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ATCC10864_009744-T1, ATCC10864_009744-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009744-T1
Unique NameATCC10864_009744-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:316869..317715+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009744-T1 ID=ATCC10864_009744-T1|Name=ATCC10864_009744-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=847bp|location=Sequence derived from alignment at MCQH01000217:316869..317715+ (Aspergillus niger ATCC 10864)
ATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCC
GCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTA
TGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTT
GCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCA
CCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCTA
AGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCAT
GGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGAC
ATACGACATTGAATGCGGTTAGTTTGGAACCATATAAGGCTGTGGTGACG
TTGTGATGCTTACTATTGATCGTTTAGGCCGCTCGTGGTCTATTCAGGAA
CTTCGTGAGAAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGT
CAAGGAGCGCAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGA
AGGCTGGTTATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGGTAGGT
TCAGTCCTGTTGCTGGTTTATGTTTCAAGGCTCATGAAAGCTACAAACGT
CTTACTACGAAAATTATATACAACATTAATGGGCTGCTGCTCGCCTTGGT
GCTCAATGTGCTAATGAATGGCTTTCTTAGATCCGCGTCACGCAAAACGG
CATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGCACAGC
GTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000217:316869..317715+

>ATCC10864_009744-T1 ID=ATCC10864_009744-T1|Name=ATCC10864_009744-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1953bp|location=Sequence derived from alignment at MCQH01000217:316869..317715+ (Aspergillus niger ATCC 10864)
ATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCC
GCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTA
TGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTT
GCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCA
CCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCTA
AGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCAT
GGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGAC
ATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGAGA
AGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGCGC
AATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGTTA
TGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCAAA
ACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGCA
CAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGTA
AATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCC
CGCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCT
ATGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGT
TGCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTC
ACCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCT
AAGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCA
TGGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGA
CATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGAG
AAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGCG
CAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGTT
ATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCAA
AACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGC
ACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGT
AAATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTC
CCGCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTC
TATGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTG
TTGCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATT
CACCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCC
TAAGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACC
ATGGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCG
ACATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGA
GAAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGC
GCAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGT
TATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCA
AAACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGG
CACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAG
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005761mitochondrial ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MRPL4ATCC10864_009744Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009744-T1.exon1ATCC10864_009744-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009744-T1.exon2ATCC10864_009744-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009744-T1.exon3ATCC10864_009744-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009744-T1.cdsATCC10864_009744-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009744-T1ATCC10864_009744-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR038340
PFAMPF06984
InterProIPR010729
Properties
Property NameValue
NoteBUSCO:EOG09264BWL
Product54S ribosomal protein L4 mitochondrial
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:316869..317715 +
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