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ATCC10864_009613-T1, ATCC10864_009613-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009613-T1
Unique NameATCC10864_009613-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000216:28776..30687+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009613-T1 ID=ATCC10864_009613-T1|Name=ATCC10864_009613-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1912bp|location=Sequence derived from alignment at MCQH01000216:28776..30687+ (Aspergillus niger ATCC 10864)
ATGGCATCCATAGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATA
CACCGGCGAGGAGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGC
GGGTCGTAGGCCCGGGACAACTCGACGAAACACAGATTGTTCTCCGGGTT
GGTAGCACCGCTTCCATACATAATCCACAGAAATCTTAGCCCCCCTTTAC
CGTTTCAACTCAATGCCAATAATGCTAACGATGACTACGACGAATACAGA
GAACCGGGCCCCCTCCCTACCAGAACCGAGCCGGATGGCGGCCCCGCGCC
CCCGAAGACTTCGGCGATGGCGGCGCGTTCCCCGAGATTCTAGTCGCGCA
GTACCCGCTCGATATGGGCCGGAAGGGCACATCATCGACATCGAACGCCC
TAGCCGTGCAAGTCGACGCCGAGGGAAAAGTCAAATACGATGCTATCGCG
CGCCGCGGACACAGCGACAACCGGATCGTGCATGCCTCCTTTAAGGATCT
GATTCCGCTGCGCCAGCGCGTCGATATGGGCGAGGTGTCATTGGACCGGC
CGTCGGAGGAAGAAGTCCAGGCGCAGATGGAGAAGACAAAGAACGCGCTC
GCCAGCTTAGTGGAGGGTGCGGCGGCGGCGCAGAAGCCTAAGAATGTGAA
GGGCGGGCGGCGAGCGGAACCTACGTTTGTGAGGTATACGCCGGCTAATC
AGATGGGTGATACGTCGAAGAAGAATGATCGTATTATGAAGATCGTGGAG
AGACAGCAGGATCCCATGGAACCGCCTAAGTTCAAGCACAAGAAGATCCC
TCGCGGTCCGCCGTCGCCGCCTCCGCCGGTTATGCATTCGCCGCCGAGGA
AGCTCACGGCTGAGGATCAGGAAGCGTGGAGGATCCCGCCGCCTGTGTCG
AATTGGAAGAATCCTAAGGGTTACACGGTTCCGTTGGATAAGCGGTTGGC
GGCTGATGGACGCGGGCTGCAGGATGTGTCGATCAACGATAAGTTCGCGC
AGTTCGCGGAGGCGCTGTTTACGGCGGATCGGCACGCCAGAGAGGAGGTC
AGGCTGCGTGCTCAGATGCAGCAGAAGCTGGCGGAGAAGGAGAAGGCCCA
GAAGGAGGAGCATCTGCGCGCGTTGGCTCAGAAGGCCCGCGAGGAGCGTG
CAGCTGCTGGTAGCAGTCGGCGCGATTCTCGTGCCGGATCTCGCTCGCCG
TCGCGTAGCGTCAGCCGCAGCCCGTCGCCGTACTCGGCTAGTGAGGATGA
GGATGCTGCTCGGGAGCGGGAGCGCGCGCGTCGTGAGCGTCGTCAGGAGG
CGGAGAGACAACTCCGCCAGTCGCGGATGGGTACGGAGAGACGCATCCAG
ATGATGGCACGCGAGCAGAACCGGGATATTTCCGAGAAGGTGGCGCTGGG
ATTGGCCAAGCCGACGCAGGCATCCGAATCAATGTATGACTCGCGTCTGT
TCAATCAGACGAGCGGGATGGACTCGGGCTTCAACGAGGATAACCCGTAC
GACAAACCGCTGTTTGCCGCGCAGGAAGCCATTAACAGCATCTACCGTCC
ACGGGCGCAGGCGGATGACGATGACGGCGAAGGCGCCGAGGGCGAGATGA
GCAAGATCCAGAAACAGAACCGGTTCGAGGTGCTCGGTAGAGCGAAGGAA
GGGTTCCGCGGCGCTGACATAGCTGAGGTGAGTCTATGCGTCCTCTTACT
CCACCGTACTCAAGAAATATACGCTAACTGATCCCCACAATTAGGCTCGT
GATGGCCCCGTGCAATTCGAAAAAGATACCACTGACCCCTTCGGCATCGA
CAGCATGATCGCCGACGTCACTGGCTCCGGTGCAGGCCAAAAGCGCTATG
GTATCCAGGAAGTCGACCGTTCGGAACGGGGCTCCAAACGGGCGCGTGTC
GATGATGATTAA
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Coding sequence (CDS) from alignment at MCQH01000216:28776..30687+

>ATCC10864_009613-T1 ID=ATCC10864_009613-T1|Name=ATCC10864_009613-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5229bp|location=Sequence derived from alignment at MCQH01000216:28776..30687+ (Aspergillus niger ATCC 10864)
ATGGCATCCATAGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATA
CACCGGCGAGGAGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGC
GGGTCGTAGGCCCGGGACAACTCGACGAAACACAGATTGTTCTCCGGAGA
ACCGGGCCCCCTCCCTACCAGAACCGAGCCGGATGGCGGCCCCGCGCCCC
CGAAGACTTCGGCGATGGCGGCGCGTTCCCCGAGATTCTAGTCGCGCAGT
ACCCGCTCGATATGGGCCGGAAGGGCACATCATCGACATCGAACGCCCTA
GCCGTGCAAGTCGACGCCGAGGGAAAAGTCAAATACGATGCTATCGCGCG
CCGCGGACACAGCGACAACCGGATCGTGCATGCCTCCTTTAAGGATCTGA
TTCCGCTGCGCCAGCGCGTCGATATGGGCGAGGTGTCATTGGACCGGCCG
TCGGAGGAAGAAGTCCAGGCGCAGATGGAGAAGACAAAGAACGCGCTCGC
CAGCTTAGTGGAGGGTGCGGCGGCGGCGCAGAAGCCTAAGAATGTGAAGG
GCGGGCGGCGAGCGGAACCTACGTTTGTGAGGTATACGCCGGCTAATCAG
ATGGGTGATACGTCGAAGAAGAATGATCGTATTATGAAGATCGTGGAGAG
ACAGCAGGATCCCATGGAACCGCCTAAGTTCAAGCACAAGAAGATCCCTC
GCGGTCCGCCGTCGCCGCCTCCGCCGGTTATGCATTCGCCGCCGAGGAAG
CTCACGGCTGAGGATCAGGAAGCGTGGAGGATCCCGCCGCCTGTGTCGAA
TTGGAAGAATCCTAAGGGTTACACGGTTCCGTTGGATAAGCGGTTGGCGG
CTGATGGACGCGGGCTGCAGGATGTGTCGATCAACGATAAGTTCGCGCAG
TTCGCGGAGGCGCTGTTTACGGCGGATCGGCACGCCAGAGAGGAGGTCAG
GCTGCGTGCTCAGATGCAGCAGAAGCTGGCGGAGAAGGAGAAGGCCCAGA
AGGAGGAGCATCTGCGCGCGTTGGCTCAGAAGGCCCGCGAGGAGCGTGCA
GCTGCTGGTAGCAGTCGGCGCGATTCTCGTGCCGGATCTCGCTCGCCGTC
GCGTAGCGTCAGCCGCAGCCCGTCGCCGTACTCGGCTAGTGAGGATGAGG
ATGCTGCTCGGGAGCGGGAGCGCGCGCGTCGTGAGCGTCGTCAGGAGGCG
GAGAGACAACTCCGCCAGTCGCGGATGGGTACGGAGAGACGCATCCAGAT
GATGGCACGCGAGCAGAACCGGGATATTTCCGAGAAGGTGGCGCTGGGAT
TGGCCAAGCCGACGCAGGCATCCGAATCAATGTATGACTCGCGTCTGTTC
AATCAGACGAGCGGGATGGACTCGGGCTTCAACGAGGATAACCCGTACGA
CAAACCGCTGTTTGCCGCGCAGGAAGCCATTAACAGCATCTACCGTCCAC
GGGCGCAGGCGGATGACGATGACGGCGAAGGCGCCGAGGGCGAGATGAGC
AAGATCCAGAAACAGAACCGGTTCGAGGTGCTCGGTAGAGCGAAGGAAGG
GTTCCGCGGCGCTGACATAGCTGAGGCTCGTGATGGCCCCGTGCAATTCG
AAAAAGATACCACTGACCCCTTCGGCATCGACAGCATGATCGCCGACGTC
ACTGGCTCCGGTGCAGGCCAAAAGCGCTATGGTATCCAGGAAGTCGACCG
TTCGGAACGGGGCTCCAAACGGGCGCGTGTCGATGATGATTAAATGGCAT
CCATAGCGGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATACACCGGC
GAGGAGGAAGAGCTACCACAACATGCACAACCCCGAGGTCCGCGGGTCGT
AGGCCCGGGACAACTCGACGAAACACAGATTGTTCTCCGGAGAACCGGGC
CCCCTCCCTACCAGAACCGAGCCGGATGGCGGCCCCGCGCCCCCGAAGAC
TTCGGCGATGGCGGCGCGTTCCCCGAGATTCTAGTCGCGCAGTACCCGCT
CGATATGGGCCGGAAGGGCACATCATCGACATCGAACGCCCTAGCCGTGC
AAGTCGACGCCGAGGGAAAAGTCAAATACGATGCTATCGCGCGCCGCGGA
CACAGCGACAACCGGATCGTGCATGCCTCCTTTAAGGATCTGATTCCGCT
GCGCCAGCGCGTCGATATGGGCGAGGTGTCATTGGACCGGCCGTCGGAGG
AAGAAGTCCAGGCGCAGATGGAGAAGACAAAGAACGCGCTCGCCAGCTTA
GTGGAGGGTGCGGCGGCGGCGCAGAAGCCTAAGAATGTGAAGGGCGGGCG
GCGAGCGGAACCTACGTTTGTGAGGTATACGCCGGCTAATCAGATGGGTG
ATACGTCGAAGAAGAATGATCGTATTATGAAGATCGTGGAGAGACAGCAG
GATCCCATGGAACCGCCTAAGTTCAAGCACAAGAAGATCCCTCGCGGTCC
GCCGTCGCCGCCTCCGCCGGTTATGCATTCGCCGCCGAGGAAGCTCACGG
CTGAGGATCAGGAAGCGTGGAGGATCCCGCCGCCTGTGTCGAATTGGAAG
AATCCTAAGGGTTACACGGTTCCGTTGGATAAGCGGTTGGCGGCTGATGG
ACGCGGGCTGCAGGATGTGTCGATCAACGATAAGTTCGCGCAGTTCGCGG
AGGCGCTGTTTACGGCGGATCGGCACGCCAGAGAGGAGGTCAGGCTGCGT
GCTCAGATGCAGCAGAAGCTGGCGGAGAAGGAGAAGGCCCAGAAGGAGGA
GCATCTGCGCGCGTTGGCTCAGAAGGCCCGCGAGGAGCGTGCAGCTGCTG
GTAGCAGTCGGCGCGATTCTCGTGCCGGATCTCGCTCGCCGTCGCGTAGC
GTCAGCCGCAGCCCGTCGCCGTACTCGGCTAGTGAGGATGAGGATGCTGC
TCGGGAGCGGGAGCGCGCGCGTCGTGAGCGTCGTCAGGAGGCGGAGAGAC
AACTCCGCCAGTCGCGGATGGGTACGGAGAGACGCATCCAGATGATGGCA
CGCGAGCAGAACCGGGATATTTCCGAGAAGGTGGCGCTGGGATTGGCCAA
GCCGACGCAGGCATCCGAATCAATGTATGACTCGCGTCTGTTCAATCAGA
CGAGCGGGATGGACTCGGGCTTCAACGAGGATAACCCGTACGACAAACCG
CTGTTTGCCGCGCAGGAAGCCATTAACAGCATCTACCGTCCACGGGCGCA
GGCGGATGACGATGACGGCGAAGGCGCCGAGGGCGAGATGAGCAAGATCC
AGAAACAGAACCGGTTCGAGGTGCTCGGTAGAGCGAAGGAAGGGTTCCGC
GGCGCTGACATAGCTGAGGCTCGTGATGGCCCCGTGCAATTCGAAAAAGA
TACCACTGACCCCTTCGGCATCGACAGCATGATCGCCGACGTCACTGGCT
CCGGTGCAGGCCAAAAGCGCTATGGTATCCAGGAAGTCGACCGTTCGGAA
CGGGGCTCCAAACGGGCGCGTGTCGATGATGATTAAATGGCATCCATAGC
GGAGGGCCTATTCAAGTCTCTTCCCAAGCCGAAATACACCGGCGAGGAGG
AAGAGCTACCACAACATGCACAACCCCGAGGTCCGCGGGTCGTAGGCCCG
GGACAACTCGACGAAACACAGATTGTTCTCCGGAGAACCGGGCCCCCTCC
CTACCAGAACCGAGCCGGATGGCGGCCCCGCGCCCCCGAAGACTTCGGCG
ATGGCGGCGCGTTCCCCGAGATTCTAGTCGCGCAGTACCCGCTCGATATG
GGCCGGAAGGGCACATCATCGACATCGAACGCCCTAGCCGTGCAAGTCGA
CGCCGAGGGAAAAGTCAAATACGATGCTATCGCGCGCCGCGGACACAGCG
ACAACCGGATCGTGCATGCCTCCTTTAAGGATCTGATTCCGCTGCGCCAG
CGCGTCGATATGGGCGAGGTGTCATTGGACCGGCCGTCGGAGGAAGAAGT
CCAGGCGCAGATGGAGAAGACAAAGAACGCGCTCGCCAGCTTAGTGGAGG
GTGCGGCGGCGGCGCAGAAGCCTAAGAATGTGAAGGGCGGGCGGCGAGCG
GAACCTACGTTTGTGAGGTATACGCCGGCTAATCAGATGGGTGATACGTC
GAAGAAGAATGATCGTATTATGAAGATCGTGGAGAGACAGCAGGATCCCA
TGGAACCGCCTAAGTTCAAGCACAAGAAGATCCCTCGCGGTCCGCCGTCG
CCGCCTCCGCCGGTTATGCATTCGCCGCCGAGGAAGCTCACGGCTGAGGA
TCAGGAAGCGTGGAGGATCCCGCCGCCTGTGTCGAATTGGAAGAATCCTA
AGGGTTACACGGTTCCGTTGGATAAGCGGTTGGCGGCTGATGGACGCGGG
CTGCAGGATGTGTCGATCAACGATAAGTTCGCGCAGTTCGCGGAGGCGCT
GTTTACGGCGGATCGGCACGCCAGAGAGGAGGTCAGGCTGCGTGCTCAGA
TGCAGCAGAAGCTGGCGGAGAAGGAGAAGGCCCAGAAGGAGGAGCATCTG
CGCGCGTTGGCTCAGAAGGCCCGCGAGGAGCGTGCAGCTGCTGGTAGCAG
TCGGCGCGATTCTCGTGCCGGATCTCGCTCGCCGTCGCGTAGCGTCAGCC
GCAGCCCGTCGCCGTACTCGGCTAGTGAGGATGAGGATGCTGCTCGGGAG
CGGGAGCGCGCGCGTCGTGAGCGTCGTCAGGAGGCGGAGAGACAACTCCG
CCAGTCGCGGATGGGTACGGAGAGACGCATCCAGATGATGGCACGCGAGC
AGAACCGGGATATTTCCGAGAAGGTGGCGCTGGGATTGGCCAAGCCGACG
CAGGCATCCGAATCAATGTATGACTCGCGTCTGTTCAATCAGACGAGCGG
GATGGACTCGGGCTTCAACGAGGATAACCCGTACGACAAACCGCTGTTTG
CCGCGCAGGAAGCCATTAACAGCATCTACCGTCCACGGGCGCAGGCGGAT
GACGATGACGGCGAAGGCGCCGAGGGCGAGATGAGCAAGATCCAGAAACA
GAACCGGTTCGAGGTGCTCGGTAGAGCGAAGGAAGGGTTCCGCGGCGCTG
ACATAGCTGAGGCTCGTGATGGCCCCGTGCAATTCGAAAAAGATACCACT
GACCCCTTCGGCATCGACAGCATGATCGCCGACGTCACTGGCTCCGGTGC
AGGCCAAAAGCGCTATGGTATCCAGGAAGTCGACCGTTCGGAACGGGGCT
CCAAACGGGCGCGTGTCGATGATGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRP45ATCC10864_009613Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009613-T1.exon1ATCC10864_009613-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009613-T1.exon2ATCC10864_009613-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009613-T1.exon3ATCC10864_009613-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009613-T1.cdsATCC10864_009613-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009613-T1ATCC10864_009613-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004015
PFAMPF02731
InterProIPR017862
Properties
Property NameValue
NoteBUSCO:EOG09264DT4
ProductmRNA splicing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000216supercontigMCQH01000216:28776..30687 +
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