You are here

Home

ATCC10864_009258-T1, ATCC10864_009258-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009258-T1
Unique NameATCC10864_009258-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000209:98156..98994+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009258-T1 ID=ATCC10864_009258-T1|Name=ATCC10864_009258-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=839bp|location=Sequence derived from alignment at MCQH01000209:98156..98994+ (Aspergillus niger ATCC 10864)
ATGACCTCGACCTTCCTTCTCTCCCGGCTCCTCGCCGCGCTCACCTTATC
AAAGCCCCTATTCCTAACACCACAAGCAACAACAGCAGCAGCAGCTACCC
GCGCCCTCCCATCATACCTTCACCACAAGCACAACACCACTCAAATACAA
CAGGTACAATCCCCAAACCCAACCAGAAACACACACACACACCCTAGTAC
ACCAACCCAATCTAACAAATGCAAACAAAAACTAGACCCGCCCCCTCTCC
CACACCCCGCACCACCTCTCGTCCCCCTTCCGCCTCACCACCAACAATCC
CAACACATACACTCCCGAAGATGCCGAAGGCGAATACTACAGCCCCTACA
AACCGAAACGCCAATGGCCACCGGACATGTCGAAGCTCTCTCCGAAGCAC
CAGTTCCGTTTAGAACGGAAGTACCGGCGTCGCGCGGCGCTGAAATACGC
TCGGCCGAAGTGGGTTAAAGCGACCAAGATTACTCAGTGGGTGGTTATTG
GGTGTATGTACAATCTATTCCCACCGATACTGTTTGGTTTGGAGATGGCG
GCGAATCACACGTGTGGCGTGACATTGCTTGCTAGATTGGGAAGGCTAAC
GTACATTATGGGATTTAGTCGTTCTGGTGTATGCGTTGCTCTTCATGGAG
TGGGATGAGCGCGGGAGTCCGTTTGATGAGGTGAGTGATATTTATCTACC
TGCTGAGTATGGTTGAGGCAGGTGAGCTTACTGTGGTTAGATTCGACGGA
CGTTCTTTGCTGGTGTCAAGGGTGCTTTCTCGACGCCGCCGCCTCCTCGT
CCGGTGAAGAGGTCGGAGGATGAGTCAGGTGCGCAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000209:98156..98994+

>ATCC10864_009258-T1 ID=ATCC10864_009258-T1|Name=ATCC10864_009258-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2328bp|location=Sequence derived from alignment at MCQH01000209:98156..98994+ (Aspergillus niger ATCC 10864)
ATGACCTCGACCTTCCTTCTCTCCCGGCTCCTCGCCGCGCTCACCTTATC
AAAGCCCCTATTCCTAACACCACAAGCAACAACAGCAGCAGCAGCTACCC
GCGCCCTCCCATCATACCTTCACCACAAGCACAACACCACTCAAATACAA
CAGACCCGCCCCCTCTCCCACACCCCGCACCACCTCTCGTCCCCCTTCCG
CCTCACCACCAACAATCCCAACACATACACTCCCGAAGATGCCGAAGGCG
AATACTACAGCCCCTACAAACCGAAACGCCAATGGCCACCGGACATGTCG
AAGCTCTCTCCGAAGCACCAGTTCCGTTTAGAACGGAAGTACCGGCGTCG
CGCGGCGCTGAAATACGCTCGGCCGAAGTGGGTTAAAGCGACCAAGATTA
CTCAGTGGGTGGTTATTGGGTTCGTTCTGGTGTATGCGTTGCTCTTCATG
GAGTGGGATGAGCGCGGGAGTCCGTTTGATGAGATTCGACGGACGTTCTT
TGCTGGTGTCAAGGGTGCTTTCTCGACGCCGCCGCCTCCTCGTCCGGTGA
AGAGGTCGGAGGATGAGTCAGGTGCGCAATAAATGACCTCGACCTTCCTT
CTCTCCCGGCTCCTCGCCGCGCTCACCTTATCAAAGCCCCTATTCCTAAC
ACCACAAGCAACAACAGCAGCAGCAGCTACCCGCGCCCTCCCATCATACC
TTCACCACAAGCACAACACCACTCAAATACAACAGACCCGCCCCCTCTCC
CACACCCCGCACCACCTCTCGTCCCCCTTCCGCCTCACCACCAACAATCC
CAACACATACACTCCCGAAGATGCCGAAGGCGAATACTACAGCCCCTACA
AACCGAAACGCCAATGGCCACCGGACATGTCGAAGCTCTCTCCGAAGCAC
CAGTTCCGTTTAGAACGGAAGTACCGGCGTCGCGCGGCGCTGAAATACGC
TCGGCCGAAGTGGGTTAAAGCGACCAAGATTACTCAGTGGGTGGTTATTG
GGTTCGTTCTGGTGTATGCGTTGCTCTTCATGGAGTGGGATGAGCGCGGG
AGTCCGTTTGATGAGATTCGACGGACGTTCTTTGCTGGTGTCAAGGGTGC
TTTCTCGACGCCGCCGCCTCCTCGTCCGGTGAAGAGGTCGGAGGATGAGT
CAGGTGCGCAATAAATGACCTCGACCTTCCTTCTCTCCCGGCTCCTCGCC
GCGCTCACCTTATCAAAGCCCCTATTCCTAACACCACAAGCAACAACAGC
AGCAGCAGCTACCCGCGCCCTCCCATCATACCTTCACCACAAGCACAACA
CCACTCAAATACAACAGACCCGCCCCCTCTCCCACACCCCGCACCACCTC
TCGTCCCCCTTCCGCCTCACCACCAACAATCCCAACACATACACTCCCGA
AGATGCCGAAGGCGAATACTACAGCCCCTACAAACCGAAACGCCAATGGC
CACCGGACATGTCGAAGCTCTCTCCGAAGCACCAGTTCCGTTTAGAACGG
AAGTACCGGCGTCGCGCGGCGCTGAAATACGCTCGGCCGAAGTGGGTTAA
AGCGACCAAGATTACTCAGTGGGTGGTTATTGGGTTCGTTCTGGTGTATG
CGTTGCTCTTCATGGAGTGGGATGAGCGCGGGAGTCCGTTTGATGAGATT
CGACGGACGTTCTTTGCTGGTGTCAAGGGTGCTTTCTCGACGCCGCCGCC
TCCTCGTCCGGTGAAGAGGTCGGAGGATGAGTCAGGTGCGCAATAAATGA
CCTCGACCTTCCTTCTCTCCCGGCTCCTCGCCGCGCTCACCTTATCAAAG
CCCCTATTCCTAACACCACAAGCAACAACAGCAGCAGCAGCTACCCGCGC
CCTCCCATCATACCTTCACCACAAGCACAACACCACTCAAATACAACAGA
CCCGCCCCCTCTCCCACACCCCGCACCACCTCTCGTCCCCCTTCCGCCTC
ACCACCAACAATCCCAACACATACACTCCCGAAGATGCCGAAGGCGAATA
CTACAGCCCCTACAAACCGAAACGCCAATGGCCACCGGACATGTCGAAGC
TCTCTCCGAAGCACCAGTTCCGTTTAGAACGGAAGTACCGGCGTCGCGCG
GCGCTGAAATACGCTCGGCCGAAGTGGGTTAAAGCGACCAAGATTACTCA
GTGGGTGGTTATTGGGTTCGTTCTGGTGTATGCGTTGCTCTTCATGGAGT
GGGATGAGCGCGGGAGTCCGTTTGATGAGATTCGACGGACGTTCTTTGCT
GGTGTCAAGGGTGCTTTCTCGACGCCGCCGCCTCCTCGTCCGGTGAAGAG
GTCGGAGGATGAGTCAGGTGCGCAATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009258ATCC10864_009258Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009258-T1.exon1ATCC10864_009258-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009258-T1.exon2ATCC10864_009258-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009258-T1.exon3ATCC10864_009258-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009258-T1.exon4ATCC10864_009258-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009258-T1.cdsATCC10864_009258-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009258-T1ATCC10864_009258-T1-proteinAspergillus niger ATCC 10864polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000209supercontigMCQH01000209:98156..98994 +
Powered by Drupal