You are here

Home

ATCC10864_009516-T1, ATCC10864_009516-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009516-T1
Unique NameATCC10864_009516-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000210:543961..546673-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009516-T1 ID=ATCC10864_009516-T1|Name=ATCC10864_009516-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2713bp|location=Sequence derived from alignment at MCQH01000210:543961..546673- (Aspergillus niger ATCC 10864)
ATGGCCTCCCATCCTGCGAAGCGCAAACCTGCTGCTCCCAACAACAATTT
CTCCGCCGCCGCCGCCCGCAAACGCCAAAAAACATTTGATGCGCGCTCGC
TCGCCGTGCAGGCCGCCGACGCGGCACTATCTGCCTCCGGCGAACTAGAT
GTCGCTGCGTACGTGGAAGCAAGGGAATACGAGATCCGATCGCTCGAGTC
GGGGATCCAGCGATCGAAGAATGCGTTGACGAGTCGGGCGTTCCAGAAGG
TGCCGAGGTCTTTGAGGAGACGGACTGCGAGTCATAATGTGAAGAGGGTA
CCGAAGAGATTGAGGGCGAGGGCGAAAAGAGAGGTATATTCTCCCTTTCG
ACAATTATTGGGGGTTTGGTGGTATGCAAGAACAAGAAGATTCTAATGTA
TGATTCTGTGTCCAGATGATAGAAGACAACACCCCCACGGTATCATCACG
AACCCGCAAACCCACCGAACAAATGCGCATTCGGCTCGAAACCGCCCGCC
GACTACAGAACCTGAACGCGAAGACGAAAGCCAAGCGCACGGCCCTGAAA
GATCAGCGAGATAAAGAGGTCCGGAAGACGTTGGAAGAATCAGGTAGTCA
TGCGTATGACATTGCGCCCCGGGTGCCCAAAATCAAGAAGAATAAACTGT
CGAGGCCGAATCCGCCGGAAGCCAGGTTCAAGAAACGCCAGCAGTGCAAG
ACTTGGTTGCCGACGCATATGTTTCATGCCAAGAGGGCGCATATGGCTAC
TTCTAAGGATCCGTTGTGGCGGTTTGCGGTGCCGTTGTCGCCTACGGAGA
AGAGCTATCGGCCTACGCATCGGGCGAGGGGGTCGAGGGGCGCGGTGGCG
TGGGATATGAGCTATCTGGCTACAGTTCAGTTGGAGGGGACGGTGGGGGC
GATTGAGGGGGTGTTGAGGGCTGTTGGAGTTGAGGGGGAAAAGGCGTGGG
GTGTTAAAGGGAGGAAGTGGAGGGGTGGCACGAGGGGTTTGCGTGCTTGG
GCATATGAGTGGGAGGGTGAGAGGAGGCCGATTGCGCCGGTTACGTTGGT
TTGGTGTGCTGAGGTGAAAGGAGAGGATGTGGAGATGGTGGATGCTGATG
AAAGTGGGACGCAGAGGAAGGGAAAGAAGGACTGGAGGAAGGTGTTTGTT
CGAGTGCATCCGTCTGCGTTTTTGCAGTTGTGGAATGCCCTCCTGGGTGT
CTCGAAGAAGCAGAACCCTCCTGTTATGGTCGAGGATTTGCGGTTCGAGA
TTGGCAGTATCGAAATTACTGGTCCCGGCGCAACGGAGGCATTGCTCGCG
TCGTTCAAGCCGGTTGCTATGGATGGGAAGGATATTGCTGAGGATAGTCC
GGAGGCTATTTGGACTTCGCTCCTTGGGGTAACGAACCCTGCATCTCTGC
CGCAGGACGCAGTCCTTGGGTTCTCTGTCTCCGACCCTCGCCTCGAATTT
CCGCCCAAGACTCTGAAGCCGTCGTCGTCAGAGGATGAGATGCAACGGCT
GGCTATACTACTTTCGTCGTGGTCGCCAGACAACACGCAGACAGCCCCTG
CTCTCTTCGATCGTCGCACCCGTCTAGCTGCCGCACGCCAGCTGCCTAGC
CAAAAGGCTATCAATCGGCGTCGTTCCGAAGCTGGTCCTGGTGTACGCCC
GCCCGCCAAAGATACCGACCCCAAGGTACCTGTGATGGTTCTCGCCAGTC
GACCTGCTCACTCCAAGAGCAGCAGCGCCCCTGGAACCTGGACTGTCCTT
CTCCCATGGAAGTGTGTGCTTCCTTTTTGGTACTCGCTAATGTACTATCC
TCTCTCGAGCGGCGGAAACCCGAGATTCGGCGGTCTGAAAGAGCAGCAGC
AACTCTCATTCGAGTCAGGAGAGCCTTGGTTCCCGGGAGACTTTCCAGGA
ACCCGCGCTGGCTGGGAATGGGGCCTGCGTGAGCGAGAAGAAGCGAAGCG
CGACTGGGAGCGACGCCCCAAGGGACGCAGAACCGAGTTCGAGAGCGTCG
ACCTGCGGAATGGTCAAAAGGGCGAGATAGGACGCGGCTGGGCCTGCGAC
TGGGAAAGACTCATTCAGGGAGCACCAGAGACGAGCAGTACAACAGACAA
GGAACAACCCGAAATCAAAGCCGACGACACCACCAGCCCTCAAGACAACA
ACACCAATGCCATCCACCCACCACTGAATATCCACCAACTCTCAACATCT
GAAGCAGCACGCGCCCTAACCGACGCCTCAAACACCCCCATCAACACCTC
AGCCCTAGCAACTGTCAAACTTACCCTCCTCAACCGCGGCACACCCACAC
CCCGAGCCCGCATCTACCGACTCCCTACCACCGATCCCGAGCTCCGCCAG
AATTGGCTCTCGCTGTCATCAAACAATTCCAACGATAATCTTAGGGATCA
GCTGAAGAAGAAACAATCTCCTCGCGCCGCCCCTCTCGGCGAAGAAGATG
TCCGGCAACAGCTCGCTGCATCGCTTATCACCCCGTCTGCGGATGATGAT
GTCCGTCAAAATCACTTGCCGGTTCCAACTGAGGAAGATCTCATTGGCTT
CGTCACGACGGGCAATTACAACCTTGCGGAAGGAAAGGGTACGGGTATTG
GATCTGTTCTGTTGTCGAAGGTGGGGAAGGGGAAAGCGAGTGGCAGGAAT
ATGTGTATTATAAGGAGTGCGGGGGAGACCGTGGCGAGGGTGGGATTTTG
GGAGTTGGTTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000210:543961..546673-

>ATCC10864_009516-T1 ID=ATCC10864_009516-T1|Name=ATCC10864_009516-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5262bp|location=Sequence derived from alignment at MCQH01000210:543961..546673- (Aspergillus niger ATCC 10864)
ATGATAGAAGACAACACCCCCACGGTATCATCACGAACCCGCAAACCCAC
CGAACAAATGCGCATTCGGCTCGAAACCGCCCGCCGACTACAGAACCTGA
ACGCGAAGACGAAAGCCAAGCGCACGGCCCTGAAAGATCAGCGAGATAAA
GAGGTCCGGAAGACGTTGGAAGAATCAGGTAGTCATGCGTATGACATTGC
GCCCCGGGTGCCCAAAATCAAGAAGAATAAACTGTCGAGGCCGAATCCGC
CGGAAGCCAGGTTCAAGAAACGCCAGCAGTGCAAGACTTGGTTGCCGACG
CATATGTTTCATGCCAAGAGGGCGCATATGGCTACTTCTAAGGATCCGTT
GTGGCGGTTTGCGGTGCCGTTGTCGCCTACGGAGAAGAGCTATCGGCCTA
CGCATCGGGCGAGGGGGTCGAGGGGCGCGGTGGCGTGGGATATGAGCTAT
CTGGCTACAGTTCAGTTGGAGGGGACGGTGGGGGCGATTGAGGGGGTGTT
GAGGGCTGTTGGAGTTGAGGGGGAAAAGGCGTGGGGTGTTAAAGGGAGGA
AGTGGAGGGGTGGCACGAGGGGTTTGCGTGCTTGGGCATATGAGTGGGAG
GGTGAGAGGAGGCCGATTGCGCCGGTTACGTTGGTTTGGTGTGCTGAGGT
GAAAGGAGAGGATGTGGAGATGGTGGATGCTGATGAAAGTGGGACGCAGA
GGAAGGGAAAGAAGGACTGGAGGAAGGTGTTTGTTCGAGTGCATCCGTCT
GCGTTTTTGCAGTTGTGGAATGCCCTCCTGGGTGTCTCGAAGAAGCAGAA
CCCTCCTGTTATGGTCGAGGATTTGCGGTTCGAGATTGGCAGTATCGAAA
TTACTGGTCCCGGCGCAACGGAGGCATTGCTCGCGTCGTTCAAGCCGGTT
GCTATGGATGGGAAGGATATTGCTGAGGATAGTCCGGAGGCTATTTGGAC
TTCGCTCCTTGGGGTAACGAACCCTGCATCTCTGCCGCAGGACGCAGTCC
TTGGGTTCTCTGTCTCCGACCCTCGCCTCGAATTTCCGCCCAAGACTCTG
AAGCCGTCGTCGTCAGAGGATGAGATGCAACGGCTGGCTATACTACTTTC
GTCGTGGTCGCCAGACAACACGCAGACAGCCCCTGCTCTCTTCGATCGTC
GCACCCGTCTAGCTGCCGCACGCCAGCTGCCTAGCCAAAAGGCTATCAAT
CGGCGTCGTTCCGAAGCTGGTCCTGGTGTACGCCCGCCCGCCAAAGATAC
CGACCCCAAGGTACCTGTGATGGTTCTCGCCAGTCGACCTGCTCACTCCA
AGAGCAGCAGCGCCCCTGGAACCTGGACTGTCCTTCTCCCATGGAAGTGT
GTGCTTCCTTTTTGGTACTCGCTAATGTACTATCCTCTCTCGAGCGGCGG
AAACCCGAGATTCGGCGGTCTGAAAGAGCAGCAGCAACTCTCATTCGAGT
CAGGAGAGCCTTGGTTCCCGGGAGACTTTCCAGGAACCCGCGCTGGCTGG
GAATGGGGCCTGCGTGAGCGAGAAGAAGCGAAGCGCGACTGGGAGCGACG
CCCCAAGGGACGCAGAACCGAGTTCGAGAGCGTCGACCTGCGGAATGGTC
AAAAGGGCGAGATAGGACGCGGCTGGGCCTGCGACTGGGAAAGACTCATT
CAGGGAGCACCAGAGACGAGCAGTACAACAGACAAGGAACAACCCGAAAT
CAAAGCCGACGACACCACCAGCCCTCAAGACAACAACACCAATGCCATCC
ACCCACCACTGAATATCCACCAACTCTCAACATCTGAAGCAGCACGCGCC
CTAACCGACGCCTCAAACACCCCCATCAACACCTCAGCCCTAGCAACTGT
CAAACTTACCCTCCTCAACCGCGGCACACCCACACCCCGAGCCCGCATCT
ACCGACTCCCTACCACCGATCCCGAGCTCCGCCAGAATTGGCTCTCGCTG
TCATCAAACAATTCCAACGATAATCTTAGGGATCAGCTGAAGAAGAAACA
ATCTCCTCGCGCCGCCCCTCTCGGCGAAGAAGATGTCCGGCAACAGCTCG
CTGCATCGCTTATCACCCCGTCTGCGGATGATGATGTCCGTCAAAATCAC
TTGCCGGTTCCAACTGAGGAAGATCTCATTGGCTTCGTCACGACGGGCAA
TTACAACCTTGCGGAAGGAAAGGGTACGGGTATTGGATCTGTTCTGTTGT
CGAAGGTGGGGAAGGGGAAAGCGAGTGGCAGGAATATGTGTATTATAAGG
AGTGCGGGGGAGACCGTGGCGAGGGTGGGATTTTGGGAGTTGGTTTGAAT
GGCCTCCCATCCTGCGAAGCGCAAACCTGCTGCTCCCAACAACAATTTCT
CCGCCGCCGCCGCCCGCAAACGCCAAAAAACATTTGATGCGCGCTCGCTC
GCCGTGCAGGCCGCCGACGCGGCACTATCTGCCTCCGGCGAACTAGATGT
CGCTGCGTACGTGGAAGCAAGGGAATACGAGATCCGATCGCTCGAGTCGG
GGATCCAGCGATCGAAGAATGCGTTGACGAGTCGGGCGTTCCAGAAGGTG
CCGAGGTCTTTGAGGAGACGGACTGCGAGTCATAATGTGAAGAGGGTACC
GAAGAGATTGAGGGCGAGGGCGAAAAGAGAGATGATAGAAGACAACACCC
CCACGGTATCATCACGAACCCGCAAACCCACCGAACAAATGCGCATTCGG
CTCGAAACCGCCCGCCGACTACAGAACCTGAACGCGAAGACGAAAGCCAA
GCGCACGGCCCTGAAAGATCAGCGAGATAAAGAGGTCCGGAAGACGTTGG
AAGAATCAGGTAGTCATGCGTATGACATTGCGCCCCGGGTGCCCAAAATC
AAGAAGAATAAACTGTCGAGGCCGAATCCGCCGGAAGCCAGGTTCAAGAA
ACGCCAGCAGTGCAAGACTTGGTTGCCGACGCATATGTTTCATGCCAAGA
GGGCGCATATGGCTACTTCTAAGGATCCGTTGTGGCGGTTTGCGGTGCCG
TTGTCGCCTACGGAGAAGAGCTATCGGCCTACGCATCGGGCGAGGGGGTC
GAGGGGCGCGGTGGCGTGGGATATGAGCTATCTGGCTACAGTTCAGTTGG
AGGGGACGGTGGGGGCGATTGAGGGGGTGTTGAGGGCTGTTGGAGTTGAG
GGGGAAAAGGCGTGGGGTGTTAAAGGGAGGAAGTGGAGGGGTGGCACGAG
GGGTTTGCGTGCTTGGGCATATGAGTGGGAGGGTGAGAGGAGGCCGATTG
CGCCGGTTACGTTGGTTTGGTGTGCTGAGGTGAAAGGAGAGGATGTGGAG
ATGGTGGATGCTGATGAAAGTGGGACGCAGAGGAAGGGAAAGAAGGACTG
GAGGAAGGTGTTTGTTCGAGTGCATCCGTCTGCGTTTTTGCAGTTGTGGA
ATGCCCTCCTGGGTGTCTCGAAGAAGCAGAACCCTCCTGTTATGGTCGAG
GATTTGCGGTTCGAGATTGGCAGTATCGAAATTACTGGTCCCGGCGCAAC
GGAGGCATTGCTCGCGTCGTTCAAGCCGGTTGCTATGGATGGGAAGGATA
TTGCTGAGGATAGTCCGGAGGCTATTTGGACTTCGCTCCTTGGGGTAACG
AACCCTGCATCTCTGCCGCAGGACGCAGTCCTTGGGTTCTCTGTCTCCGA
CCCTCGCCTCGAATTTCCGCCCAAGACTCTGAAGCCGTCGTCGTCAGAGG
ATGAGATGCAACGGCTGGCTATACTACTTTCGTCGTGGTCGCCAGACAAC
ACGCAGACAGCCCCTGCTCTCTTCGATCGTCGCACCCGTCTAGCTGCCGC
ACGCCAGCTGCCTAGCCAAAAGGCTATCAATCGGCGTCGTTCCGAAGCTG
GTCCTGGTGTACGCCCGCCCGCCAAAGATACCGACCCCAAGGTACCTGTG
ATGGTTCTCGCCAGTCGACCTGCTCACTCCAAGAGCAGCAGCGCCCCTGG
AACCTGGACTGTCCTTCTCCCATGGAAGTGTGTGCTTCCTTTTTGGTACT
CGCTAATGTACTATCCTCTCTCGAGCGGCGGAAACCCGAGATTCGGCGGT
CTGAAAGAGCAGCAGCAACTCTCATTCGAGTCAGGAGAGCCTTGGTTCCC
GGGAGACTTTCCAGGAACCCGCGCTGGCTGGGAATGGGGCCTGCGTGAGC
GAGAAGAAGCGAAGCGCGACTGGGAGCGACGCCCCAAGGGACGCAGAACC
GAGTTCGAGAGCGTCGACCTGCGGAATGGTCAAAAGGGCGAGATAGGACG
CGGCTGGGCCTGCGACTGGGAAAGACTCATTCAGGGAGCACCAGAGACGA
GCAGTACAACAGACAAGGAACAACCCGAAATCAAAGCCGACGACACCACC
AGCCCTCAAGACAACAACACCAATGCCATCCACCCACCACTGAATATCCA
CCAACTCTCAACATCTGAAGCAGCACGCGCCCTAACCGACGCCTCAAACA
CCCCCATCAACACCTCAGCCCTAGCAACTGTCAAACTTACCCTCCTCAAC
CGCGGCACACCCACACCCCGAGCCCGCATCTACCGACTCCCTACCACCGA
TCCCGAGCTCCGCCAGAATTGGCTCTCGCTGTCATCAAACAATTCCAACG
ATAATCTTAGGGATCAGCTGAAGAAGAAACAATCTCCTCGCGCCGCCCCT
CTCGGCGAAGAAGATGTCCGGCAACAGCTCGCTGCATCGCTTATCACCCC
GTCTGCGGATGATGATGTCCGTCAAAATCACTTGCCGGTTCCAACTGAGG
AAGATCTCATTGGCTTCGTCACGACGGGCAATTACAACCTTGCGGAAGGA
AAGGGTACGGGTATTGGATCTGTTCTGTTGTCGAAGGTGGGGAAGGGGAA
AGCGAGTGGCAGGAATATGTGTATTATAAGGAGTGCGGGGGAGACCGTGG
CGAGGGTGGGATTTTGGGAGTTGGTTTGAATGGCCTCCCATCCTGCGAAG
CGCAAACCTGCTGCTCCCAACAACAATTTCTCCGCCGCCGCCGCCCGCAA
ACGCCAAAAAACATTTGATGCGCGCTCGCTCGCCGTGCAGGCCGCCGACG
CGGCACTATCTGCCTCCGGCGAACTAGATGTCGCTGCGTACGTGGAAGCA
AGGGAATACGAGATCCGATCGCTCGAGTCGGGGATCCAGCGATCGAAGAA
TGCGTTGACGAGTCGGGCGTTCCAGAAGGTGCCGAGGTCTTTGAGGAGAC
GGACTGCGAGTCATAATGTGAAGAGGGTACCGAAGAGATTGAGGGCGAGG
GCGAAAAGAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0001682tRNA 5'-leader removal
Vocabulary: Cellular Component
TermDefinition
GO:0000172ribonuclease MRP complex
GO:0005655nucleolar ribonuclease P complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009516ATCC10864_009516Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009516-T1ATCC10864_009516-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009516-T1.cdsATCC10864_009516-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009516-T1.exon2ATCC10864_009516-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009516-T1.exon1ATCC10864_009516-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF06978
PFAMPF08170
InterProIPR039182
InterProIPR012590
InterProIPR009723
Properties
Property NameValue
NoteBUSCO:EOG09260TPT
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000210supercontigMCQH01000210:543961..546673 -
Powered by Drupal