You are here

ATCC10864_009735-T1, ATCC10864_009735-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009735-T1
Unique NameATCC10864_009735-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:298656..299380-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009735-T1 ID=ATCC10864_009735-T1|Name=ATCC10864_009735-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=725bp|location=Sequence derived from alignment at MCQH01000217:298656..299380- (Aspergillus niger ATCC 10864)
ATGCCAGAAGAAGAGCCGTCTCTGAACATCCCCTCTCTCCTCACCCTCGC TGTGGTGTCATTCTTCGTGCTGCGATGGTTTCTCAACCGCGATGGAGGAG AGGCCGGACCCGGCAGCAGTCGCAGTCGGGCGCGAGGCACCGTCGACCCA GCCCAAGTCGAGCAAATATCCCAGATGTTCCCTCAGCTCAGCGCCCGTGA GATCATGTGGGATTTGCAGCGCAACGGGGGAAGTGTTGCGGCGACAACGG AGAGAATCCTGACCGGTCGGGGCCTGGAAGTGGTGAGTTTATTCCCTTAT TCCTTCCTCTCTTGGATGCATCTTGACCTGCGTCGCTGGTCATTCATCAT CTGCTCCTCTTTCTTCCCCTATCTCGTTCCCCCGCATTGAGTCAGATGCA TAGCCAGCTAACCCAAACTACCTTGTAGCCGCCCCCATCCTTCCAACCTC AGATCGCTATCCCCACTACGGCCCCTGTTCAATCACAACCCACTCAAACG GCGACCTCCAAGGCCGATGCCCAGGACCTGATCTCCCGCTATAATCTCCG CGCGAAACTTGAGGCCGAGAACAGCGCCGCCGAGTCCGCACCGTCGCAGG CTTCTTCCACGACAGGCTGGTCGCAGAGCAAGGAGGAGCGCCAGCGCTTG CTGCAGAAGCGGAGGGACGAGATGATTCTGGCGGCGCGGAGGAAGATGAT GCAGAAGGATCAGGCTGCTCAATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000217:298656..299380-

>ATCC10864_009735-T1 ID=ATCC10864_009735-T1|Name=ATCC10864_009735-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1158bp|location=Sequence derived from alignment at MCQH01000217:298656..299380- (Aspergillus niger ATCC 10864)
CCGCCCCCATCCTTCCAACCTCAGATCGCTATCCCCACTACGGCCCCTGT
TCAATCACAACCCACTCAAACGGCGACCTCCAAGGCCGATGCCCAGGACC
TGATCTCCCGCTATAATCTCCGCGCGAAACTTGAGGCCGAGAACAGCGCC
GCCGAGTCCGCACCGTCGCAGGCTTCTTCCACGACAGGCTGGTCGCAGAG
CAAGGAGGAGCGCCAGCGCTTGCTGCAGAAGCGGAGGGACGAGATGATTC
TGGCGGCGCGGAGGAAGATGATGCAGAAGGATCAGGCTGCTCAATGAATG
CCAGAAGAAGAGCCGTCTCTGAACATCCCCTCTCTCCTCACCCTCGCTGT
GGTGTCATTCTTCGTGCTGCGATGGTTTCTCAACCGCGATGGAGGAGAGG
CCGGACCCGGCAGCAGTCGCAGTCGGGCGCGAGGCACCGTCGACCCAGCC
CAAGTCGAGCAAATATCCCAGATGTTCCCTCAGCTCAGCGCCCGTGAGAT
CATGTGGGATTTGCAGCGCAACGGGGGAAGTGTTGCGGCGACAACGGAGA
GAATCCTGACCGGTCGGGGCCTGGAAGTGCCGCCCCCATCCTTCCAACCT
CAGATCGCTATCCCCACTACGGCCCCTGTTCAATCACAACCCACTCAAAC
GGCGACCTCCAAGGCCGATGCCCAGGACCTGATCTCCCGCTATAATCTCC
GCGCGAAACTTGAGGCCGAGAACAGCGCCGCCGAGTCCGCACCGTCGCAG
GCTTCTTCCACGACAGGCTGGTCGCAGAGCAAGGAGGAGCGCCAGCGCTT
GCTGCAGAAGCGGAGGGACGAGATGATTCTGGCGGCGCGGAGGAAGATGA
TGCAGAAGGATCAGGCTGCTCAATGAATGCCAGAAGAAGAGCCGTCTCTG
AACATCCCCTCTCTCCTCACCCTCGCTGTGGTGTCATTCTTCGTGCTGCG
ATGGTTTCTCAACCGCGATGGAGGAGAGGCCGGACCCGGCAGCAGTCGCA
GTCGGGCGCGAGGCACCGTCGACCCAGCCCAAGTCGAGCAAATATCCCAG
ATGTTCCCTCAGCTCAGCGCCCGTGAGATCATGTGGGATTTGCAGCGCAA
CGGGGGAAGTGTTGCGGCGACAACGGAGAGAATCCTGACCGGTCGGGGCC
TGGAAGTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043130ubiquitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009735ATCC10864_009735Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009735-T1ATCC10864_009735-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009735-T1.cdsATCC10864_009735-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009735-T1.exon2ATCC10864_009735-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009735-T1.exon1ATCC10864_009735-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR003892
PFAMPF02845
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:298656..299380 -