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ATCC10864_009628-T1, ATCC10864_009628-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009628-T1
Unique NameATCC10864_009628-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000216:82897..84112+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009628-T1 ID=ATCC10864_009628-T1|Name=ATCC10864_009628-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1216bp|location=Sequence derived from alignment at MCQH01000216:82897..84112+ (Aspergillus niger ATCC 10864)
ATGGATAACGCAAACCTCTGGACTCGCCGATCCAAGTACGTCCCACTCCG
ACACGATGACTTTGCCCGCATGCTTGTGTGGCTGATGCGACTCAACTAAC
CTGTTTAATCTTTTGTTCCTATCTATAGCACCTCCAAGTTGTCTCTGTCT
ATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCACCAAGCG
TTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTCAACGCCC
TCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGCCTCCTCT
GCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCCCCAAAAC
CCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGTGAAAACC
CTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGGCGCTGCC
TTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCTGGTACCG
GCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTACCGCTCCGCTTG
CATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCACCTAAAG
AGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATCTTCAAAAAGGG
CATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGAAAATGGG
TGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGATCTCCTC
CTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGGTTTGTGG
TGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTGTGGACCC
GCATCGATGGCGGGCGGAACATCAAGATCAGGTATGTCATACGTGGACAC
ATCCCGTTGGAAGTGACATCGCAAGTTTACTAACGTGTTCTGCAGAGAGA
CAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCTGGAAG
AGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCTCGCCA
GGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCACCATCACCATC
ACCACCACAACAACAACAACAACAACCACAATCACAACCAGCAAAACCAG
CTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAAGGAAA
AGGCACGACATCTTGA
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Coding sequence (CDS) from alignment at MCQH01000216:82897..84112+

>ATCC10864_009628-T1 ID=ATCC10864_009628-T1|Name=ATCC10864_009628-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3177bp|location=Sequence derived from alignment at MCQH01000216:82897..84112+ (Aspergillus niger ATCC 10864)
ATGGATAACGCAAACCTCTGGACTCGCCGATCCAACACCTCCAAGTTGTC
TCTGTCTATGACGGGGACGGACGGCGCTCGAGTTGAACTTCCCCGCGCCA
CCAAGCGTTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCCAACCCTTTC
AACGCCCTCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTCTACAAACGC
CTCCTCTGCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGTTTGGAACCC
CCAAAACCCCCGGTGCACCTTCCGACCTGAAAACTCCCGGCGAGAAGCGT
GAAAACCCTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAAACCTAAGGG
CGCTGCCTTGACGCTCAAGGAGCACCCGCTCAAGTCCACTTGGATTATCT
GGTACCGGCCTCCCACACCTAAATACTCCGATTACGAAAAGTCTACCGCT
CCGCTTGCATCCATATCATCAGTAGAGAGTTTCTGGTCGATCTATTCGCA
CCTAAAGAGGCCCTCTCTGCTCCCCACAGTCTCCGACTACCATATCTTCA
AAAAGGGCATCCGTCCGGTATGGGAGGACGAGGCCAATAAGAGAGGTGGA
AAATGGGTGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTACTGGGAGGA
TCTCCTCCTGGCTATGATCGGTGACCAGTTTGCAGAGGCTAGTGATGAGG
TTTGTGGTGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTTCTGAATGTG
TGGACCCGCATCGATGGCGGGCGGAACATCAAGATCAGAGAGACAATCAA
ACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCTGGAAGAGTCATG
ACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCTCGCCAGGAGAAG
GCCGCCGGAAACGCCGGTCATCACCACCATCACCATCACCATCACCACCA
CAACAACAACAACAACAACCACAATCACAACCAGCAAAACCAGCTGGGCG
ATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAAGGAAAAGGCACG
ACATCTTGAATGGATAACGCAAACCTCTGGACTCGCCGATCCAACACCTC
CAAGTTGTCTCTGTCTATGACGGGGACGGACGGCGCTCGAGTTGAACTTC
CCCGCGCCACCAAGCGTTTCGGCCCCGACAGCTCCCACGGCGGCCGGTCC
AACCCTTTCAACGCCCTCTCCCCCCTCTCCGGCGGCGTGTCCTCTCCGTC
TACAAACGCCTCCTCTGCATTCGGCCTGGGCTCCGGTGCCTTTGCGTCGT
TTGGAACCCCCAAAACCCCCGGTGCACCTTCCGACCTGAAAACTCCCGGC
GAGAAGCGTGAAAACCCTGTCGACCAGGTTTCCGCTGCTGAGGCCGGCAA
ACCTAAGGGCGCTGCCTTGACGCTCAAGGAGCACCCGCTCAAGTCCACTT
GGATTATCTGGTACCGGCCTCCCACACCTAAATACTCCGATTACGAAAAG
TCTACCGCTCCGCTTGCATCCATATCATCAGTAGAGAGTTTCTGGTCGAT
CTATTCGCACCTAAAGAGGCCCTCTCTGCTCCCCACAGTCTCCGACTACC
ATATCTTCAAAAAGGGCATCCGTCCGGTATGGGAGGACGAGGCCAATAAG
AGAGGTGGAAAATGGGTGGTGAGGCTGAAGAAGGGGGTTGCGGATCGCTA
CTGGGAGGATCTCCTCCTGGCTATGATCGGTGACCAGTTTGCAGAGGCTA
GTGATGAGGTTTGTGGTGCGGTGCTCAGTGTGCGGAGCGGGGAGGATGTT
CTGAATGTGTGGACCCGCATCGATGGCGGGCGGAACATCAAGATCAGAGA
GACAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATATCGTCTGGA
AGAGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGACCAGGCTCGC
CAGGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCACCATCACCA
TCACCACCACAACAACAACAACAACAACCACAATCACAACCAGCAAAACC
AGCTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGGGATAAAGGA
AAAGGCACGACATCTTGAATGGATAACGCAAACCTCTGGACTCGCCGATC
CAACACCTCCAAGTTGTCTCTGTCTATGACGGGGACGGACGGCGCTCGAG
TTGAACTTCCCCGCGCCACCAAGCGTTTCGGCCCCGACAGCTCCCACGGC
GGCCGGTCCAACCCTTTCAACGCCCTCTCCCCCCTCTCCGGCGGCGTGTC
CTCTCCGTCTACAAACGCCTCCTCTGCATTCGGCCTGGGCTCCGGTGCCT
TTGCGTCGTTTGGAACCCCCAAAACCCCCGGTGCACCTTCCGACCTGAAA
ACTCCCGGCGAGAAGCGTGAAAACCCTGTCGACCAGGTTTCCGCTGCTGA
GGCCGGCAAACCTAAGGGCGCTGCCTTGACGCTCAAGGAGCACCCGCTCA
AGTCCACTTGGATTATCTGGTACCGGCCTCCCACACCTAAATACTCCGAT
TACGAAAAGTCTACCGCTCCGCTTGCATCCATATCATCAGTAGAGAGTTT
CTGGTCGATCTATTCGCACCTAAAGAGGCCCTCTCTGCTCCCCACAGTCT
CCGACTACCATATCTTCAAAAAGGGCATCCGTCCGGTATGGGAGGACGAG
GCCAATAAGAGAGGTGGAAAATGGGTGGTGAGGCTGAAGAAGGGGGTTGC
GGATCGCTACTGGGAGGATCTCCTCCTGGCTATGATCGGTGACCAGTTTG
CAGAGGCTAGTGATGAGGTTTGTGGTGCGGTGCTCAGTGTGCGGAGCGGG
GAGGATGTTCTGAATGTGTGGACCCGCATCGATGGCGGGCGGAACATCAA
GATCAGAGAGACAATCAAACGTCTGCTGAACTTCCCGGCCGACACCAATA
TCGTCTGGAAGAGTCATGACGACAGTATCGCCCAACGTTCGGCCATCGAC
CAGGCTCGCCAGGAGAAGGCCGCCGGAAACGCCGGTCATCACCACCATCA
CCATCACCATCACCACCACAACAACAACAACAACAACCACAATCACAACC
AGCAAAACCAGCTGGGCGATCGACGAAGAGTTACGGCGAATGACGAGGGG
GATAAAGGAAAAGGCACGACATCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009628ATCC10864_009628Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009628-T1.exon1ATCC10864_009628-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009628-T1.exon2ATCC10864_009628-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009628-T1.exon3ATCC10864_009628-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009628-T1.cdsATCC10864_009628-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009628-T1ATCC10864_009628-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001040
InterProIPR023398
InterProIPR019770
PFAMPF01652
Properties
Property NameValue
NoteantiSMASH:Cluster_1000216.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000216supercontigMCQH01000216:82897..84112 +
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