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ATCC10864_009724-T1, ATCC10864_009724-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009724-T1
Unique NameATCC10864_009724-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:272726..273560-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009724-T1 ID=ATCC10864_009724-T1|Name=ATCC10864_009724-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=835bp|location=Sequence derived from alignment at MCQH01000217:272726..273560- (Aspergillus niger ATCC 10864)
ATGGGAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGA
GATTCGCATCCTCATCCTCGGTCTGGTAGGTATAATCATGCTTTGGCACT
AGGCATCAAGCTACTAGCGAGTTTCATACTAACCCGCGCTCCCATCTCTA
GGATAACGCCGGAAAAACAACACTTCTTTACAGACTCAAGGTGCGTATAG
CCTTGCAGAGCTACTCTACTGTCAGCTAGAGGCCAGTGTTAATGTGCCAG
GAATAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGT
CGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGTAAGTCAAC
GCTACAATACCATTATAGTTGCCATTTGGTAGAGAGAAAGTACCTGAGGT
TGCTGACTTTCGCTGTCGTTCAGGATCTCGGAGGTCAAACGTCCATTCGA
CCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCAT
TGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCGG
CTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGCC
AACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGGC
TCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGCT
CTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGGTA
TGTGCATCTTCAAGCTCCTTTCCTTCACTTTGGATAAGTACTGACCTTTT
ATACACAGCAAACCCTTCAGTCTGAAAACGCATGA
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Coding sequence (CDS) from alignment at MCQH01000217:272726..273560-

>ATCC10864_009724-T1 ID=ATCC10864_009724-T1|Name=ATCC10864_009724-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2745bp|location=Sequence derived from alignment at MCQH01000217:272726..273560- (Aspergillus niger ATCC 10864)
CAAACCCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCAT
TCGACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCG
TCATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTA
GCGGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATT
TGCCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAG
AGGCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCA
TGCTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGT
GATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAAT
CGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAA
ACAACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTG
GTCCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGC
AAACCCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATT
CGACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGT
CATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAG
CGGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTT
GCCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGA
GGCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCAT
GCTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTG
ATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATC
GGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAA
CAACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGG
TCCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCA
AACCCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTC
GACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTC
ATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGC
GGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTG
CCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAG
GCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATG
CTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGA
TTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCG
GTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAAC
AACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGT
CCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCAA
ACCCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTCG
ACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCA
TTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCG
GCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGC
CAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGG
CTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGC
TCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGAT
TGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCGG
TGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAACA
ACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGTC
CTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCAAA
CCCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTCGA
CCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCAT
TGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCGG
CTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGCC
AACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGGC
TCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGCT
CTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGATT
GGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCGGT
GACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAACAA
CACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGTCC
TTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARL1ATCC10864_009724Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009724-T1ATCC10864_009724-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009724-T1.cdsATCC10864_009724-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009724-T1.exon5ATCC10864_009724-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_009724-T1.exon4ATCC10864_009724-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009724-T1.exon3ATCC10864_009724-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009724-T1.exon2ATCC10864_009724-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009724-T1.exon1ATCC10864_009724-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF09439
InterProIPR027417
PFAMPF00025
PFAMPF00071
PFAMPF08477
PFAMPF01926
InterProIPR005225
InterProIPR006689
Properties
Property NameValue
ProductArf GTPase arl1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:272726..273560 -
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