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ATCC10864_009719-T1, ATCC10864_009719-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009719-T1
Unique NameATCC10864_009719-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:259163..259958+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009719-T1 ID=ATCC10864_009719-T1|Name=ATCC10864_009719-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=796bp|location=Sequence derived from alignment at MCQH01000217:259163..259958+ (Aspergillus niger ATCC 10864)
ATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCA
AACCTCGAAGCTGGCTAGGGTACGTATCTGTACTTCCTTTTGGACCCTTT
TTCACAGTGTCTGTCGCAATCCTGCAACCAGCGCAGACGACGTGCCCATC
CGCTACCCCAGCAGACAACACCAACCCACGGACCATGACATGACATGATA
AGCTAACTAATACCTCGCACAGCAATACCAAACCTACCTCGACGCCTCCA
CCCCATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTC
TTCTTCCTGAGAATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACAC
CCTCGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGT
TCGACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCC
GCTCCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCG
CCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTA
TCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGG
CCTGTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCAGTACGTA
TACCAGTTCTGCTTATCTGTGGTGGGAGGCGAAACCGGCAGAAGGCTAAC
CCAAATTCACTACTAGTGCGCCGCCAGATCCAGCACATGATCAAGTACCG
CTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATAA
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Coding sequence (CDS) from alignment at MCQH01000217:259163..259958+

>ATCC10864_009719-T1 ID=ATCC10864_009719-T1|Name=ATCC10864_009719-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1710bp|location=Sequence derived from alignment at MCQH01000217:259163..259958+ (Aspergillus niger ATCC 10864)
ATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCA
AACCTCGAAGCTGGCTAGGCAATACCAAACCTACCTCGACGCCTCCACCC
CATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTCTTC
TTCCTGAGAATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACACCCT
CGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGTTCG
ACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCCGCT
CCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCGCCG
TCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTATCG
GCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGGCCT
GTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCATGCGCCGCCA
GATCCAGCACATGATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGA
CGCGGTACGGCCGGTCATAAATGGACGTTCCTGAGCCTGAGCAGACGCCT
TTCACGGCCGTGACGGCGCAAACCTCGAAGCTGGCTAGGCAATACCAAAC
CTACCTCGACGCCTCCACCCCATTCACAGCCTACCGCTGGACCGGCACCG
TCGTCCTGCTCCTCGTCTTCTTCCTGAGAATCGTCCTCGCCCAGGGATGG
TACATCGTGGCCTACACCCTCGGCATCTACCTGCTCAACCTCTTCCTCCT
CTTCCTGCAACCCAAGTTCGACCCCTCCCTGACGCAGGATGAGGGTCTGG
AAGACGGCGACGCCGCCGCTCCCAGCCTGCCCATGAAGCAAGACGACGAA
TTCCGTCCTTTCATCCGCCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGC
CACTCGCGCCATTCTTATCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCG
ATATCCCGGTGTTCTGGCCTGTCTTGGTGGTCTACTGGATTATTCTCTTT
GTGTTGACCATGCGCCGCCAGATCCAGCACATGATCAAGTACCGCTACGT
GCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATAAATGGACGTTC
CTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCAAACCTCGAAG
CTGGCTAGGCAATACCAAACCTACCTCGACGCCTCCACCCCATTCACAGC
CTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTCTTCTTCCTGAGAA
TCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACACCCTCGGCATCTAC
CTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGTTCGACCCCTCCCT
GACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCCGCTCCCAGCCTGC
CCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCGCCGTCTCCCCGAG
TTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTATCGGCTTCGTTTG
CTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGGCCTGTCTTGGTGG
TCTACTGGATTATTCTCTTTGTGTTGACCATGCGCCGCCAGATCCAGCAC
ATGATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGG
CCGGTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RER1ATCC10864_009719Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009719-T1.exon1ATCC10864_009719-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009719-T1.exon2ATCC10864_009719-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009719-T1.exon3ATCC10864_009719-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009719-T1.cdsATCC10864_009719-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009719-T1ATCC10864_009719-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004932
PFAMPF03248
Properties
Property NameValue
NoteBUSCO:EOG09265ANI
Productretention in endoplasmic reticulum protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:259163..259958 +
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