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ATCC10864_009678-T1, ATCC10864_009678-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009678-T1
Unique NameATCC10864_009678-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:128900..129653-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009678-T1 ID=ATCC10864_009678-T1|Name=ATCC10864_009678-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=754bp|location=Sequence derived from alignment at MCQH01000217:128900..129653- (Aspergillus niger ATCC 10864)
ATGTCTGACTACGGAGACCACGACGCTGAGGAAACGTAAGAGACCGGTAC
CCCATGAGAGCTTGAGCTTGCGCAGGTCAATGCTGCGCGTCTGCGTTACA
TATCGATGGCCGTCATTTTTGCTAGGTGGAAATTCCGATGTTCTGACTAG
GATTGTCTTATAGTTACGACTACGAGCCGGAGCAGGAGTACGATGACAAC
GAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGG
AGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACC
ACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATG
GAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCC
ATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGC
AGATCAGGTTCGTCTCGGCAATCGATGCAGCATCAAGCATGGGCTGAGGA
GCGCAATCGGATGCTGACCATGTTTTTAGTATGAACGCCCCGGTGCTCGT
CGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGA
ACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGG
TAAGCGGACCTTCTCCATGTGTGTTTAACGATTTGACGTATTCGATCTAA
TCACTATTTCTGTGGTACAGGTACGAGGACTGGACTTGCGAAGAATTACT
CTAG
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Coding sequence (CDS) from alignment at MCQH01000217:128900..129653-

>ATCC10864_009678-T1 ID=ATCC10864_009678-T1|Name=ATCC10864_009678-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1932bp|location=Sequence derived from alignment at MCQH01000217:128900..129653- (Aspergillus niger ATCC 10864)
GTACGAGGACTGGACTTGCGAAGAATTACTCTAGTATGAACGCCCCGGTG
CTCGTCGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGA
GTTGAACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACG
GATGTTACGACTACGAGCCGGAGCAGGAGTACGATGACAACGAGCCCGAG
GACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGGAGCCGATGA
ATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACCACATTGTCG
CTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATGGAACAGACA
CGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCCATACATGAC
CAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGCAGATCAGAT
GTCTGACTACGGAGACCACGACGCTGAGGAAACGTACGAGGACTGGACTT
GCGAAGAATTACTCTAGTATGAACGCCCCGGTGCTCGTCGATCTTGAGGG
CGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGAACCAGAAGAAGA
TCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGTTACGACTACGAG
CCGGAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTTAAACCCCGA
GGATGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCGAAGGCTCAT
ACGCGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGCGACCCGAAT
GCGGGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAAGAAGGTCCC
GAACGACCAGCGCCAGACAACTCCATACATGACCAAGTACGAGCGCGCGC
GTGTCCTGGGTACTCGGGCGCTGCAGATCAGATGTCTGACTACGGAGACC
ACGACGCTGAGGAAACGTACGAGGACTGGACTTGCGAAGAATTACTCTAG
TATGAACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGACGGATCCTCTAC
AGATCGCCATCAAGGAGTTGAACCAGAAGAAGATCCCACTGATTGTGCGG
AGATATCTTCCCGACGGATGTTACGACTACGAGCCGGAGCAGGAGTACGA
TGACAACGAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAG
AAGGAGGAGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAAC
GGAAACCACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAA
GGTCATGGAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGA
CAACTCCATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGG
GCGCTGCAGATCAGATGTCTGACTACGGAGACCACGACGCTGAGGAAACG
TACGAGGACTGGACTTGCGAAGAATTACTCTAGTATGAACGCCCCGGTGC
TCGTCGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAG
TTGAACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGG
ATGTTACGACTACGAGCCGGAGCAGGAGTACGATGACAACGAGCCCGAGG
ACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGGAGCCGATGAA
TATGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACCACATTGTCGC
TTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATGGAACAGACAC
GGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCCATACATGACC
AAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGCAGATCAGATG
TCTGACTACGGAGACCACGACGCTGAGGAAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005665RNA polymerase II, core complex
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPO26ATCC10864_009678Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009678-T1ATCC10864_009678-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009678-T1.cdsATCC10864_009678-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009678-T1.exon4ATCC10864_009678-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009678-T1.exon3ATCC10864_009678-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009678-T1.exon2ATCC10864_009678-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009678-T1.exon1ATCC10864_009678-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01192
InterProIPR036161
InterProIPR006110
InterProIPR028363
InterProIPR006111
InterProIPR012293
InterProIPR020708
Properties
Property NameValue
NoteBUSCO:EOG09265552
Product and III
Product II
Productsubunit common to RNA polymerases I
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:128900..129653 -
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