG
AAGTACCTCAAATAAGTCTCCGTGTTCGCGAAACGAAGGAAGTATACGAA
GGTGAAGTCACGGAACTTACCCCCGAAGAGACGGAGAACCCTCTGGGAGG
ATACGGACGCACGATCAGCCATCTGATCATCGGCCTAAAGTCTGCCAAGG
GCACCAAGAAGCTGCGCCTGGACCCCAGCATCTACGAAGCCATCCAAAAG
GAGCGGGTCACCGTGGGAGACGTCATCTACATCGAAGCGAATACCGGAGC
CTGCAAGCGTGTCGGACGGTCCGATGCCTACGCCACCGAGTTCGATCTTG
AAGCAGAGGAATACGTGCCCGTACCGAAGGGAGAGGTTCACAAGAAGAAG
GAAATCGTCCAGGATGTGACGCTGCACGATCTGGACATGGCCAATGCGCG
GCCCCAGGGTGGACAGGATGTGATGAGCATGATGGGACAGCTCATGAAGC
CCAAGAAGACCGAAATCACGGAGAAGTTGCGCCAGGAGATCAACAAGGTC
GTCAACCGCTACATTGACCAGGGCGTTGCGGAGCTCGTTCCCGGTGTCCT
CTTCATCGACGAGGCATGCGGTGTCGTTGTTGATCTGATCAAGGCGAAGA
AGATGGCCGGTCGTGCCGTCCTCCTGGCTGGTGGACCCGGAACTGGAAAG
ACTGCTCTGGCCCTCGCCGTGTCGCAGGAGCTGGGAACCAAAGTCCCCTT
CTGTCCGATCGTTGGTAGTGAGATCTACTCTGCTGAGGTCAAGAAAACAG
AGGCACTCATGGAGAACTTCCGGAGGGCAATTGATGGTCCAAATCAGTGA
AGTGAAGGGCAACTCGCGCGAGAACAGAACCGCGGCCCACACGCATATCA
AGGGTCTTGGTCTACGACAAGATGGCACTGCGGAGGCTTCAGGAGATGGT
TTCGTTGGACAGGCAACTGCTCGTGAGGTTCACATGCTCGATATCGAATG
CTTCACATACCTCAACCGGGCACTCGAATCCTCCATCTCCCCCATTGTCA
TCCTTGCCTCTAACCGCGGCAACACGGTCATCCGCGGCACCGACGACATC
TCCGCCGCCCACGGCATCCCTCCCGACCTTCTCGCCCGTCTCCTCATCAT
CCCCACCCACCCTTACTCTCCCGATGAGATCAAGACCATCATTCGCCTGC
GCGCCAAGACAGAAGGCCTCAACATCACCGACCCCGCCCTGGAGAAGGTT
GCCGAGCACGGCAGCAAGGTCAGCTTGCGGTATGCTCTGCAATTACTCAC
CCCGGCTAGTATCCTTGCCAAGGTGAATGGACGCCCAGGAGGTATCGAGG
AAGCCGACGTGGCAGAGTGCGAAGACCTGTTCCTTGATGCGCGGAGGAGC
GCCACGATCGTGAACCAGGATAGTGAGAAGTACCTCAAATAAGTCTCCGT
GTTCGCGAAACGAAGGAAGTATACGAAGGTGAAGTCACGGAACTTACCCC
CGAAGAGACGGAGAACCCTCTGGGAGGATACGGACGCACGATCAGCCATC
TGATCATCGGCCTAAAGTCTGCCAAGGGCACCAAGAAGCTGCGCCTGGAC
CCCAGCATCTACGAAGCCATCCAAAAGGAGCGGGTCACCGTGGGAGACGT
CATCTACATCGAAGCGAATACCGGAGCCTGCAAGCGTGTCGGACGGTCCG
ATGCCTACGCCACCGAGTTCGATCTTGAAGCAGAGGAATACGTGCCCGTA
CCGAAGGGAGAGGTTCACAAGAAGAAGGAAATCGTCCAGGATGTGACGCT
GCACGATCTGGACATGGCCAATGCGCGGCCCCAGGGTGGACAGGATGTGA
TGAGCATGATGGGACAGCTCATGAAGCCCAAGAAGACCGAAATCACGGAG
AAGTTGCGCCAGGAGATCAACAAGGTCGTCAACCGCTACATTGACCAGGG
CGTTGCGGAGCTCGTTCCCGGTGTCCTCTTCATCGACGAGGCATGCGGTG
TCGTTGTTGATCTGATCAAGGCGAAGAAGATGGCCGGTCGTGCCGTCCTC
CTGGCTGGTGGACCCGGAACTGGAAAGACTGCTCTGGCCCTCGCCGTGTC
GCAGGAGCTGGGAACCAAAGTCCCCTTCTGTCCGATCGTTGGTAGTGAGA
TCTACTCTGCTGAGGTCAAGAAAACAGAGGCACTCATGGAGAACTTCCGG
AGGGCAATTGATGGTCCAAATCAGTGAAGTGAAGGGCAACTCGCGCGAGA
ACAGAACCGCGGCCCACACGCATATCAAGGGTCTTGGTCTACGACAAGAT
GGCACTGCGGAGGCTTCAGGAGATGGTTTCGTTGGACAGGCAACTGCTCG
TGAGGTTCACATGCTCGATATCGAATGCTTCACATACCTCAACCGGGCAC
TCGAATCCTCCATCTCCCCCATTGTCATCCTTGCCTCTAACCGCGGCAAC
ACGGTCATCCGCGGCACCGACGACATCTCCGCCGCCCACGGCATCCCTCC
CGACCTTCTCGCCCGTCTCCTCATCATCCCCACCCACCCTTACTCTCCCG
ATGAGATCAAGACCATCATTCGCCTGCGCGCCAAGACAGAAGGCCTCAAC
ATCACCGACCCCGCCCTGGAGAAGGTTGCCGAGCACGGCAGCAAGGTCAG
CTTGCGGTATGCTCTGCAATTACTCACCCCGGCTAGTATCCTTGCCAAGG
TGAATGGACGCCCAGGAGGTATCGAGGAAGCCGACGTGGCAGAGTGCGAA
GACCTGTTCCTTGATGCGCGGAGGAGCGCCACGATCGTGAACCAGGATAG
TGAGAAGTACCTCAAATAAGTCTCCGTGTTCGCGAAACGAAGGAAGTATA
CGAAGGTGAAGTCACGGAACTTACCCCCGAAGAGACGGAGAACCCTCTGG
GAGGATACGGACGCACGATCAGCCATCTGATCATCGGCCTAAAGTCTGCC
AAGGGCACCAAGAAGCTGCGCCTGGACCCCAGCATCTACGAAGCCATCCA
AAAGGAGCGGGTCACCGTGGGAGACGTCATCTACATCGAAGCGAATACCG
GAGCCTGCAAGCGTGTCGGACGGTCCGATGCCTACGCCACCGAGTTCGAT
CTTGAAGCAGAGGAATACGTGCCCGTACCGAAGGGAGAGGTTCACAAGAA
GAAGGAAATCGTCCAGGATGTGACGCTGCACGATCTGGACATGGCCAATG
CGCGGCCCCAGGGTGGACAGGATGTGATGAGCATGATGGGACAGCTCATG
AAGCCCAAGAAGACCGAAATCACGGAGAAGTTGCGCCAGGAGATCAACAA
GGTCGTCAACCGCTACATTGACCAGGGCGTTGCGGAGCTCGTTCCCGGTG
TCCTCTTCATCGACGAGGCATGCGGTGTCGTTGTTGATCTGATCAAGGCG
AAGAAGATGGCCGGTCGTGCCGTCCTCCTGGCTGGTGGACCCGGAACTGG
AAAGACTGCTCTGGCCCTCGCCGTGTCGCAGGAGCTGGGAACCAAAGTCC
CCTTCTGTCCGATCGTTGGTAGTGAGATCTACTCTGCTGAGGTCAAGAAA
ACAGAGGCACTCATGGAGAACTTCCGGAGGGCAATTGATGGTCCAAATCA
GTGAAGTGAAGGGCAACTCGCGCGAGAACAGAACCGCGGCCCACACGCAT
ATCAAGGGTCTTGGTCTACGACAAGATGGCACTGCGGAGGCTTCAGGAGA
TGGTTTCGTTGGACAGGCAACTGCTCGTGAGGTTCACATGCTCGATATCG
AATGCTTCACATACCTCAACCGGGCACTCGAATCCTCCATCTCCCCCATT
GTCATCCTTGCCTCTAACCGCGGCAACACGGTCATCCGCGGCACCGACGA
CATCTCCGCCGCCCACGGCATCCCTCCCGACCTTCTCGCCCGTCTCCTCA
TCATCCCCACCCACCCTTACTCTCCCGATGAGATCAAGACCATCATTCGC
CTGCGCGCCAAGACAGAAGGCCTCAACATCACCGACCCCGCCCTGGAGAA
GGTTGCCGAGCACGGCAGCAAGGTCAGCTTGCGGTATGCTCTGCAATTAC
TCACCCCGGCTAGTATCCTTGCCAAGGTGAATGGACGCCCAGGAGGTATC
GAGGAAGCCGACGTGGCAGAGTGCGAAGACCTGTTCCTTGATGCGCGGAG
GAGCGCCACGATCGTGAACCAGGATAGTGAGAAGTACCTCAAATAAGTCT
CCGTGTTCGCGAAACGAAGGAAGTATACGAAGGTGAAGTCACGGAACTTA
CCCCCGAAGAGACGGAGAACCCTCTGGGAGGATACGGACGCACGATCAGC
CATCTGATCATCGGCCTAAAGTCTGCCAAGGGCACCAAGAAGCTGCGCCT
GGACCCCAGCATCTACGAAGCCATCCAAAAGGAGCGGGTCACCGTGGGAG
ACGTCATCTACATCGAAGCGAATACCGGAGCCTGCAAGCGTGTCGGACGG
TCCGATGCCTACGCCACCGAGTTCGATCTTGAAGCAGAGGAATACGTGCC
CGTACCGAAGGGAGAGGTTCACAAGAAGAAGGAAATCGTCCAGGATGTGA
CGCTGCACGATCTGGACATGGCCAATGCGCGGCCCCAGGGTGGACAGGAT
GTGATGAGCATGATGGGACAGCTCATGAAGCCCAAGAAGACCGAAATCAC
GGAGAAGTTGCGCCAGGAGATCAACAAGGTCGTCAACCGCTACATTGACC
AGGGCGTTGCGGAGCTCGTTCCCGGTGTCCTCTTCATCGACGAGGCATGC
GGTGTCGTTGTTGATCTGATCAAGGCGAAGAAGATGGCCGGTCGTGCCGT
CCTCCTGGCTGGTGGACCCGGAACTGGAAAGACTGCTCTGGCCCTCGCCG
TGTCGCAGGAGCTGGGAACCAAAGTCCCCTTCTGTCCGATCGTTGGTAGT
GAGATCTACTCTGCTGAGGTCAAGAAAACAGAGGCACTCATGGAGAACTT
CCGGAGGGCAATTGATGGTCCAAATCAGTGAAGTGAAGGGCAACTCGCGC
GAGAACAGAACCGCGGCCCACACGCATATCAAGGGTCTTGGTCTACGACA
AGATGGCACTGCGGAGGCTTCAGGAGATGGTTTCGTTGGACAGGCAACTG
CTCGTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0035267NuA4 histone acetyltransferase complex
GO:0031011Ino80 complex
GO:0097255R2TP complex
Vocabulary: Molecular Function
TermDefinition
GO:00431395'-3' DNA helicase activity
GO:0005524ATP binding
GO:0003678DNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RVB1ATCC10864_009239Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009239-T1ATCC10864_009239-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009239-T1.cdsATCC10864_009239-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009239-T1.exon4ATCC10864_009239-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009239-T1.exon3ATCC10864_009239-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009239-T1.exon2ATCC10864_009239-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009239-T1.exon1ATCC10864_009239-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF17856
InterProIPR042487
InterProIPR010339
InterProIPR041048
InterProIPR037938
InterProIPR003593
InterProIPR027417
PFAMPF06068
InterProIPR027238
Properties
Property NameValue
ProductRuvB ATP-dependent DNA helicase pontin
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000209supercontigMCQH01000209:26896..28472 -
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