You are here

Home

ATCC10864_009637-T1, ATCC10864_009637-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009637-T1
Unique NameATCC10864_009637-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000216:108012..108816+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009637-T1 ID=ATCC10864_009637-T1|Name=ATCC10864_009637-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=805bp|location=Sequence derived from alignment at MCQH01000216:108012..108816+ (Aspergillus niger ATCC 10864)
ATGCTCCTCAAAATCCTCACATTAACCACCACCCTAACCACCCTCCTAAC
ACAAACAACCTGCATCCCCCTCTCCCCATCCTCATCCTCACCCTCCTCCC
CATCCTCCTCATCAACTCCCTCTTCAACCCTCGACACCCCCGACGGCCTC
TCCTCCGCCATCGCCCAAATCATCGTCGACGAAACCATCGCCGACTCCAA
CAACTCCACCTGTCCCCCGTCCAACCGCTCCAAACAATGCTGTGAATCCA
TCAACGATATCGCGTCCCAGATCACTCAGCCTTTGGGGATGTTGATTCCA
TGGATCGGGGGCGTTGATATTAGTTCCGTTTTGGGGTTGGATTGTATGTT
CCTTTCCTTTCCCTTTTTCCTATTCTCCCTTCGGGGTGTAAGTTGTGTTT
GTGGGGGTGGATTGGCTAATGATGATGGTAATGGGTACAGGTACAGGAAT
GAGCGACGATACGCCGAATGATCAATGCTCGCATCAGGTTATGTGTTGTG
ATGGGCAGCCGAATGTATGTCCTTCCCATTTCCGGTATTTCTTTGTGGGA
TTGGTTTGGGGAGGGGAAAGTATGGTATGGTATGTGATGTGAAGCTAATG
GTGTCGGTGACAGTCCGAAGGATCTTCCCAGCCCATTTCGTCGGCTTGCA
AACCGTTCGACGATGCGATCAAGGATAAGAATGATGCTATTAATGATAGT
AAGCAGAGGGAGAGCATGTTGGTGGCGCAGGCTTCGGCTTCGGCTTCTGC
GTCGGCGTCGGCGTCGGCATCTGCCAGTGCTTCTGCCAGTGCGGGTGCTA
GCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000216:108012..108816+

>ATCC10864_009637-T1 ID=ATCC10864_009637-T1|Name=ATCC10864_009637-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1827bp|location=Sequence derived from alignment at MCQH01000216:108012..108816+ (Aspergillus niger ATCC 10864)
ATGCTCCTCAAAATCCTCACATTAACCACCACCCTAACCACCCTCCTAAC
ACAAACAACCTGCATCCCCCTCTCCCCATCCTCATCCTCACCCTCCTCCC
CATCCTCCTCATCAACTCCCTCTTCAACCCTCGACACCCCCGACGGCCTC
TCCTCCGCCATCGCCCAAATCATCGTCGACGAAACCATCGCCGACTCCAA
CAACTCCACCTGTCCCCCGTCCAACCGCTCCAAACAATGCTGTGAATCCA
TCAACGATATCGCGTCCCAGATCACTCAGCCTTTGGGGATGTTGATTCCA
TGGATCGGGGGCGTTGATATTAGTTCCGTTTTGGGGTTGGATTGTACAGG
AATGAGCGACGATACGCCGAATGATCAATGCTCGCATCAGGTTATGTGTT
GTGATGGGCAGCCGAATTCCGAAGGATCTTCCCAGCCCATTTCGTCGGCT
TGCAAACCGTTCGACGATGCGATCAAGGATAAGAATGATGCTATTAATGA
TAGTAAGCAGAGGGAGAGCATGTTGGTGGCGCAGGCTTCGGCTTCGGCTT
CTGCGTCGGCGTCGGCGTCGGCATCTGCCAGTGCTTCTGCCAGTGCGGGT
GCTAGCTAGATGCTCCTCAAAATCCTCACATTAACCACCACCCTAACCAC
CCTCCTAACACAAACAACCTGCATCCCCCTCTCCCCATCCTCATCCTCAC
CCTCCTCCCCATCCTCCTCATCAACTCCCTCTTCAACCCTCGACACCCCC
GACGGCCTCTCCTCCGCCATCGCCCAAATCATCGTCGACGAAACCATCGC
CGACTCCAACAACTCCACCTGTCCCCCGTCCAACCGCTCCAAACAATGCT
GTGAATCCATCAACGATATCGCGTCCCAGATCACTCAGCCTTTGGGGATG
TTGATTCCATGGATCGGGGGCGTTGATATTAGTTCCGTTTTGGGGTTGGA
TTGTACAGGAATGAGCGACGATACGCCGAATGATCAATGCTCGCATCAGG
TTATGTGTTGTGATGGGCAGCCGAATTCCGAAGGATCTTCCCAGCCCATT
TCGTCGGCTTGCAAACCGTTCGACGATGCGATCAAGGATAAGAATGATGC
TATTAATGATAGTAAGCAGAGGGAGAGCATGTTGGTGGCGCAGGCTTCGG
CTTCGGCTTCTGCGTCGGCGTCGGCGTCGGCATCTGCCAGTGCTTCTGCC
AGTGCGGGTGCTAGCTAGATGCTCCTCAAAATCCTCACATTAACCACCAC
CCTAACCACCCTCCTAACACAAACAACCTGCATCCCCCTCTCCCCATCCT
CATCCTCACCCTCCTCCCCATCCTCCTCATCAACTCCCTCTTCAACCCTC
GACACCCCCGACGGCCTCTCCTCCGCCATCGCCCAAATCATCGTCGACGA
AACCATCGCCGACTCCAACAACTCCACCTGTCCCCCGTCCAACCGCTCCA
AACAATGCTGTGAATCCATCAACGATATCGCGTCCCAGATCACTCAGCCT
TTGGGGATGTTGATTCCATGGATCGGGGGCGTTGATATTAGTTCCGTTTT
GGGGTTGGATTGTACAGGAATGAGCGACGATACGCCGAATGATCAATGCT
CGCATCAGGTTATGTGTTGTGATGGGCAGCCGAATTCCGAAGGATCTTCC
CAGCCCATTTCGTCGGCTTGCAAACCGTTCGACGATGCGATCAAGGATAA
GAATGATGCTATTAATGATAGTAAGCAGAGGGAGAGCATGTTGGTGGCGC
AGGCTTCGGCTTCGGCTTCTGCGTCGGCGTCGGCGTCGGCATCTGCCAGT
GCTTCTGCCAGTGCGGGTGCTAGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005199structural constituent of cell wall
Vocabulary: Cellular Component
TermDefinition
GO:0009277fungal-type cell wall
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009637ATCC10864_009637Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009637-T1.exon1ATCC10864_009637-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009637-T1.exon2ATCC10864_009637-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009637-T1.exon3ATCC10864_009637-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009637-T1.cdsATCC10864_009637-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009637-T1ATCC10864_009637-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001338
PFAMPF01185
Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000216supercontigMCQH01000216:108012..108816 +
Powered by Drupal