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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000215:30434..31452+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_009542-T1 ID=ATCC10864_009542-T1|Name=ATCC10864_009542-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1019bp|location=Sequence derived from alignment at MCQH01000215:30434..31452+ (Aspergillus niger ATCC 10864)
ATGGTTGTGGCAACAATTAAGTGCGTTGTTCTCATCATCTTTATCCCTTT
CTCTCCGCAATCACCTTTCCCCCTCCTCTCTTTCCCCTCCCCCCATTTGA
ATACACCCCCCCTCTATCCTGTCCCTTCCTTCCCCTTTCTCCGTGCAAAC
CGAACTCATTCATTCATTCTTTCTTTCTTTCTTGGAGCGGCAGGTTGCTA
ACCATAGTTTGACTTTTGTCGCAGATGCGTTGTCGTCGGTGACGGTGCCG
TTGGCAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCC
GAATATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATGTAAGT
TAGGGATCTCCTATCATTGAACACGATTTACATATCGGGACTCTGTCGGA
GTGCGCTATATCACACTGCCAATAGCGTTATTGGTGCAACCCAATGTCGC
TGGCTCGACGAATGCGATGGCGTCTGTGGACAAATATCGGAATCTGGAAC
TGACTCGAATCCGTTGCGCAATAGGATTGGCGATGAGCCCTACACTCTGG
GATTGTTTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTT
TCGTATCCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCC
TGCCTCCTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACC
ACTGCCCCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGC
GACGATCCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGAT
TCGCAAAGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAAT
ACGTGGAGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGAC
GAGGTTAGTGTCGCGCCACATCCCGCGTCGTCGCATCTACTCACACATGT
CGATTCTAGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAA
GAAGTGCGTCCTGCTGTAA back to topCoding sequence (CDS) from alignment at MCQH01000215:30434..31452+ >ATCC10864_009542-T1 ID=ATCC10864_009542-T1|Name=ATCC10864_009542-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2712bp|location=Sequence derived from alignment at MCQH01000215:30434..31452+ (Aspergillus niger ATCC 10864)
ATGGTTGTGGCAACAATTAAATGCGTTGTCGTCGGTGACGGTGCCGTTGG
CAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCCGAAT
ATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATCGTTATTGGT
GCAACCCAATGTCGCTGGCTCGACGAATGCGATGGCGTCTGTGGACAAAT
ATCGGAATCTGGAACTGACTCGAATCCGTTGCGCAATAGGATTGGCGATG
AGCCCTACACTCTGGGATTGTTTGATACTGCTGGTCAGGAGGATTACGAT
CGTCTTCGTCCTCTTTCGTATCCTCAGACGGATGTCTTCCTCGTTTGCTT
TTCGGTCACTTCGCCTGCCTCCTTTGAGAACGTACGCGAAAAGTGGTTCC
CCGAGGTGCACCACCACTGCCCCGGTGTCCCCTGCCTGATCGTGGGCACC
CAAACCGATCTTCGCGACGATCCCGCTGTCCGCGAGAAGCTTGCCCGCCA
GAAGATGCAACCGATTCGCAAAGAAGATGGAGACCGTATGGCCAAGGAGC
TGGGCGCAGTGAAATACGTGGAGTGTTCTGCCCTCACGCAGTACAAGCTC
AAGGACGTCTTTGACGAGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAA
GAAGTCGAAGAAGTGCGTCCTGCTGTAAATGGTTGTGGCAACAATTAAAT
GCGTTGTCGTCGGTGACGGTGCCGTTGGCAAGACCTGCCTTTTGATCTCT
TACACGACGAACAAGTTCCCTTCCGAATATGTTCCCACGGTGTTTGATAA
CTATGCCGTCACAGTCATCGTTATTGGTGCAACCCAATGTCGCTGGCTCG
ACGAATGCGATGGCGTCTGTGGACAAATATCGGAATCTGGAACTGACTCG
AATCCGTTGCGCAATAGGATTGGCGATGAGCCCTACACTCTGGGATTGTT
TGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCGTATC
CTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCCTCC
TTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACTGCCC
CGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGACGATC
CCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCGCAAA
GAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACGTGGA
GTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAGGCGA
TTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAGTGCGTCCTG
CTGTAAATGGTTGTGGCAACAATTAAATGCGTTGTCGTCGGTGACGGTGC
CGTTGGCAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTT
CCGAATATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATCGTT
ATTGGTGCAACCCAATGTCGCTGGCTCGACGAATGCGATGGCGTCTGTGG
ACAAATATCGGAATCTGGAACTGACTCGAATCCGTTGCGCAATAGGATTG
GCGATGAGCCCTACACTCTGGGATTGTTTGATACTGCTGGTCAGGAGGAT
TACGATCGTCTTCGTCCTCTTTCGTATCCTCAGACGGATGTCTTCCTCGT
TTGCTTTTCGGTCACTTCGCCTGCCTCCTTTGAGAACGTACGCGAAAAGT
GGTTCCCCGAGGTGCACCACCACTGCCCCGGTGTCCCCTGCCTGATCGTG
GGCACCCAAACCGATCTTCGCGACGATCCCGCTGTCCGCGAGAAGCTTGC
CCGCCAGAAGATGCAACCGATTCGCAAAGAAGATGGAGACCGTATGGCCA
AGGAGCTGGGCGCAGTGAAATACGTGGAGTGTTCTGCCCTCACGCAGTAC
AAGCTCAAGGACGTCTTTGACGAGGCGATTGTTGCCGCGCTCGAGCCCGC
TCCTAAGAAGTCGAAGAAGTGCGTCCTGCTGTAAATGGTTGTGGCAACAA
TTAAATGCGTTGTCGTCGGTGACGGTGCCGTTGGCAAGACCTGCCTTTTG
ATCTCTTACACGACGAACAAGTTCCCTTCCGAATATGTTCCCACGGTGTT
TGATAACTATGCCGTCACAGTCATCGTTATTGGTGCAACCCAATGTCGCT
GGCTCGACGAATGCGATGGCGTCTGTGGACAAATATCGGAATCTGGAACT
GACTCGAATCCGTTGCGCAATAGGATTGGCGATGAGCCCTACACTCTGGG
ATTGTTTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTT
CGTATCCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCT
GCCTCCTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCA
CTGCCCCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCG
ACGATCCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATT
CGCAAAGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATA
CGTGGAGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACG
AGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAGTGC
GTCCTGCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR037874 |
| InterPro | IPR001806 |
| PFAM | PF08477 |
| InterPro | IPR003578 |
| InterPro | IPR005225 |
| InterPro | IPR027417 |
Properties
| Property Name | Value |
|---|
| Product | Rho GTPase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000215 | supercontig | MCQH01000215:30434..31452 + |
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