You are here

Home

ATCC10864_009699-T1, ATCC10864_009699-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009699-T1
Unique NameATCC10864_009699-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:191861..193120-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009699-T1 ID=ATCC10864_009699-T1|Name=ATCC10864_009699-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1260bp|location=Sequence derived from alignment at MCQH01000217:191861..193120- (Aspergillus niger ATCC 10864)
ATGCCCTTCTTTAGAGCTAAATCAAGCAAACGTCAAAGCATGTTCGTAAA
ATGGCAATTTCTGGTCCTCGGGGCCATTCCGATGATTCCGGCATACCCTT
CTGGTGCTGCTTATAAAGGCGGGTTTGAATGGGACTCGACGAAATACTTG
TTCGTGCTTGCTCTCATTGATGGCCGCATATGGATATCCGGTAGAGAGTT
GCTGATACATATGCTAGAATCGCCTTCGGTGACTCGTATACATATGTTCA
AGGGACAGACGGGCTACAGAACTATAGTTTCATCGGGGATTTACAGAACT
TTGCATATGACCCACACACATTGCTGACTGACAAGATTGTCCAGAACCAG
GTGACAACCATTCCTCTTTTTGAAATATACTCGCACCCATTTGAAGTGTT
GCTGATGCATTCATGAAATGCAGACTGCCACTGCAGAGGGCGGTCCCAAT
TGGGTGGAATACCTGACGGGTTGCGGTCTCGAGGAGGGACTCACCTCACC
CTTCGACTGCGACCAACAGCTATGGGACTTCGCCTTTGCAGGATCAGACA
TCTCAGTTGAATAGTACGCATCTGCAAGCCATACATCATCTTGCATACTT
CCTCTAACCCAGTACAGCACCCCACTCCACCACAACTTCACCGTCTCGCT
TGTCAACCAAGTTAAGCAATTCAACACCTACGCGCAACCCGTGCTGAAGA
AGACCGTAGACCAGTCACACGCACTAGTAGCCATCTGGATCGGCATCAAC
GACATCGGCGACAGTTCGAAATACGATGTCGACTTCCCGACCTTCTACAA
CGAGCTCATGAATACGCTGTTTTCTTCCGTCCAGACTATCTACTCTCAGG
GATACCGTTCCTATCTCTTCATGAACCTTCCCCCGCTAGACCGCAGACCA
GGAAACCTAGGTAGCGCTGATCCCAGTCCCAACGCAACACAAATCACCTG
GTACAATGATGCACTGGCGCAGCATGCCAGTGCGTTCCATGATCGCTACG
CCGACACCAATGTGATGTTGTTTGACGCGCATAGCGAACTCAGCTATATT
TTGGATAACCCGGGTGAGTTCGGCATTGTGAATATCACGAACTTCTGTGC
GGGATATGATCAGCCGGATATCGCGTGGAATTATCAGGCGTATGGATGTC
CTACGCCGTTGGATACTTATTTCTGGTATAATTCGGGGCATATGACGAGC
CATGTTCATGAGATCTTGGCTGGTGCTGTGGAGAGGAAGTTGGAGGAGTG
GTCGGATTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000217:191861..193120-

>ATCC10864_009699-T1 ID=ATCC10864_009699-T1|Name=ATCC10864_009699-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4260bp|location=Sequence derived from alignment at MCQH01000217:191861..193120- (Aspergillus niger ATCC 10864)
CACCCCACTCCACCACAACTTCACCGTCTCGCTTGTCAACCAAGTTAAGC
AATTCAACACCTACGCGCAACCCGTGCTGAAGAAGACCGTAGACCAGTCA
CACGCACTAGTAGCCATCTGGATCGGCATCAACGACATCGGCGACAGTTC
GAAATACGATGTCGACTTCCCGACCTTCTACAACGAGCTCATGAATACGC
TGTTTTCTTCCGTCCAGACTATCTACTCTCAGGGATACCGTTCCTATCTC
TTCATGAACCTTCCCCCGCTAGACCGCAGACCAGGAAACCTAGGTAGCGC
TGATCCCAGTCCCAACGCAACACAAATCACCTGGTACAATGATGCACTGG
CGCAGCATGCCAGTGCGTTCCATGATCGCTACGCCGACACCAATGTGATG
TTGTTTGACGCGCATAGCGAACTCAGCTATATTTTGGATAACCCGGGTGA
GTTCGGCATTGTGAATATCACGAACTTCTGTGCGGGATATGATCAGCCGG
ATATCGCGTGGAATTATCAGGCGTATGGATGTCCTACGCCGTTGGATACT
TATTTCTGGTATAATTCGGGGCATATGACGAGCCATGTTCATGAGATCTT
GGCTGGTGCTGTGGAGAGGAAGTTGGAGGAGTGGTCGGATTGAACTGCCA
CTGCAGAGGGCGGTCCCAATTGGGTGGAATACCTGACGGGTTGCGGTCTC
GAGGAGGGACTCACCTCACCCTTCGACTGCGACCAACAGCTATGGGACTT
CGCCTTTGCAGGATCAGACATCTCAGTTGAATAAATCGCCTTCGGTGACT
CGTATACATATGTTCAAGGGACAGACGGGCTACAGAACTATAGTTTCATC
GGGGATTTACAGAACTTTGCATATGACCCACACACATTGCTGACTGACAA
GATTGTCCAGAACCAGATGCCCTTCTTTAGAGCTAAATCAAGCAAACGTC
AAAGCATGTTCGTAAAATGGCAATTTCTGGTCCTCGGGGCCATTCCGATG
ATTCCGGCATACCCTTCTGGTGCTGCTTATAAAGGCGGGTTTGAATGGGA
CTCGACGAAATACTTCACCCCACTCCACCACAACTTCACCGTCTCGCTTG
TCAACCAAGTTAAGCAATTCAACACCTACGCGCAACCCGTGCTGAAGAAG
ACCGTAGACCAGTCACACGCACTAGTAGCCATCTGGATCGGCATCAACGA
CATCGGCGACAGTTCGAAATACGATGTCGACTTCCCGACCTTCTACAACG
AGCTCATGAATACGCTGTTTTCTTCCGTCCAGACTATCTACTCTCAGGGA
TACCGTTCCTATCTCTTCATGAACCTTCCCCCGCTAGACCGCAGACCAGG
AAACCTAGGTAGCGCTGATCCCAGTCCCAACGCAACACAAATCACCTGGT
ACAATGATGCACTGGCGCAGCATGCCAGTGCGTTCCATGATCGCTACGCC
GACACCAATGTGATGTTGTTTGACGCGCATAGCGAACTCAGCTATATTTT
GGATAACCCGGGTGAGTTCGGCATTGTGAATATCACGAACTTCTGTGCGG
GATATGATCAGCCGGATATCGCGTGGAATTATCAGGCGTATGGATGTCCT
ACGCCGTTGGATACTTATTTCTGGTATAATTCGGGGCATATGACGAGCCA
TGTTCATGAGATCTTGGCTGGTGCTGTGGAGAGGAAGTTGGAGGAGTGGT
CGGATTGAACTGCCACTGCAGAGGGCGGTCCCAATTGGGTGGAATACCTG
ACGGGTTGCGGTCTCGAGGAGGGACTCACCTCACCCTTCGACTGCGACCA
ACAGCTATGGGACTTCGCCTTTGCAGGATCAGACATCTCAGTTGAATAAA
TCGCCTTCGGTGACTCGTATACATATGTTCAAGGGACAGACGGGCTACAG
AACTATAGTTTCATCGGGGATTTACAGAACTTTGCATATGACCCACACAC
ATTGCTGACTGACAAGATTGTCCAGAACCAGATGCCCTTCTTTAGAGCTA
AATCAAGCAAACGTCAAAGCATGTTCGTAAAATGGCAATTTCTGGTCCTC
GGGGCCATTCCGATGATTCCGGCATACCCTTCTGGTGCTGCTTATAAAGG
CGGGTTTGAATGGGACTCGACGAAATACTTCACCCCACTCCACCACAACT
TCACCGTCTCGCTTGTCAACCAAGTTAAGCAATTCAACACCTACGCGCAA
CCCGTGCTGAAGAAGACCGTAGACCAGTCACACGCACTAGTAGCCATCTG
GATCGGCATCAACGACATCGGCGACAGTTCGAAATACGATGTCGACTTCC
CGACCTTCTACAACGAGCTCATGAATACGCTGTTTTCTTCCGTCCAGACT
ATCTACTCTCAGGGATACCGTTCCTATCTCTTCATGAACCTTCCCCCGCT
AGACCGCAGACCAGGAAACCTAGGTAGCGCTGATCCCAGTCCCAACGCAA
CACAAATCACCTGGTACAATGATGCACTGGCGCAGCATGCCAGTGCGTTC
CATGATCGCTACGCCGACACCAATGTGATGTTGTTTGACGCGCATAGCGA
ACTCAGCTATATTTTGGATAACCCGGGTGAGTTCGGCATTGTGAATATCA
CGAACTTCTGTGCGGGATATGATCAGCCGGATATCGCGTGGAATTATCAG
GCGTATGGATGTCCTACGCCGTTGGATACTTATTTCTGGTATAATTCGGG
GCATATGACGAGCCATGTTCATGAGATCTTGGCTGGTGCTGTGGAGAGGA
AGTTGGAGGAGTGGTCGGATTGAACTGCCACTGCAGAGGGCGGTCCCAAT
TGGGTGGAATACCTGACGGGTTGCGGTCTCGAGGAGGGACTCACCTCACC
CTTCGACTGCGACCAACAGCTATGGGACTTCGCCTTTGCAGGATCAGACA
TCTCAGTTGAATAAATCGCCTTCGGTGACTCGTATACATATGTTCAAGGG
ACAGACGGGCTACAGAACTATAGTTTCATCGGGGATTTACAGAACTTTGC
ATATGACCCACACACATTGCTGACTGACAAGATTGTCCAGAACCAGATGC
CCTTCTTTAGAGCTAAATCAAGCAAACGTCAAAGCATGTTCGTAAAATGG
CAATTTCTGGTCCTCGGGGCCATTCCGATGATTCCGGCATACCCTTCTGG
TGCTGCTTATAAAGGCGGGTTTGAATGGGACTCGACGAAATACTTCACCC
CACTCCACCACAACTTCACCGTCTCGCTTGTCAACCAAGTTAAGCAATTC
AACACCTACGCGCAACCCGTGCTGAAGAAGACCGTAGACCAGTCACACGC
ACTAGTAGCCATCTGGATCGGCATCAACGACATCGGCGACAGTTCGAAAT
ACGATGTCGACTTCCCGACCTTCTACAACGAGCTCATGAATACGCTGTTT
TCTTCCGTCCAGACTATCTACTCTCAGGGATACCGTTCCTATCTCTTCAT
GAACCTTCCCCCGCTAGACCGCAGACCAGGAAACCTAGGTAGCGCTGATC
CCAGTCCCAACGCAACACAAATCACCTGGTACAATGATGCACTGGCGCAG
CATGCCAGTGCGTTCCATGATCGCTACGCCGACACCAATGTGATGTTGTT
TGACGCGCATAGCGAACTCAGCTATATTTTGGATAACCCGGGTGAGTTCG
GCATTGTGAATATCACGAACTTCTGTGCGGGATATGATCAGCCGGATATC
GCGTGGAATTATCAGGCGTATGGATGTCCTACGCCGTTGGATACTTATTT
CTGGTATAATTCGGGGCATATGACGAGCCATGTTCATGAGATCTTGGCTG
GTGCTGTGGAGAGGAAGTTGGAGGAGTGGTCGGATTGAACTGCCACTGCA
GAGGGCGGTCCCAATTGGGTGGAATACCTGACGGGTTGCGGTCTCGAGGA
GGGACTCACCTCACCCTTCGACTGCGACCAACAGCTATGGGACTTCGCCT
TTGCAGGATCAGACATCTCAGTTGAATAAATCGCCTTCGGTGACTCGTAT
ACATATGTTCAAGGGACAGACGGGCTACAGAACTATAGTTTCATCGGGGA
TTTACAGAACTTTGCATATGACCCACACACATTGCTGACTGACAAGATTG
TCCAGAACCAGATGCCCTTCTTTAGAGCTAAATCAAGCAAACGTCAAAGC
ATGTTCGTAAAATGGCAATTTCTGGTCCTCGGGGCCATTCCGATGATTCC
GGCATACCCTTCTGGTGCTGCTTATAAAGGCGGGTTTGAATGGGACTCGA
CGAAATACTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009699ATCC10864_009699Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009699-T1ATCC10864_009699-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009699-T1.cdsATCC10864_009699-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009699-T1.exon4ATCC10864_009699-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009699-T1.exon3ATCC10864_009699-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009699-T1.exon2ATCC10864_009699-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009699-T1.exon1ATCC10864_009699-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00657
InterProIPR036514
Properties
Property NameValue
NoteCAZy:CE16
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:191861..193120 -
Powered by Drupal